RNA–Protein interactions for RNA: ENST00000395969.6

VPS41-203, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5 BASIC

Gene VPS41, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-203ENST00000395969 ASIC2Q16515 512 aa5.72□□□□□ -1.49
VPS41-203ENST00000395969 THEMIS2Q5TEJ8 643 aa5.72□□□□□ -1.49
VPS41-203ENST00000395969 C8orf74Q6P047 294 aa5.72□□□□□ -1.49
VPS41-203ENST00000395969 ALKAL1Q6UXT8 129 aa5.72□□□□□ -1.49
VPS41-203ENST00000395969 PHF13Q86YI8 300 aaPredicted RBP5.72□□□□□ -1.49
VPS41-203ENST00000395969 RHOT2Q8IXI1 618 aa5.72□□□□□ -1.49
VPS41-203ENST00000395969 CACNA2D3Q8IZS8 1091 aa5.72□□□□□ -1.49
VPS41-203ENST00000395969 BRI3BPQ8WY22 251 aa5.72□□□□□ -1.49
VPS41-203ENST00000395969 GJA10Q969M2 543 aa5.72□□□□□ -1.49
VPS41-203ENST00000395969 RUNDC3BQ96NL0 473 aa5.72□□□□□ -1.49
VPS41-203ENST00000395969 ACO2Q99798 780 aaKnown RBP5.72□□□□□ -1.49
VPS41-203ENST00000395969 TMEM117Q9H0C3 514 aa5.72□□□□□ -1.49
VPS41-203ENST00000395969 PPANQ9NQ55 473 aaKnown RBP5.72□□□□□ -1.49
VPS41-203ENST00000395969 SLC5A4Q9NY91 659 aa5.72□□□□□ -1.49
VPS41-203ENST00000395969 HYOU1Q9Y4L1 999 aa5.72□□□□□ -1.49
VPS41-203ENST00000395969 CAPN6Q9Y6Q1 641 aa5.72□□□□□ -1.49
VPS41-203ENST00000395969 MYH10P35580 1976 aa5.72□□□□□ -1.49
VPS41-203ENST00000395969 NLRC5Q86WI3 1866 aa5.72□□□□□ -1.49
VPS41-203ENST00000395969 TOM1L1O75674 476 aa5.72□□□□□ -1.49
VPS41-203ENST00000395969 SNAI1O95863 264 aaPredicted RBP5.72□□□□□ -1.49
VPS41-203ENST00000395969 F2P00734 622 aa5.72□□□□□ -1.49
VPS41-203ENST00000395969 GNRH1P01148 92 aa5.72□□□□□ -1.49
VPS41-203ENST00000395969 GH1P01241 217 aa5.72□□□□□ -1.49
VPS41-203ENST00000395969 LINGO3P0C6S8 592 aa5.72□□□□□ -1.49
VPS41-203ENST00000395969 UNGP13051 313 aaPredicted RBP5.72□□□□□ -1.49
VPS41-203ENST00000395969 HSPA6P17066 643 aa5.72□□□□□ -1.49
VPS41-203ENST00000395969 EIF4A3P38919 411 aaKnown RBP5.72□□□□□ -1.49
VPS41-203ENST00000395969 MYL7Q01449 175 aa5.72□□□□□ -1.49
VPS41-203ENST00000395969 CETN1Q12798 172 aa5.72□□□□□ -1.49
VPS41-203ENST00000395969 MYO1EQ12965 1108 aa5.72□□□□□ -1.49
VPS41-203ENST00000395969 SNRNP35Q16560 246 aaKnown RBP5.72□□□□□ -1.49
VPS41-203ENST00000395969 TAZQ16635 292 aa5.72□□□□□ -1.49
VPS41-203ENST00000395969 CBWD6Q4V339 395 aa5.72□□□□□ -1.49
VPS41-203ENST00000395969 CBWD3Q5JTY5 395 aa5.72□□□□□ -1.49
VPS41-203ENST00000395969 CBWD5Q5RIA9 395 aa5.72□□□□□ -1.49
VPS41-203ENST00000395969 PHLDB3Q6NSJ2 640 aa5.72□□□□□ -1.49
VPS41-203ENST00000395969 CHRDL2Q6WN34 429 aa5.72□□□□□ -1.49
VPS41-203ENST00000395969 ZNF571Q7Z3V5 609 aaPredicted RBP5.72□□□□□ -1.49
VPS41-203ENST00000395969 RASAL3Q86YV0 1011 aa5.72□□□□□ -1.49
VPS41-203ENST00000395969 DRAXINQ8NBI3 349 aaPredicted RBP5.72□□□□□ -1.49
VPS41-203ENST00000395969 PIGOQ8TEQ8 1089 aa5.72□□□□□ -1.49
VPS41-203ENST00000395969 IFT74Q96LB3 600 aa5.72□□□□□ -1.49
VPS41-203ENST00000395969 CCDC42Q96M95 316 aa5.72□□□□□ -1.49
VPS41-203ENST00000395969 LSM14BQ9BX40 385 aaKnown RBP5.72□□□□□ -1.49
VPS41-203ENST00000395969 LHX5Q9H2C1 402 aa5.72□□□□□ -1.49
VPS41-203ENST00000395969 RBM12Q9NTZ6 932 aaKnown RBP5.72□□□□□ -1.49
VPS41-203ENST00000395969 UVRAGQ9P2Y5 699 aa5.72□□□□□ -1.49
VPS41-203ENST00000395969 NFU1Q9UMS0 254 aa5.72□□□□□ -1.49
VPS41-203ENST00000395969 TLL2Q9Y6L7 1015 aa5.72□□□□□ -1.49
VPS41-203ENST00000395969 SMIM35A0A1B0GVV1 85 aa5.71□□□□□ -1.49
VPS41-203ENST00000395969 K7ENM7 598 aa5.71□□□□□ -1.49
VPS41-203ENST00000395969 PES1O00541 588 aaKnown RBP5.71□□□□□ -1.49
VPS41-203ENST00000395969 DDX3XO00571 662 aaKnown RBP eCLIP5.71□□□□□ -1.49
VPS41-203ENST00000395969 TACC1O75410 805 aa5.71□□□□□ -1.49
VPS41-203ENST00000395969 IPO7O95373 1038 aaKnown RBP5.71□□□□□ -1.49
VPS41-203ENST00000395969 DRD4P21917 467 aa5.71□□□□□ -1.49
VPS41-203ENST00000395969 RANBP1P43487 201 aa5.71□□□□□ -1.49
VPS41-203ENST00000395969 CASP4P49662 377 aa5.71□□□□□ -1.49
VPS41-203ENST00000395969 KLK7P49862 253 aa5.71□□□□□ -1.49
VPS41-203ENST00000395969 IGBP1P78318 339 aa5.71□□□□□ -1.49
VPS41-203ENST00000395969 CENPCQ03188 943 aa5.71□□□□□ -1.49
VPS41-203ENST00000395969 MBTD1Q05BQ5 628 aa5.71□□□□□ -1.49
VPS41-203ENST00000395969 PPP3CAQ08209 521 aa5.71□□□□□ -1.49
VPS41-203ENST00000395969 KIF5AQ12840 1032 aa5.71□□□□□ -1.49
VPS41-203ENST00000395969 MAP2K5Q13163 448 aa5.71□□□□□ -1.49
VPS41-203ENST00000395969 BIRC3Q13489 604 aa5.71□□□□□ -1.49
VPS41-203ENST00000395969 PRPF4BQ13523 1007 aaKnown RBP5.71□□□□□ -1.49
VPS41-203ENST00000395969 TFDP1Q14186 410 aa5.71□□□□□ -1.49
VPS41-203ENST00000395969 LRRC41Q15345 812 aa5.71□□□□□ -1.49
VPS41-203ENST00000395969 ZBTB6Q15916 424 aa5.71□□□□□ -1.49
VPS41-203ENST00000395969 FAM26DQ5JW98 314 aa5.71□□□□□ -1.49
VPS41-203ENST00000395969 NFRKBQ6P4R8 1299 aa5.71□□□□□ -1.49
VPS41-203ENST00000395969 ARL10Q8N8L6 244 aa5.71□□□□□ -1.49
VPS41-203ENST00000395969 TLR10Q9BXR5 811 aa5.71□□□□□ -1.49
VPS41-203ENST00000395969 ABHD16BQ9H3Z7 469 aa5.71□□□□□ -1.49
VPS41-203ENST00000395969 ASB7Q9H672 318 aa5.71□□□□□ -1.49
VPS41-203ENST00000395969 KMT5AQ9NQR1 393 aa5.71□□□□□ -1.49
VPS41-203ENST00000395969 SAGE1Q9NXZ1 904 aa5.71□□□□□ -1.49
VPS41-203ENST00000395969 ERAP1Q9NZ08 941 aa5.71□□□□□ -1.49
VPS41-203ENST00000395969 GJD2Q9UKL4 321 aa5.71□□□□□ -1.49
VPS41-203ENST00000395969 PLAAQ9Y263 795 aa5.71□□□□□ -1.49
VPS41-203ENST00000395969 EFR3BQ9Y2G0 817 aa5.71□□□□□ -1.49
VPS41-203ENST00000395969 C2CD2Q9Y426 696 aa5.71□□□□□ -1.49
VPS41-203ENST00000395969 PTPRJQ12913 1337 aa5.71□□□□□ -1.5
VPS41-203ENST00000395969 MACROD2A1Z1Q3 448 aa5.71□□□□□ -1.5
VPS41-203ENST00000395969 CFAP73A6NFT4 308 aa5.71□□□□□ -1.5
VPS41-203ENST00000395969 CCT8L1PA6NM43 557 aa5.71□□□□□ -1.5
VPS41-203ENST00000395969 MIF4GDA9UHW6 222 aaKnown RBP5.71□□□□□ -1.5
VPS41-203ENST00000395969 BTBD19C9JJ37 291 aa5.71□□□□□ -1.5
VPS41-203ENST00000395969 RTN3O95197 1032 aaPredicted RBP5.71□□□□□ -1.5
VPS41-203ENST00000395969 KRT18P05783 430 aaKnown RBP5.71□□□□□ -1.5
VPS41-203ENST00000395969 KRT13P13646 458 aa5.71□□□□□ -1.5
VPS41-203ENST00000395969 CHRNB2P17787 502 aa5.71□□□□□ -1.5
VPS41-203ENST00000395969 CYP3A5P20815 502 aa5.71□□□□□ -1.5
VPS41-203ENST00000395969 GABRB2P47870 512 aa5.71□□□□□ -1.5
VPS41-203ENST00000395969 STAT5BP51692 787 aa5.71□□□□□ -1.5
VPS41-203ENST00000395969 MFAP3P55082 362 aa5.71□□□□□ -1.5
VPS41-203ENST00000395969 TNFAIP2Q03169 654 aa5.71□□□□□ -1.5
VPS41-203ENST00000395969 PTK2Q05397 1052 aa5.71□□□□□ -1.5
VPS41-203ENST00000395969 INCA1Q0VD86 236 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms