RNA–Protein interactions for RNA: ENST00000394597.6

RFFL-202, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFFL, Length 4,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-202ENST00000394597 A0A1W2PQJ5 194 aa6.01□□□□□ -1.45
RFFL-202ENST00000394597 MANSC4A6NHS7 340 aaPredicted RBP6.01□□□□□ -1.45
RFFL-202ENST00000394597 SPDYE5A6NIY4 337 aa6.01□□□□□ -1.45
RFFL-202ENST00000394597 DNM1LO00429 736 aa6.01□□□□□ -1.45
RFFL-202ENST00000394597 THAP12O43422 761 aa6.01□□□□□ -1.45
RFFL-202ENST00000394597 TRAPPC3O43617 180 aa6.01□□□□□ -1.45
RFFL-202ENST00000394597 GAS2O43903 313 aaKnown RBP6.01□□□□□ -1.45
RFFL-202ENST00000394597 TRPA1O75762 1119 aa6.01□□□□□ -1.45
RFFL-202ENST00000394597 CYP2C8P10632 490 aa6.01□□□□□ -1.45
RFFL-202ENST00000394597 MAPTP10636 758 aaKnown RBP6.01□□□□□ -1.45
RFFL-202ENST00000394597 ESRRAP11474 423 aaPredicted RBP6.01□□□□□ -1.45
RFFL-202ENST00000394597 ITGB5P18084 799 aa6.01□□□□□ -1.45
RFFL-202ENST00000394597 FNTAP49354 379 aa6.01□□□□□ -1.45
RFFL-202ENST00000394597 GPC3P51654 580 aa6.01□□□□□ -1.45
RFFL-202ENST00000394597 AP3M2P53677 418 aa6.01□□□□□ -1.45
RFFL-202ENST00000394597 RNASELQ05823 741 aaKnown RBP6.01□□□□□ -1.45
RFFL-202ENST00000394597 ITIH4Q14624 930 aa6.01□□□□□ -1.45
RFFL-202ENST00000394597 KBTBD12Q3ZCT8 623 aa6.01□□□□□ -1.45
RFFL-202ENST00000394597 METTL7BQ6UX53 244 aa6.01□□□□□ -1.45
RFFL-202ENST00000394597 SESTD1Q86VW0 696 aa6.01□□□□□ -1.45
RFFL-202ENST00000394597 FBXL13Q8NEE6 735 aa6.01□□□□□ -1.45
RFFL-202ENST00000394597 SPATA20Q8TB22 786 aa6.01□□□□□ -1.45
RFFL-202ENST00000394597 ZNF507Q8TCN5 953 aa6.01□□□□□ -1.45
RFFL-202ENST00000394597 CAVIN3Q969G5 261 aa6.01□□□□□ -1.45
RFFL-202ENST00000394597 PBKQ96KB5 322 aa6.01□□□□□ -1.45
RFFL-202ENST00000394597 MAF1Q9H063 256 aa6.01□□□□□ -1.45
RFFL-202ENST00000394597 HESX1Q9UBX0 185 aa6.01□□□□□ -1.45
RFFL-202ENST00000394597 PACSIN2Q9UNF0 486 aaPredicted RBP6.01□□□□□ -1.45
RFFL-202ENST00000394597 MYH13Q9UKX3 1938 aa6.01□□□□□ -1.45
RFFL-202ENST00000394597 CCDC188H7C350 402 aa6.01□□□□□ -1.45
RFFL-202ENST00000394597 ACADSP16219 412 aa6.01□□□□□ -1.45
RFFL-202ENST00000394597 GSTT1P30711 240 aa6.01□□□□□ -1.45
RFFL-202ENST00000394597 NOVP48745 357 aa6.01□□□□□ -1.45
RFFL-202ENST00000394597 ERFP50548 548 aa6.01□□□□□ -1.45
RFFL-202ENST00000394597 PMS1P54277 932 aaKnown RBP6.01□□□□□ -1.45
RFFL-202ENST00000394597 SNRNP35Q16560 246 aaKnown RBP6.01□□□□□ -1.45
RFFL-202ENST00000394597 NOL9Q5SY16 702 aaKnown RBP6.01□□□□□ -1.45
RFFL-202ENST00000394597 HYIQ5T013 277 aa6.01□□□□□ -1.45
RFFL-202ENST00000394597 EFCAB12Q6NXP0 572 aa6.01□□□□□ -1.45
RFFL-202ENST00000394597 ENOSF1Q7L5Y1 443 aa6.01□□□□□ -1.45
RFFL-202ENST00000394597 DDX42Q86XP3 938 aaKnown RBP eCLIP6.01□□□□□ -1.45
RFFL-202ENST00000394597 FBXO16Q8IX29 292 aaPredicted RBP6.01□□□□□ -1.45
RFFL-202ENST00000394597 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP6.01□□□□□ -1.45
RFFL-202ENST00000394597 LZICQ8WZA0 190 aa6.01□□□□□ -1.45
RFFL-202ENST00000394597 USP6NLQ92738 828 aa6.01□□□□□ -1.45
RFFL-202ENST00000394597 TGS1Q96RS0 853 aaKnown RBP6.01□□□□□ -1.45
RFFL-202ENST00000394597 NDNQ99608 321 aa6.01□□□□□ -1.45
RFFL-202ENST00000394597 HSD17B14Q9BPX1 270 aa6.01□□□□□ -1.45
RFFL-202ENST00000394597 GPRC5CQ9NQ84 441 aa6.01□□□□□ -1.45
RFFL-202ENST00000394597 CASZ1Q86V15 1759 aa6.01□□□□□ -1.45
RFFL-202ENST00000394597 DPPA5A6NC42 116 aa6.01□□□□□ -1.45
RFFL-202ENST00000394597 SPECC1L-ADORA2AF8WAN1 911 aa6.01□□□□□ -1.45
RFFL-202ENST00000394597 LIN7AO14910 233 aaPredicted RBP6.01□□□□□ -1.45
RFFL-202ENST00000394597 PDE5AO76074 875 aa6.01□□□□□ -1.45
RFFL-202ENST00000394597 SLC26A2P50443 739 aa6.01□□□□□ -1.45
RFFL-202ENST00000394597 UAP1Q16222 522 aaPredicted RBP6.01□□□□□ -1.45
RFFL-202ENST00000394597 DGKDQ16760 1214 aa6.01□□□□□ -1.45
RFFL-202ENST00000394597 KYAT1Q16773 422 aa6.01□□□□□ -1.45
RFFL-202ENST00000394597 DUOXA2Q1HG44 320 aa6.01□□□□□ -1.45
RFFL-202ENST00000394597 GRAMD1BQ3KR37 738 aa6.01□□□□□ -1.45
RFFL-202ENST00000394597 TREML2Q5T2D2 321 aa6.01□□□□□ -1.45
RFFL-202ENST00000394597 GALNT15Q8N3T1 639 aa6.01□□□□□ -1.45
RFFL-202ENST00000394597 TRAF3IP1Q8TDR0 691 aaPredicted RBP6.01□□□□□ -1.45
RFFL-202ENST00000394597 C12orf42Q96LP6 360 aa6.01□□□□□ -1.45
RFFL-202ENST00000394597 DUSP9Q99956 384 aaKnown RBP6.01□□□□□ -1.45
RFFL-202ENST00000394597 SENP7Q9BQF6 1050 aa6.01□□□□□ -1.45
RFFL-202ENST00000394597 STK33Q9BYT3 514 aa6.01□□□□□ -1.45
RFFL-202ENST00000394597 DUSP10Q9Y6W6 482 aa6.01□□□□□ -1.45
RFFL-202ENST00000394597 ARHGAP10A1A4S6 786 aa6.01□□□□□ -1.45
RFFL-202ENST00000394597 ADAMTS3O15072 1205 aa6.01□□□□□ -1.45
RFFL-202ENST00000394597 MED7O43513 233 aa6.01□□□□□ -1.45
RFFL-202ENST00000394597 ADCY3O60266 1144 aa6.01□□□□□ -1.45
RFFL-202ENST00000394597 SMNDC1O75940 238 aaKnown RBP eCLIP6.01□□□□□ -1.45
RFFL-202ENST00000394597 SPATA31C1P0DKV0 1188 aa6.01□□□□□ -1.45
RFFL-202ENST00000394597 UCHL3P15374 230 aa6.01□□□□□ -1.45
RFFL-202ENST00000394597 SLC9A1P19634 815 aa6.01□□□□□ -1.45
RFFL-202ENST00000394597 SOX5P35711 763 aa6.01□□□□□ -1.45
RFFL-202ENST00000394597 NPTX2P47972 431 aa6.01□□□□□ -1.45
RFFL-202ENST00000394597 KCNJ2P63252 427 aa6.01□□□□□ -1.45
RFFL-202ENST00000394597 GFPT1Q06210 699 aaPredicted RBP6.01□□□□□ -1.45
RFFL-202ENST00000394597 MYBPC2Q14324 1141 aa6.01□□□□□ -1.45
RFFL-202ENST00000394597 MESDQ14696 234 aa6.01□□□□□ -1.45
RFFL-202ENST00000394597 KPNB1Q14974 876 aaKnown RBP6.01□□□□□ -1.45
RFFL-202ENST00000394597 LY6KQ17RY6 165 aa6.01□□□□□ -1.45
RFFL-202ENST00000394597 ZNF667Q5HYK9 610 aa6.01□□□□□ -1.45
RFFL-202ENST00000394597 ZNF484Q5JVG2 852 aa6.01□□□□□ -1.45
RFFL-202ENST00000394597 TMCO4Q5TGY1 634 aa6.01□□□□□ -1.45
RFFL-202ENST00000394597 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.01□□□□□ -1.45
RFFL-202ENST00000394597 RFX8Q6ZV50 586 aa6.01□□□□□ -1.45
RFFL-202ENST00000394597 C1orf186Q6ZWK4 172 aa6.01□□□□□ -1.45
RFFL-202ENST00000394597 IL31RAQ8NI17 732 aa6.01□□□□□ -1.45
RFFL-202ENST00000394597 GFM2Q969S9 779 aaKnown RBP6.01□□□□□ -1.45
RFFL-202ENST00000394597 DNAJC19Q96DA6 116 aa6.01□□□□□ -1.45
RFFL-202ENST00000394597 ERP27Q96DN0 273 aa6.01□□□□□ -1.45
RFFL-202ENST00000394597 RILPQ96NA2 401 aa6.01□□□□□ -1.45
RFFL-202ENST00000394597 PURBQ96QR8 312 aaKnown RBP6.01□□□□□ -1.45
RFFL-202ENST00000394597 OSBPL7Q9BZF2 842 aa6.01□□□□□ -1.45
RFFL-202ENST00000394597 UBAP1Q9NZ09 502 aa6.01□□□□□ -1.45
RFFL-202ENST00000394597 CPA4Q9UI42 421 aa6.01□□□□□ -1.45
RFFL-202ENST00000394597 TRAF3IP3Q9Y228 551 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms