RNA–Protein interactions for RNA: ENST00000396355.5

NDE1-202, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,936 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-202ENST00000396355 NR4A1P22736 598 aa8.88□□□□□ -0.99
NDE1-202ENST00000396355 SLC1A4P43007 532 aa8.88□□□□□ -0.99
NDE1-202ENST00000396355 C21orf59P57076 290 aa8.88□□□□□ -0.99
NDE1-202ENST00000396355 RPS6P62753 249 aaKnown RBP8.88□□□□□ -0.99
NDE1-202ENST00000396355 LPCAT2Q7L5N7 544 aa8.88□□□□□ -0.99
NDE1-202ENST00000396355 IQCKQ8N0W5 287 aa8.88□□□□□ -0.99
NDE1-202ENST00000396355 GSDMAQ96QA5 445 aa8.88□□□□□ -0.99
NDE1-202ENST00000396355 MYLK2Q9H1R3 596 aa8.88□□□□□ -0.99
NDE1-202ENST00000396355 SNX25Q9H3E2 840 aa8.88□□□□□ -0.99
NDE1-202ENST00000396355 RXFP1Q9HBX9 757 aa8.88□□□□□ -0.99
NDE1-202ENST00000396355 UCKL1Q9NWZ5 548 aa8.88□□□□□ -0.99
NDE1-202ENST00000396355 ARMCX3Q9UH62 379 aaPredicted RBP8.88□□□□□ -0.99
NDE1-202ENST00000396355 DAPK2Q9UIK4 370 aa8.88□□□□□ -0.99
NDE1-202ENST00000396355 PP2D1A8MPX8 630 aa8.88□□□□□ -0.99
NDE1-202ENST00000396355 B3GALNT1O75752 331 aa8.88□□□□□ -0.99
NDE1-202ENST00000396355 ESRRBO95718 433 aa8.88□□□□□ -0.99
NDE1-202ENST00000396355 USP17L8P0C7I0 530 aa8.88□□□□□ -0.99
NDE1-202ENST00000396355 FLT3P36888 993 aa8.88□□□□□ -0.99
NDE1-202ENST00000396355 ADCY8P40145 1251 aa8.88□□□□□ -0.99
NDE1-202ENST00000396355 IRX4P78413 519 aa8.88□□□□□ -0.99
NDE1-202ENST00000396355 GRIK5Q16478 980 aa8.88□□□□□ -0.99
NDE1-202ENST00000396355 NAALADL2Q58DX5 795 aa8.88□□□□□ -0.99
NDE1-202ENST00000396355 PAPD7Q5XG87 772 aaKnown RBP8.88□□□□□ -0.99
NDE1-202ENST00000396355 TRAF7Q6Q0C0 670 aa8.88□□□□□ -0.99
NDE1-202ENST00000396355 EPM2AIP1Q7L775 607 aaPredicted RBP8.88□□□□□ -0.99
NDE1-202ENST00000396355 DYMQ7RTS9 669 aa8.88□□□□□ -0.99
NDE1-202ENST00000396355 CROCCP2Q86T23 111 aa8.88□□□□□ -0.99
NDE1-202ENST00000396355 MTDHQ86UE4 582 aaKnown RBP8.88□□□□□ -0.99
NDE1-202ENST00000396355 BRSK2Q8IWQ3 736 aa8.88□□□□□ -0.99
NDE1-202ENST00000396355 KBTBD2Q8IY47 623 aa8.88□□□□□ -0.99
NDE1-202ENST00000396355 SLC10A4Q96EP9 437 aa8.88□□□□□ -0.99
NDE1-202ENST00000396355 LIN28AQ9H9Z2 209 aaKnown RBP8.88□□□□□ -0.99
NDE1-202ENST00000396355 C12orf4Q9NQ89 552 aa8.88□□□□□ -0.99
NDE1-202ENST00000396355 TLK1Q9UKI8 766 aa8.88□□□□□ -0.99
NDE1-202ENST00000396355 AMFRQ9UKV5 643 aa8.88□□□□□ -0.99
NDE1-202ENST00000396355 A0A0J9YVX5 310 aa8.87□□□□□ -0.99
NDE1-202ENST00000396355 TEX28O15482 410 aa8.87□□□□□ -0.99
NDE1-202ENST00000396355 MGEA5O60502 916 aa8.87□□□□□ -0.99
NDE1-202ENST00000396355 CCDC22O60826 627 aa8.87□□□□□ -0.99
NDE1-202ENST00000396355 DAB1O75553 588 aa8.87□□□□□ -0.99
NDE1-202ENST00000396355 TPBGLP0DKB5 382 aa8.87□□□□□ -0.99
NDE1-202ENST00000396355 RARAP10276 462 aa8.87□□□□□ -0.99
NDE1-202ENST00000396355 HERVK_113P62684 666 aa8.87□□□□□ -0.99
NDE1-202ENST00000396355 ITIH3Q06033 890 aa8.87□□□□□ -0.99
NDE1-202ENST00000396355 OASLQ15646 514 aaKnown RBP8.87□□□□□ -0.99
NDE1-202ENST00000396355 PFKFB3Q16875 520 aaPredicted RBP8.87□□□□□ -0.99
NDE1-202ENST00000396355 SMU1Q2TAY7 513 aa8.87□□□□□ -0.99
NDE1-202ENST00000396355 KHDC1Q4VXA5 237 aaKnown RBP8.87□□□□□ -0.99
NDE1-202ENST00000396355 SMUG1Q53HV7 270 aa8.87□□□□□ -0.99
NDE1-202ENST00000396355 DCAF17Q5H9S7 520 aaPredicted RBP8.87□□□□□ -0.99
NDE1-202ENST00000396355 METTL21CQ5VZV1 264 aa8.87□□□□□ -0.99
NDE1-202ENST00000396355 CCDC84Q86UT8 332 aaPredicted RBP8.87□□□□□ -0.99
NDE1-202ENST00000396355 C4orf33Q8N1A6 199 aa8.87□□□□□ -0.99
NDE1-202ENST00000396355 ZC3H15Q8WU90 426 aaKnown RBP8.87□□□□□ -0.99
NDE1-202ENST00000396355 GLG1Q92896 1179 aa8.87□□□□□ -0.99
NDE1-202ENST00000396355 C6orf203Q9P0P8 240 aaPredicted RBP8.87□□□□□ -0.99
NDE1-202ENST00000396355 TMED5Q9Y3A6 229 aa8.87□□□□□ -0.99
NDE1-202ENST00000396355 LY75O60449 1722 aa8.87□□□□□ -0.99
NDE1-202ENST00000396355 M0R2N6 131 aa8.87□□□□□ -0.99
NDE1-202ENST00000396355 SH3BP5O60239 455 aa8.87□□□□□ -0.99
NDE1-202ENST00000396355 FOXD2O60548 495 aaPredicted RBP8.87□□□□□ -0.99
NDE1-202ENST00000396355 KRT4P19013 534 aa8.87□□□□□ -0.99
NDE1-202ENST00000396355 CHKAP35790 457 aa8.87□□□□□ -0.99
NDE1-202ENST00000396355 RXRGP48443 463 aa8.87□□□□□ -0.99
NDE1-202ENST00000396355 HDAC4P56524 1084 aa8.87□□□□□ -0.99
NDE1-202ENST00000396355 HPCAP84074 193 aa8.87□□□□□ -0.99
NDE1-202ENST00000396355 KRT76Q01546 638 aa8.87□□□□□ -0.99
NDE1-202ENST00000396355 ASIC2Q16515 512 aa8.87□□□□□ -0.99
NDE1-202ENST00000396355 LACTB2Q53H82 288 aaPredicted RBP8.87□□□□□ -0.99
NDE1-202ENST00000396355 AGBL2Q5U5Z8 902 aa8.87□□□□□ -0.99
NDE1-202ENST00000396355 ELMSAN1Q6PJG2 1045 aa8.87□□□□□ -0.99
NDE1-202ENST00000396355 HEATR3Q7Z4Q2 680 aa8.87□□□□□ -0.99
NDE1-202ENST00000396355 TREML1Q86YW5 311 aa8.87□□□□□ -0.99
NDE1-202ENST00000396355 CREG2Q8IUH2 290 aa8.87□□□□□ -0.99
NDE1-202ENST00000396355 ANKRD35Q8N283 1001 aa8.87□□□□□ -0.99
NDE1-202ENST00000396355 DCLK2Q8N568 766 aa8.87□□□□□ -0.99
NDE1-202ENST00000396355 FITM2Q8N6M3 262 aa8.87□□□□□ -0.99
NDE1-202ENST00000396355 PTPRN2Q92932 1015 aa8.87□□□□□ -0.99
NDE1-202ENST00000396355 CNOT6LQ96LI5 555 aaKnown RBP8.87□□□□□ -0.99
NDE1-202ENST00000396355 FERD3LQ96RJ6 166 aa8.87□□□□□ -0.99
NDE1-202ENST00000396355 DUSP9Q99956 384 aaKnown RBP8.87□□□□□ -0.99
NDE1-202ENST00000396355 RNF38Q9H0F5 515 aa8.87□□□□□ -0.99
NDE1-202ENST00000396355 CCDC68Q9H2F9 335 aa8.87□□□□□ -0.99
NDE1-202ENST00000396355 KANSL2Q9H9L4 492 aa8.87□□□□□ -0.99
NDE1-202ENST00000396355 NAV1Q8NEY1 1877 aa8.87□□□□□ -0.99
NDE1-202ENST00000396355 ZSCAN5BA6NJL1 495 aa8.87□□□□□ -0.99
NDE1-202ENST00000396355 FOXO6A8MYZ6 492 aa8.87□□□□□ -0.99
NDE1-202ENST00000396355 ZBED4O75132 1171 aa8.87□□□□□ -0.99
NDE1-202ENST00000396355 IFNA8P32881 189 aa8.87□□□□□ -0.99
NDE1-202ENST00000396355 CASP5P51878 434 aa8.87□□□□□ -0.99
NDE1-202ENST00000396355 IST1P53990 364 aa8.87□□□□□ -0.99
NDE1-202ENST00000396355 CST9Q5W186 159 aa8.87□□□□□ -0.99
NDE1-202ENST00000396355 SESTD1Q86VW0 696 aa8.87□□□□□ -0.99
NDE1-202ENST00000396355 IRF2BP1Q8IU81 584 aa8.87□□□□□ -0.99
NDE1-202ENST00000396355 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP8.87□□□□□ -0.99
NDE1-202ENST00000396355 BHMTQ93088 406 aa8.87□□□□□ -0.99
NDE1-202ENST00000396355 DYNLL2Q96FJ2 89 aa8.87□□□□□ -0.99
NDE1-202ENST00000396355 RPAP3Q9H6T3 665 aaPredicted RBP8.87□□□□□ -0.99
NDE1-202ENST00000396355 TRPV5Q9NQA5 729 aa8.87□□□□□ -0.99
NDE1-202ENST00000396355 MARCOQ9UEW3 520 aaPredicted RBP8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms