RNA–Protein interactions for RNA: ENST00000397102.5

SEC13-206, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-206ENST00000397102 CTDNEP1O95476 244 aa16.39■□□□□ 0.21
SEC13-206ENST00000397102 CPB1P15086 417 aa16.39■□□□□ 0.21
SEC13-206ENST00000397102 KCNE1P15382 129 aa16.39■□□□□ 0.21
SEC13-206ENST00000397102 RPA1P27694 616 aa16.39■□□□□ 0.21
SEC13-206ENST00000397102 SYNPOQ8N3V7 929 aa16.39■□□□□ 0.21
SEC13-206ENST00000397102 DDX12PQ92771 950 aa16.39■□□□□ 0.21
SEC13-206ENST00000397102 LRRC3Q9BY71 257 aa16.39■□□□□ 0.21
SEC13-206ENST00000397102 TMEM60Q9H2L4 133 aa16.39■□□□□ 0.21
SEC13-206ENST00000397102 RALYQ9UKM9 306 aaKnown RBP16.39■□□□□ 0.21
SEC13-206ENST00000397102 YIPF1Q9Y548 306 aa16.39■□□□□ 0.21
SEC13-206ENST00000397102 FAM208BQ5VWN6 2430 aa16.38■□□□□ 0.21
SEC13-206ENST00000397102 K7ERI5 159 aa16.38■□□□□ 0.21
SEC13-206ENST00000397102 MCM4P33991 863 aa16.38■□□□□ 0.21
SEC13-206ENST00000397102 OSTNP61366 133 aa16.38■□□□□ 0.21
SEC13-206ENST00000397102 PLD1Q13393 1074 aa16.38■□□□□ 0.21
SEC13-206ENST00000397102 CCINQ13939 588 aa16.38■□□□□ 0.21
SEC13-206ENST00000397102 ZNF568Q3ZCX4 644 aa16.38■□□□□ 0.21
SEC13-206ENST00000397102 ARHGAP29Q52LW3 1261 aa16.38■□□□□ 0.21
SEC13-206ENST00000397102 STPG1Q5TH74 334 aa16.38■□□□□ 0.21
SEC13-206ENST00000397102 RNF19BQ6ZMZ0 732 aa16.38■□□□□ 0.21
SEC13-206ENST00000397102 TMC8Q8IU68 726 aa16.38■□□□□ 0.21
SEC13-206ENST00000397102 APPL2Q8NEU8 664 aa16.38■□□□□ 0.21
SEC13-206ENST00000397102 BEST2Q8NFU1 509 aa16.38■□□□□ 0.21
SEC13-206ENST00000397102 GAB3Q8WWW8 586 aa16.38■□□□□ 0.21
SEC13-206ENST00000397102 KIFAP3Q92845 792 aa16.38■□□□□ 0.21
SEC13-206ENST00000397102 ACO2Q99798 780 aaKnown RBP16.38■□□□□ 0.21
SEC13-206ENST00000397102 PTPRHQ9HD43 1115 aa16.38■□□□□ 0.21
SEC13-206ENST00000397102 RXFP3Q9NSD7 469 aa16.38■□□□□ 0.21
SEC13-206ENST00000397102 CNTN3Q9P232 1028 aa16.38■□□□□ 0.21
SEC13-206ENST00000397102 PHLPP2Q6ZVD8 1323 aa16.38■□□□□ 0.21
SEC13-206ENST00000397102 EML5Q05BV3 1969 aa16.37■□□□□ 0.21
SEC13-206ENST00000397102 A0A1W2PRU2 124 aa16.37■□□□□ 0.21
SEC13-206ENST00000397102 BTBD18B2RXH4 712 aa16.37■□□□□ 0.21
SEC13-206ENST00000397102 PROS1P07225 676 aa16.37■□□□□ 0.21
SEC13-206ENST00000397102 FDPSP14324 419 aaKnown RBP16.37■□□□□ 0.21
SEC13-206ENST00000397102 HOXC13P31276 330 aa16.37■□□□□ 0.21
SEC13-206ENST00000397102 RAP1GAPP47736 663 aa16.37■□□□□ 0.21
SEC13-206ENST00000397102 PON2Q15165 354 aa16.37■□□□□ 0.21
SEC13-206ENST00000397102 CCDC6Q16204 474 aa16.37■□□□□ 0.21
SEC13-206ENST00000397102 CACNA2D4Q7Z3S7 1137 aa16.37■□□□□ 0.21
SEC13-206ENST00000397102 HAUS6Q7Z4H7 955 aa16.37■□□□□ 0.21
SEC13-206ENST00000397102 ARID3BQ8IVW6 561 aaPredicted RBP16.37■□□□□ 0.21
SEC13-206ENST00000397102 ERMNQ8TAM6 284 aa16.37■□□□□ 0.21
SEC13-206ENST00000397102 TBC1D32Q96NH3 1257 aa16.37■□□□□ 0.21
SEC13-206ENST00000397102 ACAP3Q96P50 834 aa16.37■□□□□ 0.21
SEC13-206ENST00000397102 OBP2AQ9NY56 170 aa16.37■□□□□ 0.21
SEC13-206ENST00000397102 GTSE1Q9NYZ3 720 aa16.37■□□□□ 0.21
SEC13-206ENST00000397102 TPCN1Q9ULQ1 816 aa16.37■□□□□ 0.21
SEC13-206ENST00000397102 PCDHB8Q9UN66 801 aa16.37■□□□□ 0.21
SEC13-206ENST00000397102 SDK1Q7Z5N4 2213 aa16.37■□□□□ 0.21
SEC13-206ENST00000397102 CCDC163A0A0D9SF12 145 aa16.36■□□□□ 0.21
SEC13-206ENST00000397102 RPP40O75818 363 aaKnown RBP16.36■□□□□ 0.21
SEC13-206ENST00000397102 KCNK5O95279 499 aa16.36■□□□□ 0.21
SEC13-206ENST00000397102 MUTP22033 750 aa16.36■□□□□ 0.21
SEC13-206ENST00000397102 PLA2G2CQ5R387 149 aa16.36■□□□□ 0.21
SEC13-206ENST00000397102 DIS3L2Q8IYB7 885 aaKnown RBP16.36■□□□□ 0.21
SEC13-206ENST00000397102 C18orf25Q96B23 403 aaPredicted RBP16.36■□□□□ 0.21
SEC13-206ENST00000397102 LSM14BQ9BX40 385 aaKnown RBP16.36■□□□□ 0.21
SEC13-206ENST00000397102 MRPL4Q9BYD3 311 aaKnown RBP16.36■□□□□ 0.21
SEC13-206ENST00000397102 DNAJC25Q9H1X3 360 aa16.36■□□□□ 0.21
SEC13-206ENST00000397102 POLD4Q9HCU8 107 aa16.36■□□□□ 0.21
SEC13-206ENST00000397102 PCDHGA5Q9Y5G8 931 aa16.36■□□□□ 0.21
SEC13-206ENST00000397102 BAHCC1Q9P281 2608 aa16.35■□□□□ 0.21
SEC13-206ENST00000397102 DPYSL4O14531 572 aa16.35■□□□□ 0.21
SEC13-206ENST00000397102 EXTL3O43909 919 aa16.35■□□□□ 0.21
SEC13-206ENST00000397102 VNN2O95498 520 aa16.35■□□□□ 0.21
SEC13-206ENST00000397102 MCF2P10911 925 aa16.35■□□□□ 0.21
SEC13-206ENST00000397102 MARCKSP29966 332 aaPredicted RBP16.35■□□□□ 0.21
SEC13-206ENST00000397102 MCM7P33993 719 aa16.35■□□□□ 0.21
SEC13-206ENST00000397102 EPHB3P54753 998 aa16.35■□□□□ 0.21
SEC13-206ENST00000397102 YWHAHQ04917 246 aaPredicted RBP16.35■□□□□ 0.21
SEC13-206ENST00000397102 STXBP5Q5T5C0 1151 aa16.35■□□□□ 0.21
SEC13-206ENST00000397102 KBTBD6Q86V97 674 aa16.35■□□□□ 0.21
SEC13-206ENST00000397102 TTC8Q8TAM2 541 aa16.35■□□□□ 0.21
SEC13-206ENST00000397102 ZFYVE19Q96K21 471 aa16.35■□□□□ 0.21
SEC13-206ENST00000397102 LRRC3BQ96PB8 259 aa16.35■□□□□ 0.21
SEC13-206ENST00000397102 MKNK1Q9BUB5 465 aa16.35■□□□□ 0.21
SEC13-206ENST00000397102 OXCT2Q9BYC2 517 aaPredicted RBP16.35■□□□□ 0.21
SEC13-206ENST00000397102 TMEM134Q9H6X4 195 aa16.35■□□□□ 0.21
SEC13-206ENST00000397102 CCDC169A6NNP5 214 aa16.34■□□□□ 0.21
SEC13-206ENST00000397102 AKAP3O75969 853 aa16.34■□□□□ 0.21
SEC13-206ENST00000397102 OAZ2O95190 189 aa16.34■□□□□ 0.21
SEC13-206ENST00000397102 CCDC192P0DO97 292 aa16.34■□□□□ 0.21
SEC13-206ENST00000397102 PROZP22891 400 aa16.34■□□□□ 0.21
SEC13-206ENST00000397102 PLCB2Q00722 1185 aa16.34■□□□□ 0.21
SEC13-206ENST00000397102 HAUS3Q68CZ6 603 aa16.34■□□□□ 0.21
SEC13-206ENST00000397102 GPIHBP1Q8IV16 184 aa16.34■□□□□ 0.21
SEC13-206ENST00000397102 PGLYRP2Q96PD5 576 aa16.34■□□□□ 0.21
SEC13-206ENST00000397102 TARS2Q9BW92 718 aaKnown RBP16.34■□□□□ 0.21
SEC13-206ENST00000397102 BHMT2Q9H2M3 363 aa16.34■□□□□ 0.21
SEC13-206ENST00000397102 CRISPLD1Q9H336 500 aa16.34■□□□□ 0.21
SEC13-206ENST00000397102 SH2B1Q9NRF2 756 aaPredicted RBP16.34■□□□□ 0.21
SEC13-206ENST00000397102 ASB3Q9Y575 518 aa16.34■□□□□ 0.21
SEC13-206ENST00000397102 M0QZQ0 153 aa16.33■□□□□ 0.2
SEC13-206ENST00000397102 ABLIM1O14639 778 aa16.33■□□□□ 0.2
SEC13-206ENST00000397102 MEFVO15553 781 aaPredicted RBP16.33■□□□□ 0.2
SEC13-206ENST00000397102 FGF19O95750 216 aa16.33■□□□□ 0.2
SEC13-206ENST00000397102 OR4Q2P0C623 313 aa16.33■□□□□ 0.2
SEC13-206ENST00000397102 MPLP40238 635 aa16.33■□□□□ 0.2
SEC13-206ENST00000397102 ALDH1A3P47895 512 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms