RNA–Protein interactions for RNA: ENST00000394947.7

SIN3A-202, Transcript of SIN3 transcription regulator family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIN3A, Length 6,737 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-202ENST00000394947 RHOT1Q8IXI2 618 aa12.81□□□□□ -0.36
SIN3A-202ENST00000394947 OMA1Q96E52 524 aa12.81□□□□□ -0.36
SIN3A-202ENST00000394947 PRAG1Q86YV5 1406 aa12.81□□□□□ -0.36
SIN3A-202ENST00000394947 ZBTB7AO95365 584 aa12.81□□□□□ -0.36
SIN3A-202ENST00000394947 KNOP1Q1ED39 458 aaKnown RBP12.81□□□□□ -0.36
SIN3A-202ENST00000394947 EPC2Q52LR7 807 aa12.81□□□□□ -0.36
SIN3A-202ENST00000394947 CALML6Q8TD86 181 aa12.81□□□□□ -0.36
SIN3A-202ENST00000394947 ASAP3Q8TDY4 903 aa12.81□□□□□ -0.36
SIN3A-202ENST00000394947 ZNF473Q8WTR7 871 aaKnown RBP12.81□□□□□ -0.36
SIN3A-202ENST00000394947 NMRK2Q9NPI5 230 aa12.81□□□□□ -0.36
SIN3A-202ENST00000394947 AGAP1Q9UPQ3 857 aa12.81□□□□□ -0.36
SIN3A-202ENST00000394947 SLC30A1Q9Y6M5 507 aa12.81□□□□□ -0.36
SIN3A-202ENST00000394947 TRIM13O60858 407 aa12.81□□□□□ -0.36
SIN3A-202ENST00000394947 USP1O94782 785 aa12.81□□□□□ -0.36
SIN3A-202ENST00000394947 CYP19A1P11511 503 aaPredicted RBP12.81□□□□□ -0.36
SIN3A-202ENST00000394947 TUBGCP3Q96CW5 907 aa12.81□□□□□ -0.36
SIN3A-202ENST00000394947 SENP7Q9BQF6 1050 aa12.81□□□□□ -0.36
SIN3A-202ENST00000394947 IMPAD1Q9NX62 359 aa12.81□□□□□ -0.36
SIN3A-202ENST00000394947 AGO2Q9UKV8 859 aaKnown RBP12.81□□□□□ -0.36
SIN3A-202ENST00000394947 SYCP2Q9BX26 1530 aa12.81□□□□□ -0.36
SIN3A-202ENST00000394947 MYO3BQ8WXR4 1341 aa12.81□□□□□ -0.36
SIN3A-202ENST00000394947 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.81□□□□□ -0.36
SIN3A-202ENST00000394947 CCDC188H7C350 402 aa12.81□□□□□ -0.36
SIN3A-202ENST00000394947 STXBP3O00186 592 aa12.81□□□□□ -0.36
SIN3A-202ENST00000394947 EEF2KO00418 725 aaKnown RBP12.81□□□□□ -0.36
SIN3A-202ENST00000394947 YWHAZP63104 245 aaKnown RBP12.81□□□□□ -0.36
SIN3A-202ENST00000394947 COX10Q12887 443 aa12.81□□□□□ -0.36
SIN3A-202ENST00000394947 TOMM20Q15388 145 aa12.81□□□□□ -0.36
SIN3A-202ENST00000394947 DIS3Q9Y2L1 958 aaKnown RBP12.81□□□□□ -0.36
SIN3A-202ENST00000394947 SH3BP1Q9Y3L3 701 aa12.81□□□□□ -0.36
SIN3A-202ENST00000394947 RHOBTB1O94844 696 aa12.81□□□□□ -0.36
SIN3A-202ENST00000394947 SCP2P22307 547 aa12.81□□□□□ -0.36
SIN3A-202ENST00000394947 NUDT2P50583 147 aa12.81□□□□□ -0.36
SIN3A-202ENST00000394947 PTK7Q13308 1070 aa12.81□□□□□ -0.36
SIN3A-202ENST00000394947 RAET1EQ8TD07 263 aa12.81□□□□□ -0.36
SIN3A-202ENST00000394947 WWP1Q9H0M0 922 aa12.81□□□□□ -0.36
SIN3A-202ENST00000394947 KLHL31Q9H511 634 aa12.81□□□□□ -0.36
SIN3A-202ENST00000394947 MAP3K20Q9NYL2 800 aaKnown RBP12.81□□□□□ -0.36
SIN3A-202ENST00000394947 TDP2O95551 362 aa12.8□□□□□ -0.36
SIN3A-202ENST00000394947 FGFR2P21802 821 aa12.8□□□□□ -0.36
SIN3A-202ENST00000394947 ABCE1P61221 599 aaKnown RBP12.8□□□□□ -0.36
SIN3A-202ENST00000394947 MAPK11Q15759 364 aa12.8□□□□□ -0.36
SIN3A-202ENST00000394947 ADGRF4Q8IZF3 695 aa12.8□□□□□ -0.36
SIN3A-202ENST00000394947 ECSITQ9BQ95 431 aa12.8□□□□□ -0.36
SIN3A-202ENST00000394947 EIF2AK1Q9BQI3 630 aaKnown RBP12.8□□□□□ -0.36
SIN3A-202ENST00000394947 CYP4F12Q9HCS2 524 aa12.8□□□□□ -0.36
SIN3A-202ENST00000394947 DDX56Q9NY93 547 aaKnown RBP12.8□□□□□ -0.36
SIN3A-202ENST00000394947 DLGAP2Q9P1A6 1054 aa12.8□□□□□ -0.36
SIN3A-202ENST00000394947 SLC25A13Q9UJS0 675 aa12.8□□□□□ -0.36
SIN3A-202ENST00000394947 TFR2Q9UP52 801 aa12.8□□□□□ -0.36
SIN3A-202ENST00000394947 SLC9A8Q9Y2E8 581 aa12.8□□□□□ -0.36
SIN3A-202ENST00000394947 A0A1B0GW55 424 aa12.8□□□□□ -0.36
SIN3A-202ENST00000394947 DUX4L2P0CJ85 424 aa12.8□□□□□ -0.36
SIN3A-202ENST00000394947 DUX4L3P0CJ86 424 aa12.8□□□□□ -0.36
SIN3A-202ENST00000394947 DUX4L4P0CJ87 422 aa12.8□□□□□ -0.36
SIN3A-202ENST00000394947 DUX4L5P0CJ88 424 aa12.8□□□□□ -0.36
SIN3A-202ENST00000394947 DUX4L6P0CJ89 424 aa12.8□□□□□ -0.36
SIN3A-202ENST00000394947 DUX4L7P0CJ90 424 aa12.8□□□□□ -0.36
SIN3A-202ENST00000394947 HSD17B4P51659 736 aa12.8□□□□□ -0.36
SIN3A-202ENST00000394947 RBBP4Q09028 425 aa12.8□□□□□ -0.36
SIN3A-202ENST00000394947 COG2Q14746 738 aa12.8□□□□□ -0.36
SIN3A-202ENST00000394947 SMIM5Q71RC9 77 aa12.8□□□□□ -0.36
SIN3A-202ENST00000394947 BBS7Q8IWZ6 715 aa12.8□□□□□ -0.36
SIN3A-202ENST00000394947 GPD1LQ8N335 351 aa12.8□□□□□ -0.36
SIN3A-202ENST00000394947 KCTD10Q9H3F6 313 aa12.8□□□□□ -0.36
SIN3A-202ENST00000394947 DIABLOQ9NR28 239 aa12.8□□□□□ -0.36
SIN3A-202ENST00000394947 RNF146Q9NTX7 359 aa12.8□□□□□ -0.36
SIN3A-202ENST00000394947 DUX4Q9UBX2 424 aa12.8□□□□□ -0.36
SIN3A-202ENST00000394947 C3orf70A6NLC5 250 aaPredicted RBP12.8□□□□□ -0.36
SIN3A-202ENST00000394947 TRIM66O15016 1216 aa12.8□□□□□ -0.36
SIN3A-202ENST00000394947 ALOX15P16050 662 aaPredicted RBP12.8□□□□□ -0.36
SIN3A-202ENST00000394947 OR1G1P47890 313 aa12.8□□□□□ -0.36
SIN3A-202ENST00000394947 KCNK10P57789 538 aa12.8□□□□□ -0.36
SIN3A-202ENST00000394947 RASGRF1Q13972 1273 aa12.8□□□□□ -0.36
SIN3A-202ENST00000394947 TTC33Q6PID6 262 aaPredicted RBP12.8□□□□□ -0.36
SIN3A-202ENST00000394947 SYNE4Q8N205 404 aa12.8□□□□□ -0.36
SIN3A-202ENST00000394947 ERP27Q96DN0 273 aa12.8□□□□□ -0.36
SIN3A-202ENST00000394947 PI4K2AQ9BTU6 479 aa12.8□□□□□ -0.36
SIN3A-202ENST00000394947 KLHL1Q9NR64 748 aa12.8□□□□□ -0.36
SIN3A-202ENST00000394947 SLC39A10Q9ULF5 831 aa12.8□□□□□ -0.36
SIN3A-202ENST00000394947 ITIH6Q6UXX5 1313 aa12.8□□□□□ -0.36
SIN3A-202ENST00000394947 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.8□□□□□ -0.36
SIN3A-202ENST00000394947 FAM107AO95990 144 aa12.8□□□□□ -0.36
SIN3A-202ENST00000394947 ZCCHC18P0CG32 403 aa12.8□□□□□ -0.36
SIN3A-202ENST00000394947 FNTAP49354 379 aa12.8□□□□□ -0.36
SIN3A-202ENST00000394947 PRIM2P49643 509 aa12.8□□□□□ -0.36
SIN3A-202ENST00000394947 KLK7P49862 253 aa12.8□□□□□ -0.36
SIN3A-202ENST00000394947 DEFA1P59665 94 aa12.8□□□□□ -0.36
SIN3A-202ENST00000394947 DEFA3P59666 94 aa12.8□□□□□ -0.36
SIN3A-202ENST00000394947 SPP2Q13103 211 aa12.8□□□□□ -0.36
SIN3A-202ENST00000394947 TTLL4Q14679 1199 aa12.8□□□□□ -0.36
SIN3A-202ENST00000394947 WDR72Q3MJ13 1102 aa12.8□□□□□ -0.36
SIN3A-202ENST00000394947 FAM160B2Q86V87 743 aa12.8□□□□□ -0.36
SIN3A-202ENST00000394947 KIRREL3Q8IZU9 778 aa12.8□□□□□ -0.36
SIN3A-202ENST00000394947 SLC35G2Q8TBE7 412 aa12.8□□□□□ -0.36
SIN3A-202ENST00000394947 WNT8AQ9H1J5 351 aa12.8□□□□□ -0.36
SIN3A-202ENST00000394947 RRN3P2A6NIE6 340 aa12.8□□□□□ -0.36
SIN3A-202ENST00000394947 CCNIQ14094 377 aa12.8□□□□□ -0.36
SIN3A-202ENST00000394947 TYW3Q6IPR3 259 aaKnown RBP12.8□□□□□ -0.36
SIN3A-202ENST00000394947 NLRP10Q86W26 655 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms