RNA–Protein interactions for RNA: ENST00000396578.7

COL4A3-202, Transcript of collagen type IV alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A3, Length 8,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-202ENST00000396578 CNGB3Q9NQW8 809 aa14.62□□□□□ -0.07
COL4A3-202ENST00000396578 ZNF839A8K0R7 811 aa14.62□□□□□ -0.07
COL4A3-202ENST00000396578 COPAP53621 1224 aa14.62□□□□□ -0.07
COL4A3-202ENST00000396578 NUP107P57740 925 aa14.62□□□□□ -0.07
COL4A3-202ENST00000396578 SYCP2LQ5T4T6 812 aa14.62□□□□□ -0.07
COL4A3-202ENST00000396578 VPS37AQ8NEZ2 397 aa14.62□□□□□ -0.07
COL4A3-202ENST00000396578 SRPK1Q96SB4 655 aaKnown RBP14.62□□□□□ -0.07
COL4A3-202ENST00000396578 KRT84Q9NSB2 600 aa14.62□□□□□ -0.07
COL4A3-202ENST00000396578 MYH10P35580 1976 aa14.62□□□□□ -0.07
COL4A3-202ENST00000396578 PDE5AO76074 875 aa14.62□□□□□ -0.07
COL4A3-202ENST00000396578 POLBP06746 335 aa14.62□□□□□ -0.07
COL4A3-202ENST00000396578 BRD2P25440 801 aaKnown RBP14.62□□□□□ -0.07
COL4A3-202ENST00000396578 RCN1Q15293 331 aa14.62□□□□□ -0.07
COL4A3-202ENST00000396578 ZNF560Q96MR9 790 aa14.62□□□□□ -0.07
COL4A3-202ENST00000396578 ECSITQ9BQ95 431 aa14.62□□□□□ -0.07
COL4A3-202ENST00000396578 CAAP1Q9H8G2 361 aa14.62□□□□□ -0.07
COL4A3-202ENST00000396578 HOXC10Q9NYD6 342 aa14.62□□□□□ -0.07
COL4A3-202ENST00000396578 SPRP35270 261 aaPredicted RBP14.62□□□□□ -0.07
COL4A3-202ENST00000396578 MCAMP43121 646 aa14.62□□□□□ -0.07
COL4A3-202ENST00000396578 STRBPQ96SI9 672 aaKnown RBP14.62□□□□□ -0.07
COL4A3-202ENST00000396578 SLC40A1Q9NP59 571 aa14.62□□□□□ -0.07
COL4A3-202ENST00000396578 GRID1Q9ULK0 1009 aa14.62□□□□□ -0.07
COL4A3-202ENST00000396578 MYO10Q9HD67 2058 aa14.62□□□□□ -0.07
COL4A3-202ENST00000396578 SLC16A3O15427 465 aaKnown RBP14.62□□□□□ -0.07
COL4A3-202ENST00000396578 RAD17O75943 681 aa14.62□□□□□ -0.07
COL4A3-202ENST00000396578 APOA4P06727 396 aa14.62□□□□□ -0.07
COL4A3-202ENST00000396578 MLNP12872 115 aa14.62□□□□□ -0.07
COL4A3-202ENST00000396578 TTLL4Q14679 1199 aa14.62□□□□□ -0.07
COL4A3-202ENST00000396578 PIH1D3Q9NQM4 214 aaKnown RBP14.62□□□□□ -0.07
COL4A3-202ENST00000396578 ARHGEF3Q9NR81 526 aa14.62□□□□□ -0.07
COL4A3-202ENST00000396578 ZC3H4Q9UPT8 1303 aaKnown RBP14.62□□□□□ -0.07
COL4A3-202ENST00000396578 CYP26A1O43174 497 aa14.62□□□□□ -0.07
COL4A3-202ENST00000396578 GRIK1P39086 918 aa14.62□□□□□ -0.07
COL4A3-202ENST00000396578 KCNJ6P48051 423 aa14.62□□□□□ -0.07
COL4A3-202ENST00000396578 CALML6Q8TD86 181 aa14.62□□□□□ -0.07
COL4A3-202ENST00000396578 GLMNQ92990 594 aa14.62□□□□□ -0.07
COL4A3-202ENST00000396578 APEX2Q9UBZ4 518 aa14.62□□□□□ -0.07
COL4A3-202ENST00000396578 USP17L15C9J2P7 530 aa14.61□□□□□ -0.07
COL4A3-202ENST00000396578 USP17L13C9JLJ4 530 aa14.61□□□□□ -0.07
COL4A3-202ENST00000396578 USP17L11C9JVI0 530 aa14.61□□□□□ -0.07
COL4A3-202ENST00000396578 USP17L18D6R9N7 530 aa14.61□□□□□ -0.07
COL4A3-202ENST00000396578 USP17L22D6RA61 530 aa14.61□□□□□ -0.07
COL4A3-202ENST00000396578 USP17L17D6RBQ6 530 aa14.61□□□□□ -0.07
COL4A3-202ENST00000396578 USP17L19D6RCP7 530 aa14.61□□□□□ -0.07
COL4A3-202ENST00000396578 USP17L20D6RJB6 530 aa14.61□□□□□ -0.07
COL4A3-202ENST00000396578 H2AFYO75367 372 aaKnown RBP14.61□□□□□ -0.07
COL4A3-202ENST00000396578 USP17L24Q0WX57 530 aa14.61□□□□□ -0.07
COL4A3-202ENST00000396578 USP17L6PQ6QN14 398 aa14.61□□□□□ -0.07
COL4A3-202ENST00000396578 EFL1Q7Z2Z2 1120 aaKnown RBP14.61□□□□□ -0.07
COL4A3-202ENST00000396578 ZNF786Q8N393 782 aa14.61□□□□□ -0.07
COL4A3-202ENST00000396578 DEPDC7Q96QD5 511 aa14.61□□□□□ -0.07
COL4A3-202ENST00000396578 LATS2Q9NRM7 1088 aa14.61□□□□□ -0.07
COL4A3-202ENST00000396578 C6orf203Q9P0P8 240 aaPredicted RBP14.61□□□□□ -0.07
COL4A3-202ENST00000396578 GABBR1Q9UBS5 961 aa14.61□□□□□ -0.07
COL4A3-202ENST00000396578 FBXO40Q9UH90 709 aa14.61□□□□□ -0.07
COL4A3-202ENST00000396578 ERVV-1B6SEH8 477 aa14.61□□□□□ -0.07
COL4A3-202ENST00000396578 RIC8BQ9NVN3 520 aa14.61□□□□□ -0.07
COL4A3-202ENST00000396578 BSDC1Q9NW68 430 aaPredicted RBP14.61□□□□□ -0.07
COL4A3-202ENST00000396578 ITIH6Q6UXX5 1313 aa14.61□□□□□ -0.07
COL4A3-202ENST00000396578 ADGRA3Q8IWK6 1321 aa14.61□□□□□ -0.07
COL4A3-202ENST00000396578 MAP3K13O43283 966 aa14.61□□□□□ -0.07
COL4A3-202ENST00000396578 AKT1P31749 480 aa14.61□□□□□ -0.07
COL4A3-202ENST00000396578 SOAT1P35610 550 aa14.61□□□□□ -0.07
COL4A3-202ENST00000396578 CTCFP49711 727 aaPredicted RBP14.61□□□□□ -0.07
COL4A3-202ENST00000396578 RGS4P49798 205 aa14.61□□□□□ -0.07
COL4A3-202ENST00000396578 ADRM1Q16186 407 aa14.61□□□□□ -0.07
COL4A3-202ENST00000396578 NUDT18Q6ZVK8 323 aa14.61□□□□□ -0.07
COL4A3-202ENST00000396578 COQ7Q99807 217 aa14.61□□□□□ -0.07
COL4A3-202ENST00000396578 KLHL25Q9H0H3 589 aa14.61□□□□□ -0.07
COL4A3-202ENST00000396578 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.61□□□□□ -0.07
COL4A3-202ENST00000396578 HERC5Q9UII4 1024 aaKnown RBP14.61□□□□□ -0.07
COL4A3-202ENST00000396578 CDC42BPGQ6DT37 1551 aa14.61□□□□□ -0.07
COL4A3-202ENST00000396578 CENPAP49450 140 aa14.61□□□□□ -0.07
COL4A3-202ENST00000396578 SNRPAP09012 282 aaKnown RBP14.61□□□□□ -0.07
COL4A3-202ENST00000396578 PSMC3P17980 439 aa14.61□□□□□ -0.07
COL4A3-202ENST00000396578 NCKAP1LP55160 1127 aa14.61□□□□□ -0.07
COL4A3-202ENST00000396578 MTF1Q14872 753 aa14.61□□□□□ -0.07
COL4A3-202ENST00000396578 TRMT2AQ8IZ69 625 aaKnown RBP14.61□□□□□ -0.07
COL4A3-202ENST00000396578 TRIM51Q9BSJ1 452 aa14.61□□□□□ -0.07
COL4A3-202ENST00000396578 V9GYQ6 96 aa14.61□□□□□ -0.07
COL4A3-202ENST00000396578 TRPC5OSA6NMA1 111 aa14.61□□□□□ -0.07
COL4A3-202ENST00000396578 E7ENQ6 273 aa14.61□□□□□ -0.07
COL4A3-202ENST00000396578 SOX11P35716 441 aa14.61□□□□□ -0.07
COL4A3-202ENST00000396578 PTPN12Q05209 780 aaKnown RBP14.61□□□□□ -0.07
COL4A3-202ENST00000396578 CRYMQ14894 314 aa14.61□□□□□ -0.07
COL4A3-202ENST00000396578 VEPH1Q14D04 833 aa14.61□□□□□ -0.07
COL4A3-202ENST00000396578 SWSAP1Q6NVH7 229 aa14.61□□□□□ -0.07
COL4A3-202ENST00000396578 CYB5R4Q7L1T6 521 aa14.61□□□□□ -0.07
COL4A3-202ENST00000396578 NSUN6Q8TEA1 469 aaKnown RBP14.61□□□□□ -0.07
COL4A3-202ENST00000396578 NDUFA13Q9P0J0 144 aa14.61□□□□□ -0.07
COL4A3-202ENST00000396578 PSMC5P62195 406 aa14.61□□□□□ -0.07
COL4A3-202ENST00000396578 LRRC8DQ7L1W4 858 aa14.61□□□□□ -0.07
COL4A3-202ENST00000396578 SNTNA6NMZ2 147 aa14.6□□□□□ -0.07
COL4A3-202ENST00000396578 DGKIO75912 1065 aa14.6□□□□□ -0.07
COL4A3-202ENST00000396578 TRIM49P0CI25 452 aa14.6□□□□□ -0.07
COL4A3-202ENST00000396578 TRIM49CP0CI26 452 aa14.6□□□□□ -0.07
COL4A3-202ENST00000396578 TARSP26639 723 aaKnown RBP14.6□□□□□ -0.07
COL4A3-202ENST00000396578 MED15Q96RN5 788 aa14.6□□□□□ -0.07
COL4A3-202ENST00000396578 CROCC2H7BZ55 1655 aa14.6□□□□□ -0.07
COL4A3-202ENST00000396578 UTYO14607 1347 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms