RNA–Protein interactions for RNA: ENST00000394331.3

HOXC6-202, Transcript of homeobox C6, humanhuman

TSL 1 (best) BASIC

Gene HOXC6, Length 2,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-202ENST00000394331 NLRP9Q7RTR0 991 aa19.96■□□□□ 0.79
HOXC6-202ENST00000394331 FLAD1Q8NFF5 587 aa19.96■□□□□ 0.79
HOXC6-202ENST00000394331 ECSITQ9BQ95 431 aa19.96■□□□□ 0.79
HOXC6-202ENST00000394331 OLFML3Q9NRN5 406 aa19.96■□□□□ 0.79
HOXC6-202ENST00000394331 ATRNL1Q5VV63 1379 aa19.96■□□□□ 0.79
HOXC6-202ENST00000394331 SIPA1L1O43166 1804 aa19.96■□□□□ 0.79
HOXC6-202ENST00000394331 FRMPD4Q14CM0 1322 aa19.96■□□□□ 0.79
HOXC6-202ENST00000394331 ANKRD63C9JTQ0 380 aa19.96■□□□□ 0.79
HOXC6-202ENST00000394331 TP73O15350 636 aa19.96■□□□□ 0.79
HOXC6-202ENST00000394331 EXOC3O60645 756 aa19.96■□□□□ 0.79
HOXC6-202ENST00000394331 AKAP3O75969 853 aa19.96■□□□□ 0.79
HOXC6-202ENST00000394331 GCNT3O95395 438 aa19.96■□□□□ 0.79
HOXC6-202ENST00000394331 ZCCHC18P0CG32 403 aa19.96■□□□□ 0.79
HOXC6-202ENST00000394331 ITIH2P19823 946 aa19.96■□□□□ 0.79
HOXC6-202ENST00000394331 MAP3K10Q02779 954 aa19.96■□□□□ 0.79
HOXC6-202ENST00000394331 DNAJC3Q13217 504 aa19.96■□□□□ 0.79
HOXC6-202ENST00000394331 CCDC25Q86WR0 208 aa19.96■□□□□ 0.79
HOXC6-202ENST00000394331 LNX1Q8TBB1 728 aaPredicted RBP19.96■□□□□ 0.79
HOXC6-202ENST00000394331 ZDHHC7Q9NXF8 308 aa19.96■□□□□ 0.79
HOXC6-202ENST00000394331 MTUS1Q9ULD2 1270 aa19.96■□□□□ 0.79
HOXC6-202ENST00000394331 NAALADL1Q9UQQ1 740 aa19.96■□□□□ 0.79
HOXC6-202ENST00000394331 HOXA13P31271 388 aaPredicted RBP19.96■□□□□ 0.79
HOXC6-202ENST00000394331 STAT4Q14765 748 aa19.96■□□□□ 0.79
HOXC6-202ENST00000394331 DCAF17Q5H9S7 520 aaPredicted RBP19.96■□□□□ 0.79
HOXC6-202ENST00000394331 ZNF554Q86TJ5 538 aa19.96■□□□□ 0.79
HOXC6-202ENST00000394331 SRRM1Q8IYB3 904 aaKnown RBP19.96■□□□□ 0.79
HOXC6-202ENST00000394331 CYP4X1Q8N118 509 aa19.96■□□□□ 0.79
HOXC6-202ENST00000394331 ARHGAP24Q8N264 748 aa19.96■□□□□ 0.79
HOXC6-202ENST00000394331 PRR12Q9ULL5 1215 aa19.96■□□□□ 0.79
HOXC6-202ENST00000394331 A0A0J9YVX5 310 aa19.95■□□□□ 0.78
HOXC6-202ENST00000394331 LGR5O75473 907 aa19.95■□□□□ 0.78
HOXC6-202ENST00000394331 RAP1GDS1P52306 607 aa19.95■□□□□ 0.78
HOXC6-202ENST00000394331 EPHA7Q15375 998 aa19.95■□□□□ 0.78
HOXC6-202ENST00000394331 TMEM63BQ5T3F8 832 aa19.95■□□□□ 0.78
HOXC6-202ENST00000394331 RELL1Q8IUW5 271 aa19.95■□□□□ 0.78
HOXC6-202ENST00000394331 RUSC1Q9BVN2 902 aa19.95■□□□□ 0.78
HOXC6-202ENST00000394331 TUFT1Q9NNX1 390 aa19.95■□□□□ 0.78
HOXC6-202ENST00000394331 METTL5Q9NRN9 209 aaKnown RBP19.95■□□□□ 0.78
HOXC6-202ENST00000394331 SMG5Q9UPR3 1016 aaKnown RBP19.95■□□□□ 0.78
HOXC6-202ENST00000394331 GTPBP10A4D1E9 387 aaKnown RBP19.95■□□□□ 0.78
HOXC6-202ENST00000394331 STRNO43815 780 aa19.95■□□□□ 0.78
HOXC6-202ENST00000394331 OATP04181 439 aa19.95■□□□□ 0.78
HOXC6-202ENST00000394331 CCNFP41002 786 aa19.95■□□□□ 0.78
HOXC6-202ENST00000394331 NEK3P51956 506 aa19.95■□□□□ 0.78
HOXC6-202ENST00000394331 RPL26P61254 145 aaKnown RBP19.95■□□□□ 0.78
HOXC6-202ENST00000394331 RASA3Q14644 834 aa19.95■□□□□ 0.78
HOXC6-202ENST00000394331 TCERG1LQ5VWI1 586 aa19.95■□□□□ 0.78
HOXC6-202ENST00000394331 RHOT2Q8IXI1 618 aa19.95■□□□□ 0.78
HOXC6-202ENST00000394331 DDX50Q9BQ39 737 aaKnown RBP19.95■□□□□ 0.78
HOXC6-202ENST00000394331 CCDC77Q9BR77 488 aa19.95■□□□□ 0.78
HOXC6-202ENST00000394331 SYT11Q9BT88 431 aa19.95■□□□□ 0.78
HOXC6-202ENST00000394331 PHACTR1Q9C0D0 580 aa19.95■□□□□ 0.78
HOXC6-202ENST00000394331 SIX2Q9NPC8 291 aa19.95■□□□□ 0.78
HOXC6-202ENST00000394331 RHBDL2Q9NX52 303 aa19.95■□□□□ 0.78
HOXC6-202ENST00000394331 ASTN1O14525 1302 aa19.94■□□□□ 0.78
HOXC6-202ENST00000394331 RSPH10B2B2RC85 870 aa19.94■□□□□ 0.78
HOXC6-202ENST00000394331 EIF3DO15371 548 aaKnown RBP eCLIP19.94■□□□□ 0.78
HOXC6-202ENST00000394331 RSPH10BP0C881 870 aa19.94■□□□□ 0.78
HOXC6-202ENST00000394331 CBX3Q13185 183 aa19.94■□□□□ 0.78
HOXC6-202ENST00000394331 SLC15A2Q16348 729 aa19.94■□□□□ 0.78
HOXC6-202ENST00000394331 MORC4Q8TE76 937 aa19.94■□□□□ 0.78
HOXC6-202ENST00000394331 RSPH1Q8WYR4 309 aa19.94■□□□□ 0.78
HOXC6-202ENST00000394331 AKT1S1Q96B36 256 aa19.94■□□□□ 0.78
HOXC6-202ENST00000394331 ZSWIM1Q9BR11 485 aa19.94■□□□□ 0.78
HOXC6-202ENST00000394331 TDRD3Q9H7E2 651 aaKnown RBP19.94■□□□□ 0.78
HOXC6-202ENST00000394331 SH3GLB1Q9Y371 365 aa19.94■□□□□ 0.78
HOXC6-202ENST00000394331 ZMYM2Q9UBW7 1377 aa19.94■□□□□ 0.78
HOXC6-202ENST00000394331 PLSCR1O15162 318 aa19.94■□□□□ 0.78
HOXC6-202ENST00000394331 DNAJC6O75061 913 aa19.94■□□□□ 0.78
HOXC6-202ENST00000394331 MPP3Q13368 585 aa19.94■□□□□ 0.78
HOXC6-202ENST00000394331 SEL1L2Q5TEA6 688 aa19.94■□□□□ 0.78
HOXC6-202ENST00000394331 RINT1Q6NUQ1 792 aa19.94■□□□□ 0.78
HOXC6-202ENST00000394331 SYDE1Q6ZW31 735 aaPredicted RBP19.94■□□□□ 0.78
HOXC6-202ENST00000394331 CCDC105Q8IYK2 499 aa19.94■□□□□ 0.78
HOXC6-202ENST00000394331 ZDHHC14Q8IZN3 488 aa19.94■□□□□ 0.78
HOXC6-202ENST00000394331 CYP2W1Q8TAV3 490 aa19.94■□□□□ 0.78
HOXC6-202ENST00000394331 PIP4K2CQ8TBX8 421 aa19.94■□□□□ 0.78
HOXC6-202ENST00000394331 SLC35B4Q969S0 331 aa19.94■□□□□ 0.78
HOXC6-202ENST00000394331 SLC35C1Q96A29 364 aa19.94■□□□□ 0.78
HOXC6-202ENST00000394331 HSD17B14Q9BPX1 270 aa19.94■□□□□ 0.78
HOXC6-202ENST00000394331 PAIP2BQ9ULR5 123 aaKnown RBP19.94■□□□□ 0.78
HOXC6-202ENST00000394331 IGSF9BQ9UPX0 1349 aa19.94■□□□□ 0.78
HOXC6-202ENST00000394331 EML1O00423 815 aa19.93■□□□□ 0.78
HOXC6-202ENST00000394331 FAM13AO94988 1023 aa19.93■□□□□ 0.78
HOXC6-202ENST00000394331 VIL1P09327 827 aaKnown RBP19.93■□□□□ 0.78
HOXC6-202ENST00000394331 EIF4BP23588 611 aaKnown RBP19.93■□□□□ 0.78
HOXC6-202ENST00000394331 KRT72Q14CN4 511 aa19.93■□□□□ 0.78
HOXC6-202ENST00000394331 FYB2Q5VWT5 728 aa19.93■□□□□ 0.78
HOXC6-202ENST00000394331 STYK1Q6J9G0 422 aa19.93■□□□□ 0.78
HOXC6-202ENST00000394331 MAML1Q92585 1016 aa19.93■□□□□ 0.78
HOXC6-202ENST00000394331 GFM2Q969S9 779 aaKnown RBP19.93■□□□□ 0.78
HOXC6-202ENST00000394331 MCUR1Q96AQ8 359 aa19.93■□□□□ 0.78
HOXC6-202ENST00000394331 LRRC19Q9H756 370 aa19.93■□□□□ 0.78
HOXC6-202ENST00000394331 TIMMDC1Q9NPL8 285 aa19.93■□□□□ 0.78
HOXC6-202ENST00000394331 IGLV3-22A0A075B6J6 115 aa19.93■□□□□ 0.78
HOXC6-202ENST00000394331 GYG2O15488 501 aa19.93■□□□□ 0.78
HOXC6-202ENST00000394331 STAT1P42224 750 aa19.93■□□□□ 0.78
HOXC6-202ENST00000394331 STAT2P52630 851 aa19.93■□□□□ 0.78
HOXC6-202ENST00000394331 TTLL12Q14166 644 aaPredicted RBP19.93■□□□□ 0.78
HOXC6-202ENST00000394331 KYNUQ16719 465 aa19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms