RNA–Protein interactions for RNA: ENST00000396548.5

TRIM39-204, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-204ENST00000396548 LINC01599Q8WXQ3 324 aa13.62□□□□□ -0.23
TRIM39-204ENST00000396548 HPDLQ96IR7 371 aa13.62□□□□□ -0.23
TRIM39-204ENST00000396548 FAM124BQ9H5Z6 455 aaPredicted RBP13.62□□□□□ -0.23
TRIM39-204ENST00000396548 RGS18Q9NS28 235 aa13.62□□□□□ -0.23
TRIM39-204ENST00000396548 KRT86O43790 486 aa13.62□□□□□ -0.23
TRIM39-204ENST00000396548 IPO7O95373 1038 aaKnown RBP13.62□□□□□ -0.23
TRIM39-204ENST00000396548 SLC39A5Q6ZMH5 540 aa13.62□□□□□ -0.23
TRIM39-204ENST00000396548 LRRC52Q8N7C0 313 aa13.62□□□□□ -0.23
TRIM39-204ENST00000396548 ZSWIM1Q9BR11 485 aa13.62□□□□□ -0.23
TRIM39-204ENST00000396548 APOL6Q9BWW8 343 aa13.62□□□□□ -0.23
TRIM39-204ENST00000396548 RNF19AQ9NV58 838 aa13.62□□□□□ -0.23
TRIM39-204ENST00000396548 UBQLN1Q9UMX0 589 aaKnown RBP13.62□□□□□ -0.23
TRIM39-204ENST00000396548 MYCP01106 439 aaPredicted RBP13.61□□□□□ -0.23
TRIM39-204ENST00000396548 TNFAIP3P21580 790 aa13.61□□□□□ -0.23
TRIM39-204ENST00000396548 LRPAP1P30533 357 aa13.61□□□□□ -0.23
TRIM39-204ENST00000396548 AFF1P51825 1210 aaKnown RBP13.61□□□□□ -0.23
TRIM39-204ENST00000396548 FAM189BP81408 668 aa13.61□□□□□ -0.23
TRIM39-204ENST00000396548 KIF5AQ12840 1032 aa13.61□□□□□ -0.23
TRIM39-204ENST00000396548 GLRA4Q5JXX5 417 aa13.61□□□□□ -0.23
TRIM39-204ENST00000396548 VPS36Q86VN1 386 aa13.61□□□□□ -0.23
TRIM39-204ENST00000396548 RBBP8NLQ8NC74 664 aaPredicted RBP13.61□□□□□ -0.23
TRIM39-204ENST00000396548 U2AF1L4Q8WU68 220 aaKnown RBP13.61□□□□□ -0.23
TRIM39-204ENST00000396548 PARP2Q9UGN5 583 aa13.61□□□□□ -0.23
TRIM39-204ENST00000396548 GUCA1BQ9UMX6 200 aa13.61□□□□□ -0.23
TRIM39-204ENST00000396548 GIT1Q9Y2X7 761 aa13.61□□□□□ -0.23
TRIM39-204ENST00000396548 TDRD15B5MCY1 1934 aaKnown RBP13.61□□□□□ -0.23
TRIM39-204ENST00000396548 SCN5AQ14524 2016 aa13.61□□□□□ -0.23
TRIM39-204ENST00000396548 KRT19P08727 400 aa13.61□□□□□ -0.23
TRIM39-204ENST00000396548 GZMAP12544 262 aa13.61□□□□□ -0.23
TRIM39-204ENST00000396548 UNGP13051 313 aaPredicted RBP13.61□□□□□ -0.23
TRIM39-204ENST00000396548 KRT5P13647 590 aa13.61□□□□□ -0.23
TRIM39-204ENST00000396548 USP8P40818 1118 aa13.61□□□□□ -0.23
TRIM39-204ENST00000396548 RAB27AP51159 221 aa13.61□□□□□ -0.23
TRIM39-204ENST00000396548 GNG11P61952 73 aa13.61□□□□□ -0.23
TRIM39-204ENST00000396548 INCA1Q0VD86 236 aa13.61□□□□□ -0.23
TRIM39-204ENST00000396548 TCEAL1Q15170 157 aa13.61□□□□□ -0.23
TRIM39-204ENST00000396548 TMEM270Q6UE05 265 aa13.61□□□□□ -0.23
TRIM39-204ENST00000396548 BEST2Q8NFU1 509 aa13.61□□□□□ -0.23
TRIM39-204ENST00000396548 SMYD3Q9H7B4 428 aa13.61□□□□□ -0.23
TRIM39-204ENST00000396548 MIOSQ9NXC5 875 aa13.61□□□□□ -0.23
TRIM39-204ENST00000396548 PCDHB4Q9Y5E5 795 aa13.61□□□□□ -0.23
TRIM39-204ENST00000396548 PITPNM1O00562 1244 aa13.61□□□□□ -0.23
TRIM39-204ENST00000396548 NBNO60934 754 aa13.61□□□□□ -0.23
TRIM39-204ENST00000396548 CYP1A1P04798 512 aaPredicted RBP13.61□□□□□ -0.23
TRIM39-204ENST00000396548 CFHP08603 1231 aa13.61□□□□□ -0.23
TRIM39-204ENST00000396548 WEE2P0C1S8 567 aa13.61□□□□□ -0.23
TRIM39-204ENST00000396548 SELPP16109 830 aa13.61□□□□□ -0.23
TRIM39-204ENST00000396548 PDE6CP51160 858 aa13.61□□□□□ -0.23
TRIM39-204ENST00000396548 BPIFB4P59827 614 aa13.61□□□□□ -0.23
TRIM39-204ENST00000396548 PKN2Q16513 984 aaKnown RBP13.61□□□□□ -0.23
TRIM39-204ENST00000396548 WDR72Q3MJ13 1102 aa13.61□□□□□ -0.23
TRIM39-204ENST00000396548 ZNF667Q5HYK9 610 aa13.61□□□□□ -0.23
TRIM39-204ENST00000396548 LRRC8DQ7L1W4 858 aa13.61□□□□□ -0.23
TRIM39-204ENST00000396548 SLC35F6Q8N357 371 aa13.61□□□□□ -0.23
TRIM39-204ENST00000396548 RNF10Q8N5U6 811 aaKnown RBP13.61□□□□□ -0.23
TRIM39-204ENST00000396548 ZFP42Q96MM3 310 aa13.61□□□□□ -0.23
TRIM39-204ENST00000396548 CYP3A43Q9HB55 503 aa13.61□□□□□ -0.23
TRIM39-204ENST00000396548 DNAI1Q9UI46 699 aa13.61□□□□□ -0.23
TRIM39-204ENST00000396548 PAXBP1Q9Y5B6 917 aa13.61□□□□□ -0.23
TRIM39-204ENST00000396548 NCANO14594 1321 aa13.6□□□□□ -0.23
TRIM39-204ENST00000396548 A0A0A6YYK5 440 aaPredicted RBP13.6□□□□□ -0.23
TRIM39-204ENST00000396548 KIF5CO60282 957 aa13.6□□□□□ -0.23
TRIM39-204ENST00000396548 ITGA4P13612 1032 aa13.6□□□□□ -0.23
TRIM39-204ENST00000396548 ZSCAN20P17040 1043 aaPredicted RBP13.6□□□□□ -0.23
TRIM39-204ENST00000396548 RAP1GAPP47736 663 aa13.6□□□□□ -0.23
TRIM39-204ENST00000396548 LPPQ93052 612 aa13.6□□□□□ -0.23
TRIM39-204ENST00000396548 CAPN6Q9Y6Q1 641 aa13.6□□□□□ -0.23
TRIM39-204ENST00000396548 TSC2P49815 1807 aa13.6□□□□□ -0.23
TRIM39-204ENST00000396548 ARL5CA6NH57 179 aa13.6□□□□□ -0.23
TRIM39-204ENST00000396548 C9IYK1 514 aa13.6□□□□□ -0.23
TRIM39-204ENST00000396548 CILPO75339 1184 aa13.6□□□□□ -0.23
TRIM39-204ENST00000396548 GALCP54803 685 aa13.6□□□□□ -0.23
TRIM39-204ENST00000396548 CLEC16AQ2KHT3 1053 aa13.6□□□□□ -0.23
TRIM39-204ENST00000396548 TCTN1Q2MV58 587 aa13.6□□□□□ -0.23
TRIM39-204ENST00000396548 ZNF569Q5MCW4 686 aa13.6□□□□□ -0.23
TRIM39-204ENST00000396548 ADAM2Q99965 735 aa13.6□□□□□ -0.23
TRIM39-204ENST00000396548 NME7Q9Y5B8 376 aa13.6□□□□□ -0.23
TRIM39-204ENST00000396548 SPTLC1O15269 473 aa13.59□□□□□ -0.23
TRIM39-204ENST00000396548 TMEM253P0C7T8 217 aa13.59□□□□□ -0.23
TRIM39-204ENST00000396548 GJA8P48165 433 aa13.59□□□□□ -0.23
TRIM39-204ENST00000396548 LBX1P52954 281 aa13.59□□□□□ -0.23
TRIM39-204ENST00000396548 RAD23BP54727 409 aa13.59□□□□□ -0.23
TRIM39-204ENST00000396548 CDH8P55286 799 aa13.59□□□□□ -0.23
TRIM39-204ENST00000396548 FAAP100Q0VG06 881 aa13.59□□□□□ -0.23
TRIM39-204ENST00000396548 TAF3Q5VWG9 929 aa13.59□□□□□ -0.23
TRIM39-204ENST00000396548 ECHDC2Q86YB7 292 aa13.59□□□□□ -0.23
TRIM39-204ENST00000396548 KIF18AQ8NI77 898 aa13.59□□□□□ -0.23
TRIM39-204ENST00000396548 TOX2Q96NM4 488 aa13.59□□□□□ -0.23
TRIM39-204ENST00000396548 L2HGDHQ9H9P8 463 aa13.59□□□□□ -0.23
TRIM39-204ENST00000396548 GDAP2Q9NXN4 497 aa13.59□□□□□ -0.23
TRIM39-204ENST00000396548 NXF1Q9UBU9 619 aaKnown RBP13.59□□□□□ -0.23
TRIM39-204ENST00000396548 RTN2O75298 545 aa13.59□□□□□ -0.23
TRIM39-204ENST00000396548 MLH1P40692 756 aa13.59□□□□□ -0.23
TRIM39-204ENST00000396548 PLEKHG4Q58EX7 1191 aa13.59□□□□□ -0.23
TRIM39-204ENST00000396548 SCARA5Q6ZMJ2 495 aa13.59□□□□□ -0.23
TRIM39-204ENST00000396548 TXLNBQ8N3L3 684 aa13.59□□□□□ -0.23
TRIM39-204ENST00000396548 DIS3LQ8TF46 1054 aaKnown RBP13.59□□□□□ -0.23
TRIM39-204ENST00000396548 SECISBP2LQ93073 1101 aaKnown RBP13.59□□□□□ -0.23
TRIM39-204ENST00000396548 TWNKQ96RR1 684 aa13.59□□□□□ -0.23
TRIM39-204ENST00000396548 GOLGA2P5Q9HBQ8 144 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms