RNA–Protein interactions for RNA: ENST00000395454.6

SCAF11-204, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF11, Length 1,931 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-204ENST00000395454 GLYCTKQ8IVS8 523 aa16.21■□□□□ 0.19
SCAF11-204ENST00000395454 BRSK2Q8IWQ3 736 aa16.21■□□□□ 0.19
SCAF11-204ENST00000395454 RPUSD2Q8IZ73 545 aaKnown RBP16.21■□□□□ 0.19
SCAF11-204ENST00000395454 AGPAT1Q99943 283 aa16.21■□□□□ 0.19
SCAF11-204ENST00000395454 ADAM2Q99965 735 aa16.21■□□□□ 0.19
SCAF11-204ENST00000395454 LBHD1Q9BQE6 289 aaPredicted RBP16.21■□□□□ 0.19
SCAF11-204ENST00000395454 FTHL17Q9BXU8 183 aa16.21■□□□□ 0.19
SCAF11-204ENST00000395454 PTPRHQ9HD43 1115 aa16.21■□□□□ 0.19
SCAF11-204ENST00000395454 CHST12Q9NRB3 414 aa16.21■□□□□ 0.19
SCAF11-204ENST00000395454 RBAKQ9NYW8 714 aaPredicted RBP16.21■□□□□ 0.19
SCAF11-204ENST00000395454 PUF60Q9UHX1 559 aaKnown RBP16.21■□□□□ 0.19
SCAF11-204ENST00000395454 LTBP2Q14767 1821 aa16.2■□□□□ 0.18
SCAF11-204ENST00000395454 DLATP10515 647 aaKnown RBP16.2■□□□□ 0.18
SCAF11-204ENST00000395454 FPGSQ05932 587 aa16.2■□□□□ 0.18
SCAF11-204ENST00000395454 TEX35Q5T0J7 233 aa16.2■□□□□ 0.18
SCAF11-204ENST00000395454 MEI1Q5TIA1 1274 aa16.2■□□□□ 0.18
SCAF11-204ENST00000395454 EPS8L1Q8TE68 723 aa16.2■□□□□ 0.18
SCAF11-204ENST00000395454 KAT5Q92993 513 aa16.2■□□□□ 0.18
SCAF11-204ENST00000395454 OSBPL9Q96SU4 736 aa16.2■□□□□ 0.18
SCAF11-204ENST00000395454 CGRRF1Q99675 332 aa16.2■□□□□ 0.18
SCAF11-204ENST00000395454 EIF2AQ9BY44 585 aaKnown RBP16.2■□□□□ 0.18
SCAF11-204ENST00000395454 PTPRJQ12913 1337 aa16.19■□□□□ 0.18
SCAF11-204ENST00000395454 BUB1O43683 1085 aa16.19■□□□□ 0.18
SCAF11-204ENST00000395454 PALMO75781 387 aa16.19■□□□□ 0.18
SCAF11-204ENST00000395454 NPTXRO95502 500 aa16.19■□□□□ 0.18
SCAF11-204ENST00000395454 PFKMP08237 780 aa16.19■□□□□ 0.18
SCAF11-204ENST00000395454 AP3M2P53677 418 aa16.19■□□□□ 0.18
SCAF11-204ENST00000395454 HADHBP55084 474 aaKnown RBP16.19■□□□□ 0.18
SCAF11-204ENST00000395454 PPIGQ13427 754 aaKnown RBP eCLIP16.19■□□□□ 0.185e-9■■■□□ 18.1
SCAF11-204ENST00000395454 CNKSR3Q6P9H4 555 aa16.19■□□□□ 0.18
SCAF11-204ENST00000395454 VWCEQ96DN2 955 aa16.19■□□□□ 0.18
SCAF11-204ENST00000395454 MMS19Q96T76 1030 aa16.19■□□□□ 0.18
SCAF11-204ENST00000395454 ISCUQ9H1K1 167 aa16.19■□□□□ 0.18
SCAF11-204ENST00000395454 CDT1Q9H211 546 aa16.19■□□□□ 0.18
SCAF11-204ENST00000395454 RAB21Q9UL25 225 aa16.19■□□□□ 0.18
SCAF11-204ENST00000395454 CES2O00748 559 aa16.19■□□□□ 0.18
SCAF11-204ENST00000395454 SRGAP2O75044 1071 aa16.19■□□□□ 0.18
SCAF11-204ENST00000395454 TUBBP07437 444 aa16.19■□□□□ 0.18
SCAF11-204ENST00000395454 ACOT2P49753 483 aa16.19■□□□□ 0.18
SCAF11-204ENST00000395454 GALCP54803 685 aa16.19■□□□□ 0.18
SCAF11-204ENST00000395454 OSTNP61366 133 aa16.19■□□□□ 0.18
SCAF11-204ENST00000395454 TCTN1Q2MV58 587 aa16.19■□□□□ 0.18
SCAF11-204ENST00000395454 ZBTB41Q5SVQ8 909 aa16.19■□□□□ 0.18
SCAF11-204ENST00000395454 TDRD10Q5VZ19 366 aaKnown RBP16.19■□□□□ 0.18
SCAF11-204ENST00000395454 APBB1IPQ7Z5R6 666 aaPredicted RBP16.19■□□□□ 0.18
SCAF11-204ENST00000395454 THNSL1Q8IYQ7 743 aa16.19■□□□□ 0.18
SCAF11-204ENST00000395454 PPM1KQ8N3J5 372 aa16.19■□□□□ 0.18
SCAF11-204ENST00000395454 CALR3Q96L12 384 aaKnown RBP16.19■□□□□ 0.18
SCAF11-204ENST00000395454 FNBP1Q96RU3 617 aa16.19■□□□□ 0.18
SCAF11-204ENST00000395454 ANKZF1Q9H8Y5 726 aa16.19■□□□□ 0.18
SCAF11-204ENST00000395454 PDE11AQ9HCR9 933 aa16.19■□□□□ 0.18
SCAF11-204ENST00000395454 IL23AQ9NPF7 189 aa16.19■□□□□ 0.18
SCAF11-204ENST00000395454 FAM105AQ9NUU6 356 aa16.19■□□□□ 0.18
SCAF11-204ENST00000395454 RNF14Q9UBS8 474 aa16.19■□□□□ 0.18
SCAF11-204ENST00000395454 PDE2AO00408 941 aaPredicted RBP16.18■□□□□ 0.18
SCAF11-204ENST00000395454 VNN1O95497 513 aa16.18■□□□□ 0.18
SCAF11-204ENST00000395454 GZMAP12544 262 aa16.18■□□□□ 0.18
SCAF11-204ENST00000395454 CHRNB2P17787 502 aa16.18■□□□□ 0.18
SCAF11-204ENST00000395454 CLCN6P51797 869 aa16.18■□□□□ 0.18
SCAF11-204ENST00000395454 IKBKEQ14164 716 aa16.18■□□□□ 0.18
SCAF11-204ENST00000395454 DSC3Q14574 896 aa16.18■□□□□ 0.18
SCAF11-204ENST00000395454 DCAF4L1Q3SXM0 396 aa16.18■□□□□ 0.18
SCAF11-204ENST00000395454 SEZ6Q53EL9 994 aa16.18■□□□□ 0.18
SCAF11-204ENST00000395454 PALB2Q86YC2 1186 aa16.18■□□□□ 0.18
SCAF11-204ENST00000395454 CEP120Q8N960 986 aa16.18■□□□□ 0.18
SCAF11-204ENST00000395454 TPCN2Q8NHX9 752 aa16.18■□□□□ 0.18
SCAF11-204ENST00000395454 LINC01599Q8WXQ3 324 aa16.18■□□□□ 0.18
SCAF11-204ENST00000395454 RFFLQ8WZ73 363 aa16.18■□□□□ 0.18
SCAF11-204ENST00000395454 TSPYL2Q9H2G4 693 aaPredicted RBP16.18■□□□□ 0.18
SCAF11-204ENST00000395454 ARGLU1Q9NWB6 273 aaPredicted RBP16.18■□□□□ 0.18
SCAF11-204ENST00000395454 HES2Q9Y543 173 aa16.18■□□□□ 0.18
SCAF11-204ENST00000395454 ANKRD62A6NC57 917 aa16.17■□□□□ 0.18
SCAF11-204ENST00000395454 TULP1O00294 542 aaPredicted RBP16.17■□□□□ 0.18
SCAF11-204ENST00000395454 OGTO15294 1046 aa16.17■□□□□ 0.18
SCAF11-204ENST00000395454 MCF2P10911 925 aa16.17■□□□□ 0.18
SCAF11-204ENST00000395454 TNFAIP3P21580 790 aa16.17■□□□□ 0.18
SCAF11-204ENST00000395454 POU5F1Q01860 360 aaKnown RBP16.17■□□□□ 0.18
SCAF11-204ENST00000395454 UBXN11Q5T124 520 aa16.17■□□□□ 0.18
SCAF11-204ENST00000395454 OTOP2Q7RTS6 562 aa16.17■□□□□ 0.18
SCAF11-204ENST00000395454 RTN4RL1Q86UN2 441 aaPredicted RBP16.17■□□□□ 0.18
SCAF11-204ENST00000395454 WDR49Q8IV35 697 aa16.17■□□□□ 0.18
SCAF11-204ENST00000395454 NOA1Q8NC60 698 aaKnown RBP16.17■□□□□ 0.18
SCAF11-204ENST00000395454 COG1Q8WTW3 980 aa16.17■□□□□ 0.18
SCAF11-204ENST00000395454 SLC20A1Q8WUM9 679 aa16.17■□□□□ 0.18
SCAF11-204ENST00000395454 APOL6Q9BWW8 343 aa16.17■□□□□ 0.18
SCAF11-204ENST00000395454 NXF3Q9H4D5 531 aaKnown RBP16.17■□□□□ 0.18
SCAF11-204ENST00000395454 RGS18Q9NS28 235 aa16.17■□□□□ 0.18
SCAF11-204ENST00000395454 CPSF3Q9UKF6 684 aaKnown RBP16.17■□□□□ 0.18
SCAF11-204ENST00000395454 PCDHB2Q9Y5E7 798 aa16.17■□□□□ 0.18
SCAF11-204ENST00000395454 PDE4DIPQ5VU43 2346 aa16.17■□□□□ 0.18
SCAF11-204ENST00000395454 MICAL3Q7RTP6 2002 aa16.17■□□□□ 0.18
SCAF11-204ENST00000395454 A0A0U1RQF3 1178 aa16.17■□□□□ 0.18
SCAF11-204ENST00000395454 CCDC151A5D8V7 595 aa16.17■□□□□ 0.18
SCAF11-204ENST00000395454 ZNF185O15231 689 aa16.17■□□□□ 0.18
SCAF11-204ENST00000395454 HLA-DRAP01903 254 aa16.17■□□□□ 0.18
SCAF11-204ENST00000395454 SLC24A5Q71RS6 500 aa16.17■□□□□ 0.18
SCAF11-204ENST00000395454 NOP9Q86U38 636 aaKnown RBP16.17■□□□□ 0.18
SCAF11-204ENST00000395454 RNF169Q8NCN4 708 aa16.17■□□□□ 0.18
SCAF11-204ENST00000395454 DDX1Q92499 740 aaKnown RBP16.17■□□□□ 0.18
SCAF11-204ENST00000395454 PARD6BQ9BYG5 372 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms