RNA–Protein interactions for RNA: ENST00000394440.7

CCT4-201, Transcript of chaperonin containing TCP1 subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCT4, Length 2,520 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT4-201ENST00000394440 UVRAGQ9P2Y5 699 aa15.98■□□□□ 0.15
CCT4-201ENST00000394440 AMFRQ9UKV5 643 aa15.98■□□□□ 0.15
CCT4-201ENST00000394440 PGK1P00558 417 aa15.98■□□□□ 0.15
CCT4-201ENST00000394440 RHOXF2BP0C7M4 288 aa15.98■□□□□ 0.15
CCT4-201ENST00000394440 PAFAH1B1P43034 410 aa15.98■□□□□ 0.15
CCT4-201ENST00000394440 DNA2P51530 1060 aa15.98■□□□□ 0.15
CCT4-201ENST00000394440 CCDC181Q5TID7 509 aa15.98■□□□□ 0.15
CCT4-201ENST00000394440 APBB1IPQ7Z5R6 666 aaPredicted RBP15.98■□□□□ 0.15
CCT4-201ENST00000394440 MCOLN2Q8IZK6 566 aa15.98■□□□□ 0.15
CCT4-201ENST00000394440 CYFIP2Q96F07 1278 aa15.98■□□□□ 0.15
CCT4-201ENST00000394440 PBKQ96KB5 322 aa15.98■□□□□ 0.15
CCT4-201ENST00000394440 RHOXF2Q9BQY4 288 aa15.98■□□□□ 0.15
CCT4-201ENST00000394440 CCDC94Q9BW85 323 aaPredicted RBP15.98■□□□□ 0.15
CCT4-201ENST00000394440 PLEKHA5Q9HAU0 1116 aa15.98■□□□□ 0.15
CCT4-201ENST00000394440 AVENQ9NQS1 362 aaPredicted RBP15.98■□□□□ 0.15
CCT4-201ENST00000394440 ARGLU1Q9NWB6 273 aaPredicted RBP15.98■□□□□ 0.15
CCT4-201ENST00000394440 GTF2IRD1Q9UHL9 959 aa15.98■□□□□ 0.15
CCT4-201ENST00000394440 POLIQ9UNA4 740 aa15.98■□□□□ 0.15
CCT4-201ENST00000394440 KCNK3O14649 394 aa15.97■□□□□ 0.15
CCT4-201ENST00000394440 DDX3YO15523 660 aaKnown RBP15.97■□□□□ 0.15
CCT4-201ENST00000394440 CLSTN1O94985 981 aa15.97■□□□□ 0.15
CCT4-201ENST00000394440 STAU1O95793 577 aaKnown RBP15.97■□□□□ 0.15
CCT4-201ENST00000394440 KRT19P08727 400 aa15.97■□□□□ 0.15
CCT4-201ENST00000394440 ATICP31939 592 aa15.97■□□□□ 0.15
CCT4-201ENST00000394440 CRYBB1P53674 252 aaPredicted RBP15.97■□□□□ 0.15
CCT4-201ENST00000394440 PTPROQ16827 1216 aa15.97■□□□□ 0.15
CCT4-201ENST00000394440 ZNF667Q5HYK9 610 aa15.97■□□□□ 0.15
CCT4-201ENST00000394440 TAF2Q6P1X5 1199 aa15.97■□□□□ 0.15
CCT4-201ENST00000394440 MON1BQ7L1V2 547 aa15.97■□□□□ 0.15
CCT4-201ENST00000394440 ZNF606Q8WXB4 792 aa15.97■□□□□ 0.15
CCT4-201ENST00000394440 SNX27Q96L92 541 aa15.97■□□□□ 0.15
CCT4-201ENST00000394440 PRDM10Q9NQV6 1147 aa15.97■□□□□ 0.15
CCT4-201ENST00000394440 RNF186Q9NXI6 227 aa15.97■□□□□ 0.15
CCT4-201ENST00000394440 ITGA11Q9UKX5 1188 aa15.97■□□□□ 0.15
CCT4-201ENST00000394440 WEE2P0C1S8 567 aa15.97■□□□□ 0.15
CCT4-201ENST00000394440 RARBP10826 455 aa15.97■□□□□ 0.15
CCT4-201ENST00000394440 CD58P19256 250 aa15.97■□□□□ 0.15
CCT4-201ENST00000394440 NAA35Q5VZE5 725 aa15.97■□□□□ 0.15
CCT4-201ENST00000394440 CXCL17Q6UXB2 119 aa15.97■□□□□ 0.15
CCT4-201ENST00000394440 SCARA5Q6ZMJ2 495 aa15.97■□□□□ 0.15
CCT4-201ENST00000394440 ZNF564Q8TBZ8 553 aaPredicted RBP15.97■□□□□ 0.15
CCT4-201ENST00000394440 ZSWIM1Q9BR11 485 aa15.97■□□□□ 0.15
CCT4-201ENST00000394440 NUP85Q9BW27 656 aa15.97■□□□□ 0.15
CCT4-201ENST00000394440 ZNF446Q9NWS9 450 aa15.97■□□□□ 0.15
CCT4-201ENST00000394440 CHORDC1Q9UHD1 332 aaPredicted RBP15.97■□□□□ 0.15
CCT4-201ENST00000394440 DERAQ9Y315 318 aa15.97■□□□□ 0.15
CCT4-201ENST00000394440 CCDC151A5D8V7 595 aa15.96■□□□□ 0.15
CCT4-201ENST00000394440 THAP12O43422 761 aa15.96■□□□□ 0.15
CCT4-201ENST00000394440 RASGEF1CQ8N431 466 aa15.96■□□□□ 0.15
CCT4-201ENST00000394440 ACTRT1Q8TDG2 376 aa15.96■□□□□ 0.15
CCT4-201ENST00000394440 BEGAINQ9BUH8 593 aa15.96■□□□□ 0.15
CCT4-201ENST00000394440 SDCBP2Q9H190 292 aa15.96■□□□□ 0.15
CCT4-201ENST00000394440 CXCL16Q9H2A7 254 aa15.96■□□□□ 0.15
CCT4-201ENST00000394440 SNTG2Q9NY99 539 aa15.96■□□□□ 0.15
CCT4-201ENST00000394440 CNOT8Q9UFF9 292 aaKnown RBP15.96■□□□□ 0.15
CCT4-201ENST00000394440 ALG6Q9Y672 507 aa15.96■□□□□ 0.15
CCT4-201ENST00000394440 TARSL2A2RTX5 802 aaKnown RBP15.96■□□□□ 0.14
CCT4-201ENST00000394440 CAPN15O75808 1086 aa15.96■□□□□ 0.14
CCT4-201ENST00000394440 MYBL1P10243 752 aa15.96■□□□□ 0.14
CCT4-201ENST00000394440 POLR2BP30876 1174 aaKnown RBP15.96■□□□□ 0.14
CCT4-201ENST00000394440 YWHAEP62258 255 aaKnown RBP15.96■□□□□ 0.14
CCT4-201ENST00000394440 ZBTB6Q15916 424 aa15.96■□□□□ 0.14
CCT4-201ENST00000394440 NBPF20Q3BBV1 942 aa15.96■□□□□ 0.14
CCT4-201ENST00000394440 WDR72Q3MJ13 1102 aa15.96■□□□□ 0.14
CCT4-201ENST00000394440 WDR93Q6P2C0 686 aa15.96■□□□□ 0.14
CCT4-201ENST00000394440 ALKAL1Q6UXT8 129 aa15.96■□□□□ 0.14
CCT4-201ENST00000394440 PHF13Q86YI8 300 aaPredicted RBP15.96■□□□□ 0.14
CCT4-201ENST00000394440 CPA5Q8WXQ8 436 aa15.96■□□□□ 0.14
CCT4-201ENST00000394440 TRIM11Q96F44 468 aa15.96■□□□□ 0.14
CCT4-201ENST00000394440 SPC25Q9HBM1 224 aa15.96■□□□□ 0.14
CCT4-201ENST00000394440 NXF1Q9UBU9 619 aaKnown RBP15.96■□□□□ 0.14
CCT4-201ENST00000394440 TMEM59LQ9UK28 342 aa15.96■□□□□ 0.14
CCT4-201ENST00000394440 TUBBP07437 444 aa15.95■□□□□ 0.14
CCT4-201ENST00000394440 CCND3P30281 292 aaPredicted RBP15.95■□□□□ 0.14
CCT4-201ENST00000394440 NSFP46459 744 aaKnown RBP15.95■□□□□ 0.14
CCT4-201ENST00000394440 GUCY2FP51841 1108 aa15.95■□□□□ 0.14
CCT4-201ENST00000394440 LBX1P52954 281 aa15.95■□□□□ 0.14
CCT4-201ENST00000394440 PTP4A2Q12974 167 aa15.95■□□□□ 0.14
CCT4-201ENST00000394440 BRD3Q15059 726 aa15.95■□□□□ 0.14
CCT4-201ENST00000394440 UBXN11Q5T124 520 aa15.95■□□□□ 0.14
CCT4-201ENST00000394440 CCSAPQ6IQ19 270 aaPredicted RBP15.95■□□□□ 0.14
CCT4-201ENST00000394440 PPP1R2P3Q6NXS1 205 aa15.95■□□□□ 0.14
CCT4-201ENST00000394440 USP38Q8NB14 1042 aa15.95■□□□□ 0.14
CCT4-201ENST00000394440 KLHDC9Q8NEP7 349 aa15.95■□□□□ 0.14
CCT4-201ENST00000394440 KIF12Q96FN5 646 aa15.95■□□□□ 0.14
CCT4-201ENST00000394440 VCPIP1Q96JH7 1222 aa15.95■□□□□ 0.14
CCT4-201ENST00000394440 ZMAT2Q96NC0 199 aaKnown RBP15.95■□□□□ 0.14
CCT4-201ENST00000394440 RPS6KC1Q96S38 1066 aa15.95■□□□□ 0.14
CCT4-201ENST00000394440 NXF3Q9H4D5 531 aaKnown RBP15.95■□□□□ 0.14
CCT4-201ENST00000394440 RBM12Q9NTZ6 932 aaKnown RBP15.95■□□□□ 0.14
CCT4-201ENST00000394440 DPP3Q9NY33 737 aa15.95■□□□□ 0.14
CCT4-201ENST00000394440 ZRANB2O95218 330 aaKnown RBP eCLIP15.95■□□□□ 0.14
CCT4-201ENST00000394440 PRKAR2AP13861 404 aaKnown RBP15.95■□□□□ 0.14
CCT4-201ENST00000394440 CST5P28325 142 aaPredicted RBP15.95■□□□□ 0.14
CCT4-201ENST00000394440 VSNL1P62760 191 aa15.95■□□□□ 0.14
CCT4-201ENST00000394440 DCAF12L1Q5VU92 463 aa15.95■□□□□ 0.14
CCT4-201ENST00000394440 GDF6Q6KF10 455 aaPredicted RBP15.95■□□□□ 0.14
CCT4-201ENST00000394440 CELF4Q9BZC1 486 aaKnown RBP15.95■□□□□ 0.14
CCT4-201ENST00000394440 XPNPEP3Q9NQH7 507 aa15.95■□□□□ 0.14
CCT4-201ENST00000394440 CNTN3Q9P232 1028 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms