RNA–Protein interactions for RNA: ENST00000393743.7

DDX60-201, Transcript of DExD/H-box helicase 60, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX60, Length 6,071 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX60-201ENST00000393743 MYBPC2Q14324 1141 aa7.55□□□□□ -1.2
DDX60-201ENST00000393743 RBBP7Q16576 425 aa7.55□□□□□ -1.2
DDX60-201ENST00000393743 MGAT5BQ3V5L5 792 aa7.55□□□□□ -1.2
DDX60-201ENST00000393743 KHDRBS2Q5VWX1 349 aaKnown RBP7.55□□□□□ -1.2
DDX60-201ENST00000393743 IL31Q6EBC2 164 aa7.55□□□□□ -1.2
DDX60-201ENST00000393743 PKN3Q6P5Z2 889 aa7.55□□□□□ -1.2
DDX60-201ENST00000393743 ITIH5Q86UX2 942 aa7.55□□□□□ -1.2
DDX60-201ENST00000393743 TRIML2Q8N7C3 387 aa7.55□□□□□ -1.2
DDX60-201ENST00000393743 TNIP2Q8NFZ5 429 aa7.55□□□□□ -1.2
DDX60-201ENST00000393743 ECT2Q9H8V3 914 aa7.55□□□□□ -1.2
DDX60-201ENST00000393743 SYNPO2Q9UMS6 1093 aa7.55□□□□□ -1.2
DDX60-201ENST00000393743 MRFAP1Q9Y605 127 aa7.55□□□□□ -1.2
DDX60-201ENST00000393743 A0A1W2PQJ5 194 aa7.54□□□□□ -1.2
DDX60-201ENST00000393743 TRIM49BA6NDI0 452 aa7.54□□□□□ -1.2
DDX60-201ENST00000393743 DTNBO60941 627 aa7.54□□□□□ -1.2
DDX60-201ENST00000393743 FAM107AO95990 144 aa7.54□□□□□ -1.2
DDX60-201ENST00000393743 TGFB3P10600 412 aa7.54□□□□□ -1.2
DDX60-201ENST00000393743 CAP2P40123 477 aa7.54□□□□□ -1.2
DDX60-201ENST00000393743 OR1G1P47890 313 aa7.54□□□□□ -1.2
DDX60-201ENST00000393743 INPP5AQ14642 412 aa7.54□□□□□ -1.2
DDX60-201ENST00000393743 ACBD5Q5T8D3 534 aaPredicted RBP7.54□□□□□ -1.2
DDX60-201ENST00000393743 ANKRD40Q6AI12 368 aa7.54□□□□□ -1.2
DDX60-201ENST00000393743 ADSSL1Q8N142 457 aa7.54□□□□□ -1.2
DDX60-201ENST00000393743 LINC00116Q8NCU8 138 aa7.54□□□□□ -1.2
DDX60-201ENST00000393743 DNERQ8NFT8 737 aa7.54□□□□□ -1.2
DDX60-201ENST00000393743 TADA1Q96BN2 335 aa7.54□□□□□ -1.2
DDX60-201ENST00000393743 ZDHHC15Q96MV8 337 aa7.54□□□□□ -1.2
DDX60-201ENST00000393743 SEPT5Q99719 369 aaPredicted RBP7.54□□□□□ -1.2
DDX60-201ENST00000393743 TRIM4Q9C037 500 aa7.54□□□□□ -1.2
DDX60-201ENST00000393743 ZFP69BQ9UJL9 534 aa7.54□□□□□ -1.2
DDX60-201ENST00000393743 FBXO2Q9UK22 296 aaPredicted RBP7.54□□□□□ -1.2
DDX60-201ENST00000393743 SYCE1LA8MT33 242 aa7.54□□□□□ -1.2
DDX60-201ENST00000393743 URODP06132 367 aa7.54□□□□□ -1.2
DDX60-201ENST00000393743 TRIM49P0CI25 452 aa7.54□□□□□ -1.2
DDX60-201ENST00000393743 TRIM49CP0CI26 452 aa7.54□□□□□ -1.2
DDX60-201ENST00000393743 ATP1A3P13637 1013 aa7.54□□□□□ -1.2
DDX60-201ENST00000393743 GPD1P21695 349 aa7.54□□□□□ -1.2
DDX60-201ENST00000393743 GNL1P36915 607 aaPredicted RBP7.54□□□□□ -1.2
DDX60-201ENST00000393743 POLD3Q15054 466 aaPredicted RBP7.54□□□□□ -1.2
DDX60-201ENST00000393743 ANO5Q75V66 913 aa7.54□□□□□ -1.2
DDX60-201ENST00000393743 ZBED8Q8IZ13 594 aa7.54□□□□□ -1.2
DDX60-201ENST00000393743 SOCS4Q8WXH5 440 aa7.54□□□□□ -1.2
DDX60-201ENST00000393743 ZNF518BQ9C0D4 1074 aa7.54□□□□□ -1.2
DDX60-201ENST00000393743 XAB2Q9HCS7 855 aaKnown RBP7.54□□□□□ -1.2
DDX60-201ENST00000393743 RRN3Q9NYV6 651 aa7.54□□□□□ -1.2
DDX60-201ENST00000393743 SMARCAL1Q9NZC9 954 aa7.54□□□□□ -1.2
DDX60-201ENST00000393743 MAD2L2Q9UI95 211 aa7.54□□□□□ -1.2
DDX60-201ENST00000393743 CLCA2Q9UQC9 943 aa7.54□□□□□ -1.2
DDX60-201ENST00000393743 PKP3Q9Y446 797 aa7.54□□□□□ -1.2
DDX60-201ENST00000393743 A0A0G2JND7 137 aa7.54□□□□□ -1.2
DDX60-201ENST00000393743 OGTO15294 1046 aa7.54□□□□□ -1.2
DDX60-201ENST00000393743 H2AFYO75367 372 aaKnown RBP7.54□□□□□ -1.2
DDX60-201ENST00000393743 FDFT1P37268 417 aa7.54□□□□□ -1.2
DDX60-201ENST00000393743 NAMPTP43490 491 aa7.54□□□□□ -1.2
DDX60-201ENST00000393743 ARSEP51690 589 aa7.54□□□□□ -1.2
DDX60-201ENST00000393743 OAZ1P54368 228 aa7.54□□□□□ -1.2
DDX60-201ENST00000393743 GFPT1Q06210 699 aaPredicted RBP7.54□□□□□ -1.2
DDX60-201ENST00000393743 TIGD7Q6NT04 549 aaPredicted RBP7.54□□□□□ -1.2
DDX60-201ENST00000393743 CHSY1Q86X52 802 aa7.54□□□□□ -1.2
DDX60-201ENST00000393743 PKD2L2Q9NZM6 624 aa7.54□□□□□ -1.2
DDX60-201ENST00000393743 WDR91A4D1P6 747 aa7.54□□□□□ -1.2
DDX60-201ENST00000393743 CTSHP09668 335 aa7.54□□□□□ -1.2
DDX60-201ENST00000393743 NMT1P30419 496 aaKnown RBP7.54□□□□□ -1.2
DDX60-201ENST00000393743 NCKAP1LP55160 1127 aa7.54□□□□□ -1.2
DDX60-201ENST00000393743 INHBEP58166 350 aa7.54□□□□□ -1.2
DDX60-201ENST00000393743 PPP2R2AP63151 447 aa7.54□□□□□ -1.2
DDX60-201ENST00000393743 SF3A3Q12874 501 aaKnown RBP eCLIP7.54□□□□□ -1.2
DDX60-201ENST00000393743 PHKG1Q16816 387 aa7.54□□□□□ -1.2
DDX60-201ENST00000393743 GRAMD1BQ3KR37 738 aa7.54□□□□□ -1.2
DDX60-201ENST00000393743 ZC3H12BQ5HYM0 836 aaKnown RBP7.54□□□□□ -1.2
DDX60-201ENST00000393743 LRRC8BQ6P9F7 803 aa7.54□□□□□ -1.2
DDX60-201ENST00000393743 TMEM143Q96AN5 459 aa7.54□□□□□ -1.2
DDX60-201ENST00000393743 SKA1Q96BD8 255 aa7.54□□□□□ -1.2
DDX60-201ENST00000393743 CMTM5Q96DZ9 223 aa7.54□□□□□ -1.2
DDX60-201ENST00000393743 GMCL1Q96IK5 515 aa7.54□□□□□ -1.2
DDX60-201ENST00000393743 CPVLQ9H3G5 476 aa7.54□□□□□ -1.2
DDX60-201ENST00000393743 RUBCNLQ9H714 662 aa7.54□□□□□ -1.2
DDX60-201ENST00000393743 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.54□□□□□ -1.2
DDX60-201ENST00000393743 FAM32AQ9Y421 112 aaKnown RBP7.54□□□□□ -1.2
DDX60-201ENST00000393743 USP32Q8NFA0 1604 aa7.54□□□□□ -1.2
DDX60-201ENST00000393743 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP7.53□□□□□ -1.2
DDX60-201ENST00000393743 CCDC78A2IDD5 438 aa7.53□□□□□ -1.2
DDX60-201ENST00000393743 SPDYE5A6NIY4 337 aa7.53□□□□□ -1.2
DDX60-201ENST00000393743 CYP26A1O43174 497 aa7.53□□□□□ -1.2
DDX60-201ENST00000393743 TMEM253P0C7T8 217 aa7.53□□□□□ -1.2
DDX60-201ENST00000393743 SRGNP10124 158 aa7.53□□□□□ -1.2
DDX60-201ENST00000393743 KRT4P19013 534 aa7.53□□□□□ -1.2
DDX60-201ENST00000393743 ATICP31939 592 aa7.53□□□□□ -1.2
DDX60-201ENST00000393743 GEMP55040 296 aa7.53□□□□□ -1.2
DDX60-201ENST00000393743 KCNA1Q09470 495 aa7.53□□□□□ -1.2
DDX60-201ENST00000393743 ZNF177Q13360 481 aaPredicted RBP7.53□□□□□ -1.2
DDX60-201ENST00000393743 TP53BP2Q13625 1128 aa7.53□□□□□ -1.2
DDX60-201ENST00000393743 SPDYE7PQ495Y7 208 aa7.53□□□□□ -1.2
DDX60-201ENST00000393743 CXorf38Q8TB03 319 aa7.53□□□□□ -1.2
DDX60-201ENST00000393743 PTPRN2Q92932 1015 aa7.53□□□□□ -1.2
DDX60-201ENST00000393743 ZBTB9Q96C00 473 aa7.53□□□□□ -1.2
DDX60-201ENST00000393743 REEP2Q9BRK0 252 aa7.53□□□□□ -1.2
DDX60-201ENST00000393743 NAT9Q9BTE0 207 aa7.53□□□□□ -1.2
DDX60-201ENST00000393743 CYP3A43Q9HB55 503 aa7.53□□□□□ -1.2
DDX60-201ENST00000393743 ADGRG1Q9Y653 693 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms