RNA–Protein interactions for RNA: ENST00000394299.6

GPC3-202, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 2,379 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-202ENST00000394299 ASAP2O43150 1006 aa16.06■□□□□ 0.16
GPC3-202ENST00000394299 PPFIA4O75335 1185 aa16.06■□□□□ 0.16
GPC3-202ENST00000394299 RARAP10276 462 aa16.06■□□□□ 0.16
GPC3-202ENST00000394299 CYP2C19P33261 490 aa16.06■□□□□ 0.16
GPC3-202ENST00000394299 ZNF132P52740 706 aa16.06■□□□□ 0.16
GPC3-202ENST00000394299 DR1Q01658 176 aa16.06■□□□□ 0.16
GPC3-202ENST00000394299 PTP4A2Q12974 167 aa16.06■□□□□ 0.16
GPC3-202ENST00000394299 MAMLD1Q13495 774 aa16.06■□□□□ 0.16
GPC3-202ENST00000394299 ZNF699Q32M78 642 aa16.06■□□□□ 0.16
GPC3-202ENST00000394299 IQCKQ8N0W5 287 aa16.06■□□□□ 0.16
GPC3-202ENST00000394299 GTF3C2Q8WUA4 911 aaPredicted RBP16.06■□□□□ 0.16
GPC3-202ENST00000394299 NLRP7Q8WX94 980 aa16.06■□□□□ 0.16
GPC3-202ENST00000394299 MAGOHBQ96A72 148 aaKnown RBP16.06■□□□□ 0.16
GPC3-202ENST00000394299 PDZD7Q9H5P4 517 aa16.06■□□□□ 0.16
GPC3-202ENST00000394299 RNF19AQ9NV58 838 aa16.06■□□□□ 0.16
GPC3-202ENST00000394299 PLXNA1Q9UIW2 1896 aa16.06■□□□□ 0.16
GPC3-202ENST00000394299 BRCA2P51587 3418 aa16.06■□□□□ 0.16
GPC3-202ENST00000394299 LOC102724159A0A0B4J2E5 919 aa16.06■□□□□ 0.16
GPC3-202ENST00000394299 MYO1FO00160 1098 aa16.06■□□□□ 0.16
GPC3-202ENST00000394299 ASPAP45381 313 aa16.06■□□□□ 0.16
GPC3-202ENST00000394299 RPL7AP62424 266 aaKnown RBP16.06■□□□□ 0.16
GPC3-202ENST00000394299 PWP2Q15269 919 aaKnown RBP16.06■□□□□ 0.16
GPC3-202ENST00000394299 SEL1L2Q5TEA6 688 aa16.06■□□□□ 0.16
GPC3-202ENST00000394299 JADE1Q6IE81 842 aa16.06■□□□□ 0.16
GPC3-202ENST00000394299 PLEKHH3Q7Z736 793 aa16.06■□□□□ 0.16
GPC3-202ENST00000394299 SLC13A5Q86YT5 568 aaPredicted RBP16.06■□□□□ 0.16
GPC3-202ENST00000394299 WDTC1Q8N5D0 677 aa16.06■□□□□ 0.16
GPC3-202ENST00000394299 C1orf127Q8N9H9 656 aa16.06■□□□□ 0.16
GPC3-202ENST00000394299 C1orf131Q8NDD1 294 aaKnown RBP16.06■□□□□ 0.16
GPC3-202ENST00000394299 OR6J1Q8NGC5 347 aa16.06■□□□□ 0.16
GPC3-202ENST00000394299 NIF3L1Q9GZT8 377 aa16.06■□□□□ 0.16
GPC3-202ENST00000394299 USTQ9Y2C2 406 aa16.06■□□□□ 0.16
GPC3-202ENST00000394299 SLC45A1Q9Y2W3 748 aa16.06■□□□□ 0.16
GPC3-202ENST00000394299 SNX24Q9Y343 169 aa16.06■□□□□ 0.16
GPC3-202ENST00000394299 PLXNB2O15031 1838 aa16.06■□□□□ 0.16
GPC3-202ENST00000394299 MGAMO43451 1857 aa16.06■□□□□ 0.16
GPC3-202ENST00000394299 CCDC66A2RUB6 948 aa16.05■□□□□ 0.16
GPC3-202ENST00000394299 DYNC1LI2O43237 492 aaPredicted RBP16.05■□□□□ 0.16
GPC3-202ENST00000394299 B4GALT4O60513 344 aa16.05■□□□□ 0.16
GPC3-202ENST00000394299 HSF2BPO75031 334 aa16.05■□□□□ 0.16
GPC3-202ENST00000394299 CTNNA2P26232 953 aa16.05■□□□□ 0.16
GPC3-202ENST00000394299 PHKA2P46019 1235 aa16.05■□□□□ 0.16
GPC3-202ENST00000394299 AP3M2P53677 418 aa16.05■□□□□ 0.16
GPC3-202ENST00000394299 RWDD2BP57060 319 aa16.05■□□□□ 0.16
GPC3-202ENST00000394299 PPFIA1Q13136 1202 aa16.05■□□□□ 0.16
GPC3-202ENST00000394299 GRM1Q13255 1194 aa16.05■□□□□ 0.16
GPC3-202ENST00000394299 SIX1Q15475 284 aaPredicted RBP16.05■□□□□ 0.16
GPC3-202ENST00000394299 GRIK4Q16099 956 aa16.05■□□□□ 0.16
GPC3-202ENST00000394299 WDR72Q3MJ13 1102 aa16.05■□□□□ 0.16
GPC3-202ENST00000394299 OR2W6PQ8NHA6 318 aa16.05■□□□□ 0.16
GPC3-202ENST00000394299 SCLT1Q96NL6 688 aa16.05■□□□□ 0.16
GPC3-202ENST00000394299 PRMT7Q9NVM4 692 aaPredicted RBP16.05■□□□□ 0.16
GPC3-202ENST00000394299 TNNC2P02585 160 aa16.05■□□□□ 0.16
GPC3-202ENST00000394299 MMP3P08254 477 aa16.05■□□□□ 0.16
GPC3-202ENST00000394299 TCF4P15884 667 aa16.05■□□□□ 0.16
GPC3-202ENST00000394299 GJC1P36383 396 aa16.05■□□□□ 0.16
GPC3-202ENST00000394299 PTGIRP43119 386 aa16.05■□□□□ 0.16
GPC3-202ENST00000394299 TAS2R40P59535 323 aa16.05■□□□□ 0.16
GPC3-202ENST00000394299 NNTQ13423 1086 aa16.05■□□□□ 0.16
GPC3-202ENST00000394299 KIZQ2M2Z5 673 aa16.05■□□□□ 0.16
GPC3-202ENST00000394299 SLC10A6Q3KNW5 377 aa16.05■□□□□ 0.16
GPC3-202ENST00000394299 DUSP28Q4G0W2 176 aa16.05■□□□□ 0.16
GPC3-202ENST00000394299 TTMPQ5BVD1 217 aa16.05■□□□□ 0.16
GPC3-202ENST00000394299 CFAP58Q5T655 872 aa16.05■□□□□ 0.16
GPC3-202ENST00000394299 KCTD16Q68DU8 428 aa16.05■□□□□ 0.16
GPC3-202ENST00000394299 KIAA0319LQ8IZA0 1049 aa16.05■□□□□ 0.16
GPC3-202ENST00000394299 ANKRD36BP1Q96IX9 119 aa16.05■□□□□ 0.16
GPC3-202ENST00000394299 NAP1L3Q99457 506 aaPredicted RBP16.05■□□□□ 0.16
GPC3-202ENST00000394299 SDCBP2Q9H190 292 aa16.05■□□□□ 0.16
GPC3-202ENST00000394299 CDHR5Q9HBB8 845 aa16.05■□□□□ 0.16
GPC3-202ENST00000394299 AVENQ9NQS1 362 aaPredicted RBP16.05■□□□□ 0.16
GPC3-202ENST00000394299 FLRT1Q9NZU1 646 aa16.05■□□□□ 0.16
GPC3-202ENST00000394299 PTPN22Q9Y2R2 807 aa16.05■□□□□ 0.16
GPC3-202ENST00000394299 UTP11Q9Y3A2 253 aaKnown RBP16.05■□□□□ 0.16
GPC3-202ENST00000394299 DOCK3Q8IZD9 2030 aa16.04■□□□□ 0.16
GPC3-202ENST00000394299 GOLGA6L10A0A0M3HER8 536 aa16.04■□□□□ 0.16
GPC3-202ENST00000394299 ITGBL1O95965 494 aaPredicted RBP16.04■□□□□ 0.16
GPC3-202ENST00000394299 ITGB3P05106 788 aa16.04■□□□□ 0.16
GPC3-202ENST00000394299 UAP1Q16222 522 aaPredicted RBP16.04■□□□□ 0.16
GPC3-202ENST00000394299 ATP13A4Q4VNC1 1196 aa16.04■□□□□ 0.16
GPC3-202ENST00000394299 JAMLQ86YT9 394 aa16.04■□□□□ 0.16
GPC3-202ENST00000394299 WHAMMQ8TF30 809 aa16.04■□□□□ 0.16
GPC3-202ENST00000394299 C1orf54Q8WWF1 131 aa16.04■□□□□ 0.16
GPC3-202ENST00000394299 FAM118BQ9BPY3 351 aa16.04■□□□□ 0.16
GPC3-202ENST00000394299 FAM49AQ9H0Q0 323 aaPredicted RBP16.04■□□□□ 0.16
GPC3-202ENST00000394299 TJP2Q9UDY2 1190 aa16.04■□□□□ 0.16
GPC3-202ENST00000394299 MAGEB2O15479 319 aa16.04■□□□□ 0.16
GPC3-202ENST00000394299 PPARDQ03181 441 aa16.04■□□□□ 0.16
GPC3-202ENST00000394299 SNX1Q13596 522 aa16.04■□□□□ 0.16
GPC3-202ENST00000394299 CUL1Q13616 776 aa16.04■□□□□ 0.16
GPC3-202ENST00000394299 DNAJC21Q5F1R6 531 aaKnown RBP16.04■□□□□ 0.16
GPC3-202ENST00000394299 CYP4A22Q5TCH4 519 aa16.04■□□□□ 0.16
GPC3-202ENST00000394299 CCDC137Q6PK04 289 aaKnown RBP16.04■□□□□ 0.16
GPC3-202ENST00000394299 ANKS1BQ7Z6G8 1248 aa16.04■□□□□ 0.16
GPC3-202ENST00000394299 ZNF467Q7Z7K2 595 aaPredicted RBP16.04■□□□□ 0.16
GPC3-202ENST00000394299 PHF13Q86YI8 300 aaPredicted RBP16.04■□□□□ 0.16
GPC3-202ENST00000394299 SH2D3CQ8N5H7 860 aa16.04■□□□□ 0.16
GPC3-202ENST00000394299 EMID1Q96A84 441 aaPredicted RBP16.04■□□□□ 0.16
GPC3-202ENST00000394299 TWNKQ96RR1 684 aa16.04■□□□□ 0.16
GPC3-202ENST00000394299 PARK7Q99497 189 aaKnown RBP16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms