RNA–Protein interactions for RNA: ENST00000394114.2

CASC3-202, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 2,792 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-202ENST00000394114 RGMBQ6NW40 437 aa6.35□□□□□ -1.39
CASC3-202ENST00000394114 NYAP1Q6ZVC0 841 aa6.35□□□□□ -1.39
CASC3-202ENST00000394114 GET4Q7L5D6 327 aaPredicted RBP6.35□□□□□ -1.39
CASC3-202ENST00000394114 FRMD5Q7Z6J6 570 aa6.35□□□□□ -1.39
CASC3-202ENST00000394114 REXO1L1PQ8IX06 675 aa6.35□□□□□ -1.39
CASC3-202ENST00000394114 CACTIN-AS1Q8N1I8 211 aa6.35□□□□□ -1.39
CASC3-202ENST00000394114 LRRC71Q8N4P6 559 aa6.35□□□□□ -1.39
CASC3-202ENST00000394114 MCPH1Q8NEM0 835 aa6.35□□□□□ -1.39
CASC3-202ENST00000394114 NEK11Q8NG66 645 aa6.35□□□□□ -1.39
CASC3-202ENST00000394114 ASAP3Q8TDY4 903 aa6.35□□□□□ -1.39
CASC3-202ENST00000394114 SCFD2Q8WU76 684 aa6.35□□□□□ -1.39
CASC3-202ENST00000394114 SLC7A3Q8WY07 619 aa6.35□□□□□ -1.39
CASC3-202ENST00000394114 KIFAP3Q92845 792 aa6.35□□□□□ -1.39
CASC3-202ENST00000394114 SLC35C1Q96A29 364 aa6.35□□□□□ -1.39
CASC3-202ENST00000394114 BICD1Q96G01 975 aa6.35□□□□□ -1.39
CASC3-202ENST00000394114 FAM84AQ96KN4 292 aa6.35□□□□□ -1.39
CASC3-202ENST00000394114 IRX2Q9BZI1 471 aaPredicted RBP6.35□□□□□ -1.39
CASC3-202ENST00000394114 TBX20Q9UMR3 447 aa6.35□□□□□ -1.39
CASC3-202ENST00000394114 FRMD4BQ9Y2L6 1034 aa6.35□□□□□ -1.39
CASC3-202ENST00000394114 GPC6Q9Y625 555 aaPredicted RBP6.35□□□□□ -1.39
CASC3-202ENST00000394114 KAT6AQ92794 2004 aa6.35□□□□□ -1.39
CASC3-202ENST00000394114 LAMA3Q16787 3333 aa6.35□□□□□ -1.39
CASC3-202ENST00000394114 IGKV6D-21A0A0A0MT36 114 aa6.35□□□□□ -1.39
CASC3-202ENST00000394114 FAM170AA1A519 330 aa6.35□□□□□ -1.39
CASC3-202ENST00000394114 HNRNPDLO14979 420 aaKnown RBP6.35□□□□□ -1.39
CASC3-202ENST00000394114 SNAI1O95863 264 aaPredicted RBP6.35□□□□□ -1.39
CASC3-202ENST00000394114 GJB1P08034 283 aa6.35□□□□□ -1.39
CASC3-202ENST00000394114 CCDC175P0C221 793 aa6.35□□□□□ -1.39
CASC3-202ENST00000394114 ZNF286BP0CG31 522 aa6.35□□□□□ -1.39
CASC3-202ENST00000394114 CCNFP41002 786 aa6.35□□□□□ -1.39
CASC3-202ENST00000394114 DLG4P78352 724 aa6.35□□□□□ -1.39
CASC3-202ENST00000394114 ZBED6P86452 979 aa6.35□□□□□ -1.39
CASC3-202ENST00000394114 GTF2BQ00403 316 aa6.35□□□□□ -1.39
CASC3-202ENST00000394114 GJB7Q6PEY0 223 aa6.35□□□□□ -1.39
CASC3-202ENST00000394114 CYP26C1Q6V0L0 522 aa6.35□□□□□ -1.39
CASC3-202ENST00000394114 SYT10Q6XYQ8 523 aa6.35□□□□□ -1.39
CASC3-202ENST00000394114 PLEKHH3Q7Z736 793 aa6.35□□□□□ -1.39
CASC3-202ENST00000394114 TMTC1Q8IUR5 882 aa6.35□□□□□ -1.39
CASC3-202ENST00000394114 OTUD6BQ8N6M0 293 aa6.35□□□□□ -1.39
CASC3-202ENST00000394114 NPLOC4Q8TAT6 608 aa6.35□□□□□ -1.39
CASC3-202ENST00000394114 LENG1Q96BZ8 264 aaPredicted RBP6.35□□□□□ -1.39
CASC3-202ENST00000394114 CCDC51Q96ER9 411 aa6.35□□□□□ -1.39
CASC3-202ENST00000394114 MAML3Q96JK9 1138 aa6.35□□□□□ -1.39
CASC3-202ENST00000394114 HSH2DQ96JZ2 352 aa6.35□□□□□ -1.39
CASC3-202ENST00000394114 IFT74Q96LB3 600 aa6.35□□□□□ -1.39
CASC3-202ENST00000394114 NUP58Q9BVL2 599 aa6.35□□□□□ -1.39
CASC3-202ENST00000394114 SARGQ9BW04 601 aa6.35□□□□□ -1.39
CASC3-202ENST00000394114 LIN7BQ9HAP6 207 aa6.35□□□□□ -1.39
CASC3-202ENST00000394114 PDLIM7Q9NR12 457 aa6.35□□□□□ -1.39
CASC3-202ENST00000394114 UBE4BO95155 1302 aa6.34□□□□□ -1.39
CASC3-202ENST00000394114 ZSCAN12O43309 604 aa6.34□□□□□ -1.39
CASC3-202ENST00000394114 PAGE1O75459 146 aa6.34□□□□□ -1.39
CASC3-202ENST00000394114 NOL4O94818 638 aa6.34□□□□□ -1.39
CASC3-202ENST00000394114 ADH1AP07327 375 aa6.34□□□□□ -1.39
CASC3-202ENST00000394114 GLRA2P23416 452 aa6.34□□□□□ -1.39
CASC3-202ENST00000394114 ADSSP30520 456 aa6.34□□□□□ -1.39
CASC3-202ENST00000394114 ARHGAP1Q07960 439 aa6.34□□□□□ -1.39
CASC3-202ENST00000394114 FOXB2Q5VYV0 432 aa6.34□□□□□ -1.39
CASC3-202ENST00000394114 IL31Q6EBC2 164 aa6.34□□□□□ -1.39
CASC3-202ENST00000394114 TAPT1Q6NXT6 567 aa6.34□□□□□ -1.39
CASC3-202ENST00000394114 BTLAQ7Z6A9 289 aa6.34□□□□□ -1.39
CASC3-202ENST00000394114 CBWD2Q8IUF1 395 aa6.34□□□□□ -1.39
CASC3-202ENST00000394114 ZNF397Q8NF99 534 aaPredicted RBP6.34□□□□□ -1.39
CASC3-202ENST00000394114 AFG1LQ8WV93 481 aa6.34□□□□□ -1.39
CASC3-202ENST00000394114 CCDC127Q96BQ5 260 aa6.34□□□□□ -1.39
CASC3-202ENST00000394114 EXOC2Q96KP1 924 aa6.34□□□□□ -1.39
CASC3-202ENST00000394114 PPP1R16BQ96T49 567 aa6.34□□□□□ -1.39
CASC3-202ENST00000394114 TIPINQ9BVW5 301 aa6.34□□□□□ -1.39
CASC3-202ENST00000394114 NAA15Q9BXJ9 866 aaKnown RBP6.34□□□□□ -1.39
CASC3-202ENST00000394114 TRIM8Q9BZR9 551 aa6.34□□□□□ -1.39
CASC3-202ENST00000394114 MIR1-1HGQ9H1L0 117 aa6.34□□□□□ -1.39
CASC3-202ENST00000394114 TMEM206Q9H813 350 aa6.34□□□□□ -1.39
CASC3-202ENST00000394114 NRBP2Q9NSY0 501 aa6.34□□□□□ -1.39
CASC3-202ENST00000394114 ZNHIT6Q9NWK9 470 aaKnown RBP6.34□□□□□ -1.39
CASC3-202ENST00000394114 HSPBP1Q9NZL4 362 aa6.34□□□□□ -1.39
CASC3-202ENST00000394114 GCNT4Q9P109 453 aa6.34□□□□□ -1.39
CASC3-202ENST00000394114 FAM184BQ9ULE4 1060 aa6.34□□□□□ -1.39
CASC3-202ENST00000394114 DAAM1Q9Y4D1 1078 aa6.34□□□□□ -1.39
CASC3-202ENST00000394114 SLC16A3O15427 465 aaKnown RBP6.34□□□□□ -1.4
CASC3-202ENST00000394114 ADCY6O43306 1168 aa6.34□□□□□ -1.4
CASC3-202ENST00000394114 STRNO43815 780 aa6.34□□□□□ -1.4
CASC3-202ENST00000394114 LRRN2O75325 713 aa6.34□□□□□ -1.4
CASC3-202ENST00000394114 PNMA6AP0CW24 399 aaPredicted RBP6.34□□□□□ -1.4
CASC3-202ENST00000394114 SRGAP2CP0DJJ0 459 aa6.34□□□□□ -1.4
CASC3-202ENST00000394114 MAPTP10636 758 aaKnown RBP6.34□□□□□ -1.4
CASC3-202ENST00000394114 HARSP12081 509 aaKnown RBP6.34□□□□□ -1.4
CASC3-202ENST00000394114 CYP2B6P20813 491 aa6.34□□□□□ -1.4
CASC3-202ENST00000394114 KCNJ6P48051 423 aa6.34□□□□□ -1.4
CASC3-202ENST00000394114 CYP27A1Q02318 531 aa6.34□□□□□ -1.4
CASC3-202ENST00000394114 TRIM32Q13049 653 aa6.34□□□□□ -1.4
CASC3-202ENST00000394114 GRB14Q14449 540 aa6.34□□□□□ -1.4
CASC3-202ENST00000394114 SETDB1Q15047 1291 aa6.34□□□□□ -1.4
CASC3-202ENST00000394114 PLCB4Q15147 1175 aa6.34□□□□□ -1.4
CASC3-202ENST00000394114 CCL14Q16627 93 aa6.34□□□□□ -1.4
CASC3-202ENST00000394114 EXOC3L4Q17RC7 722 aa6.34□□□□□ -1.4
CASC3-202ENST00000394114 SLC10A6Q3KNW5 377 aa6.34□□□□□ -1.4
CASC3-202ENST00000394114 CBWD6Q4V339 395 aa6.34□□□□□ -1.4
CASC3-202ENST00000394114 CBWD3Q5JTY5 395 aa6.34□□□□□ -1.4
CASC3-202ENST00000394114 CBWD5Q5RIA9 395 aa6.34□□□□□ -1.4
CASC3-202ENST00000394114 SLC39A4Q6P5W5 647 aa6.34□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms