RNA–Protein interactions for RNA: ENST00000396547.5

TRIM39-203, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRIM39, Length 3,187 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-203ENST00000396547 PPP1R18Q6NYC8 613 aa10.42□□□□□ -0.74
TRIM39-203ENST00000396547 RHBDF2Q6PJF5 856 aa10.42□□□□□ -0.74
TRIM39-203ENST00000396547 STXBP4Q6ZWJ1 553 aa10.42□□□□□ -0.74
TRIM39-203ENST00000396547 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.42□□□□□ -0.74
TRIM39-203ENST00000396547 PPFIBP2Q8ND30 876 aa10.42□□□□□ -0.74
TRIM39-203ENST00000396547 CD101Q93033 1021 aa10.42□□□□□ -0.74
TRIM39-203ENST00000396547 LENG9Q96B70 501 aa10.42□□□□□ -0.74
TRIM39-203ENST00000396547 KREMEN1Q96MU8 473 aa10.42□□□□□ -0.74
TRIM39-203ENST00000396547 TTC1Q99614 292 aa10.42□□□□□ -0.74
TRIM39-203ENST00000396547 MIPEPQ99797 713 aa10.42□□□□□ -0.74
TRIM39-203ENST00000396547 CADM1Q9BY67 442 aaKnown RBP10.42□□□□□ -0.74
TRIM39-203ENST00000396547 DCLRE1BQ9H816 532 aa10.42□□□□□ -0.74
TRIM39-203ENST00000396547 NUMBLQ9Y6R0 609 aa10.42□□□□□ -0.74
TRIM39-203ENST00000396547 WASF2Q9Y6W5 498 aa10.42□□□□□ -0.74
TRIM39-203ENST00000396547 FRMPD4Q14CM0 1322 aa10.41□□□□□ -0.74
TRIM39-203ENST00000396547 TMEM150BA6NC51 233 aa10.41□□□□□ -0.74
TRIM39-203ENST00000396547 SNHG28P0DPA3 235 aa10.41□□□□□ -0.74
TRIM39-203ENST00000396547 SKIP12755 728 aa10.41□□□□□ -0.74
TRIM39-203ENST00000396547 PTPN4P29074 926 aa10.41□□□□□ -0.74
TRIM39-203ENST00000396547 VHLP40337 213 aa10.41□□□□□ -0.74
TRIM39-203ENST00000396547 SKIV2L2P42285 1042 aaKnown RBP10.41□□□□□ -0.74
TRIM39-203ENST00000396547 YARSP54577 528 aaKnown RBP10.41□□□□□ -0.74
TRIM39-203ENST00000396547 ROR2Q01974 943 aaKnown RBP10.41□□□□□ -0.74
TRIM39-203ENST00000396547 LAMB3Q13751 1172 aa10.41□□□□□ -0.74
TRIM39-203ENST00000396547 THOC5Q13769 683 aaKnown RBP10.41□□□□□ -0.74
TRIM39-203ENST00000396547 STAT4Q14765 748 aa10.41□□□□□ -0.74
TRIM39-203ENST00000396547 MAPK6Q16659 721 aa10.41□□□□□ -0.74
TRIM39-203ENST00000396547 LRRC6Q86X45 466 aa10.41□□□□□ -0.74
TRIM39-203ENST00000396547 LMO3Q8TAP4 145 aa10.41□□□□□ -0.74
TRIM39-203ENST00000396547 NRG4Q8WWG1 115 aa10.41□□□□□ -0.74
TRIM39-203ENST00000396547 ZNF75CPQ92670 426 aaPredicted RBP10.41□□□□□ -0.74
TRIM39-203ENST00000396547 AMNQ9BXJ7 453 aa10.41□□□□□ -0.74
TRIM39-203ENST00000396547 WRAP73Q9P2S5 460 aaPredicted RBP10.41□□□□□ -0.74
TRIM39-203ENST00000396547 ZBTB12Q9Y330 459 aaPredicted RBP10.41□□□□□ -0.74
TRIM39-203ENST00000396547 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.41□□□□□ -0.74
TRIM39-203ENST00000396547 STARD13Q9Y3M8 1113 aa10.41□□□□□ -0.74
TRIM39-203ENST00000396547 NEU2Q9Y3R4 380 aa10.41□□□□□ -0.74
TRIM39-203ENST00000396547 FSCN2O14926 492 aa10.41□□□□□ -0.74
TRIM39-203ENST00000396547 EDF1O60869 148 aaKnown RBP10.41□□□□□ -0.74
TRIM39-203ENST00000396547 WFS1O76024 890 aa10.41□□□□□ -0.74
TRIM39-203ENST00000396547 ETS2P15036 469 aa10.41□□□□□ -0.74
TRIM39-203ENST00000396547 NFIAQ12857 509 aa10.41□□□□□ -0.74
TRIM39-203ENST00000396547 GPS1Q13098 491 aa10.41□□□□□ -0.74
TRIM39-203ENST00000396547 EFTUD2Q15029 972 aaKnown RBP eCLIP10.41□□□□□ -0.74
TRIM39-203ENST00000396547 PLEKHG4Q58EX7 1191 aa10.41□□□□□ -0.74
TRIM39-203ENST00000396547 ACSBG2Q5FVE4 666 aa10.41□□□□□ -0.74
TRIM39-203ENST00000396547 CCDC174Q6PII3 467 aa10.41□□□□□ -0.74
TRIM39-203ENST00000396547 TRABD2AQ86V40 505 aa10.41□□□□□ -0.74
TRIM39-203ENST00000396547 WDR60Q8WVS4 1066 aa10.41□□□□□ -0.74
TRIM39-203ENST00000396547 KIFAP3Q92845 792 aa10.41□□□□□ -0.74
TRIM39-203ENST00000396547 OLFML3Q9NRN5 406 aa10.41□□□□□ -0.74
TRIM39-203ENST00000396547 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.41□□□□□ -0.74
TRIM39-203ENST00000396547 HAUS5O94927 633 aa10.4□□□□□ -0.74
TRIM39-203ENST00000396547 PYGLP06737 847 aa10.4□□□□□ -0.74
TRIM39-203ENST00000396547 TROVE2P10155 538 aaKnown RBP eCLIP10.4□□□□□ -0.74
TRIM39-203ENST00000396547 CYP11B1P15538 503 aa10.4□□□□□ -0.74
TRIM39-203ENST00000396547 SHMT1P34896 483 aa10.4□□□□□ -0.74
TRIM39-203ENST00000396547 CCNG1P51959 295 aa10.4□□□□□ -0.74
TRIM39-203ENST00000396547 DOK7Q18PE1 504 aa10.4□□□□□ -0.74
TRIM39-203ENST00000396547 LMBRD2Q68DH5 695 aaPredicted RBP10.4□□□□□ -0.74
TRIM39-203ENST00000396547 C4orf50Q6ZRC1 276 aa10.4□□□□□ -0.74
TRIM39-203ENST00000396547 GRK7Q8WTQ7 553 aa10.4□□□□□ -0.74
TRIM39-203ENST00000396547 PSPC1Q8WXF1 523 aaKnown RBP10.4□□□□□ -0.74
TRIM39-203ENST00000396547 MAML1Q92585 1016 aa10.4□□□□□ -0.74
TRIM39-203ENST00000396547 SEMA4DQ92854 862 aa10.4□□□□□ -0.74
TRIM39-203ENST00000396547 ZNF333Q96JL9 665 aa10.4□□□□□ -0.74
TRIM39-203ENST00000396547 MOV10L1Q9BXT6 1211 aaKnown RBP10.4□□□□□ -0.74
TRIM39-203ENST00000396547 MAK16Q9BXY0 300 aaKnown RBP10.4□□□□□ -0.74
TRIM39-203ENST00000396547 GGA1Q9UJY5 639 aa10.4□□□□□ -0.74
TRIM39-203ENST00000396547 TBX10O75333 385 aa10.4□□□□□ -0.74
TRIM39-203ENST00000396547 ESRRAP11474 423 aaPredicted RBP10.4□□□□□ -0.74
TRIM39-203ENST00000396547 SERPINB3P29508 390 aa10.4□□□□□ -0.74
TRIM39-203ENST00000396547 PDIA2Q13087 525 aaKnown RBP10.4□□□□□ -0.74
TRIM39-203ENST00000396547 ACVR2BQ13705 512 aa10.4□□□□□ -0.74
TRIM39-203ENST00000396547 C9orf131Q5VYM1 1079 aa10.4□□□□□ -0.74
TRIM39-203ENST00000396547 TTC7BQ86TV6 843 aa10.4□□□□□ -0.74
TRIM39-203ENST00000396547 CBWD2Q8IUF1 395 aa10.4□□□□□ -0.74
TRIM39-203ENST00000396547 SLC25A41Q8N5S1 370 aa10.4□□□□□ -0.74
TRIM39-203ENST00000396547 ZNF784Q8NCA9 323 aaPredicted RBP10.4□□□□□ -0.74
TRIM39-203ENST00000396547 PLEKHO2Q8TD55 490 aa10.4□□□□□ -0.74
TRIM39-203ENST00000396547 C10orf82Q8WW14 230 aa10.4□□□□□ -0.74
TRIM39-203ENST00000396547 TTC17Q96AE7 1141 aa10.4□□□□□ -0.74
TRIM39-203ENST00000396547 FAM20AQ96MK3 541 aa10.4□□□□□ -0.74
TRIM39-203ENST00000396547 CFAP57Q96MR6 1250 aa10.4□□□□□ -0.74
TRIM39-203ENST00000396547 FAM161BQ96MY7 647 aa10.4□□□□□ -0.74
TRIM39-203ENST00000396547 VAV3Q9UKW4 847 aa10.4□□□□□ -0.74
TRIM39-203ENST00000396547 ADGRA3Q8IWK6 1321 aa10.4□□□□□ -0.74
TRIM39-203ENST00000396547 THSD7BQ9C0I4 1608 aa10.4□□□□□ -0.74
TRIM39-203ENST00000396547 hCG_2014768A0A024R1R8 64 aa10.4□□□□□ -0.75
TRIM39-203ENST00000396547 G3V3G9 751 aa10.4□□□□□ -0.75
TRIM39-203ENST00000396547 SMAPO00193 183 aa10.4□□□□□ -0.75
TRIM39-203ENST00000396547 CNGA1P29973 690 aa10.4□□□□□ -0.75
TRIM39-203ENST00000396547 ARSEP51690 589 aa10.4□□□□□ -0.75
TRIM39-203ENST00000396547 DYNLT1P63172 113 aa10.4□□□□□ -0.75
TRIM39-203ENST00000396547 USP4Q13107 963 aa10.4□□□□□ -0.75
TRIM39-203ENST00000396547 MTMR2Q13614 643 aa10.4□□□□□ -0.75
TRIM39-203ENST00000396547 MOGSQ13724 837 aa10.4□□□□□ -0.75
TRIM39-203ENST00000396547 PTK6Q13882 451 aa10.4□□□□□ -0.75
TRIM39-203ENST00000396547 WASHC2DQ5SRD0 308 aa10.4□□□□□ -0.75
TRIM39-203ENST00000396547 DCAF8Q5TAQ9 597 aa10.4□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms