RNA–Protein interactions for RNA: ENST00000390425.2

TRAV3-201, Transcript of T cell receptor alpha variable 3 (gene/pseudogene), humanhuman

APPRIS P1 BASIC

Gene TRAV3, Length 519 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV3-201ENST00000390425 ZSWIM3Q96MP5 696 aa12.02□□□□□ -0.49
TRAV3-201ENST00000390425 ASB16Q96NS5 453 aa12.02□□□□□ -0.49
TRAV3-201ENST00000390425 LRRC3Q9BY71 257 aa12.02□□□□□ -0.49
TRAV3-201ENST00000390425 OSBPL6Q9BZF3 934 aa12.02□□□□□ -0.49
TRAV3-201ENST00000390425 SEMA4AQ9H3S1 761 aa12.02□□□□□ -0.49
TRAV3-201ENST00000390425 PLEKHA5Q9HAU0 1116 aa12.02□□□□□ -0.49
TRAV3-201ENST00000390425 HEBP1Q9NRV9 189 aa12.02□□□□□ -0.49
TRAV3-201ENST00000390425 LARSQ9P2J5 1176 aaKnown RBP12.02□□□□□ -0.49
TRAV3-201ENST00000390425 UBQLN1Q9UMX0 589 aaKnown RBP12.02□□□□□ -0.49
TRAV3-201ENST00000390425 YIPF1Q9Y548 306 aa12.02□□□□□ -0.49
TRAV3-201ENST00000390425 FAM170BA6NMN3 283 aa12.01□□□□□ -0.49
TRAV3-201ENST00000390425 TISP43B9A030 160 aa12.01□□□□□ -0.49
TRAV3-201ENST00000390425 K7ENM7 598 aa12.01□□□□□ -0.49
TRAV3-201ENST00000390425 HNRNPDLO14979 420 aaKnown RBP12.01□□□□□ -0.49
TRAV3-201ENST00000390425 OGTO15294 1046 aa12.01□□□□□ -0.49
TRAV3-201ENST00000390425 SLC26A4O43511 780 aa12.01□□□□□ -0.49
TRAV3-201ENST00000390425 MICAL2O94851 1124 aa12.01□□□□□ -0.49
TRAV3-201ENST00000390425 OAZ2O95190 189 aa12.01□□□□□ -0.49
TRAV3-201ENST00000390425 PLCG1P19174 1290 aa12.01□□□□□ -0.49
TRAV3-201ENST00000390425 CYP3A5P20815 502 aa12.01□□□□□ -0.49
TRAV3-201ENST00000390425 MATR3P43243 847 aaKnown RBP eCLIP12.01□□□□□ -0.49
TRAV3-201ENST00000390425 LIG4P49917 911 aa12.01□□□□□ -0.49
TRAV3-201ENST00000390425 YWHAHQ04917 246 aaPredicted RBP12.01□□□□□ -0.49
TRAV3-201ENST00000390425 PPP2R3AQ06190 1150 aa12.01□□□□□ -0.49
TRAV3-201ENST00000390425 DHX8Q14562 1220 aaKnown RBP12.01□□□□□ -0.49
TRAV3-201ENST00000390425 MCM6Q14566 821 aa12.01□□□□□ -0.49
TRAV3-201ENST00000390425 KARSQ15046 597 aaKnown RBP12.01□□□□□ -0.49
TRAV3-201ENST00000390425 VITQ6UXI7 678 aa12.01□□□□□ -0.49
TRAV3-201ENST00000390425 TMC8Q8IU68 726 aa12.01□□□□□ -0.49
TRAV3-201ENST00000390425 SUMF1Q8NBK3 374 aa12.01□□□□□ -0.49
TRAV3-201ENST00000390425 RAD54LQ92698 747 aa12.01□□□□□ -0.49
TRAV3-201ENST00000390425 CLDN23Q96B33 292 aa12.01□□□□□ -0.49
TRAV3-201ENST00000390425 RSPRY1Q96DX4 576 aa12.01□□□□□ -0.49
TRAV3-201ENST00000390425 KIF12Q96FN5 646 aa12.01□□□□□ -0.49
TRAV3-201ENST00000390425 PGLYRP2Q96PD5 576 aa12.01□□□□□ -0.49
TRAV3-201ENST00000390425 BCO2Q9BYV7 579 aa12.01□□□□□ -0.49
TRAV3-201ENST00000390425 DNAJC25Q9H1X3 360 aa12.01□□□□□ -0.49
TRAV3-201ENST00000390425 SPATA6Q9NWH7 488 aaPredicted RBP12.01□□□□□ -0.49
TRAV3-201ENST00000390425 KCNG1Q9UIX4 513 aa12.01□□□□□ -0.49
TRAV3-201ENST00000390425 TBX20Q9UMR3 447 aa12.01□□□□□ -0.49
TRAV3-201ENST00000390425 ANAPC1Q9H1A4 1944 aa12□□□□□ -0.49
TRAV3-201ENST00000390425 RALGAPA1Q6GYQ0 2036 aa12□□□□□ -0.49
TRAV3-201ENST00000390425 ATG2BQ96BY7 2078 aa12□□□□□ -0.49
TRAV3-201ENST00000390425 A0A0B4J269 797 aa12□□□□□ -0.49
TRAV3-201ENST00000390425 ANKRD63C9JTQ0 380 aa12□□□□□ -0.49
TRAV3-201ENST00000390425 H0YCG3 227 aa12□□□□□ -0.49
TRAV3-201ENST00000390425 SPTLC1O15269 473 aa12□□□□□ -0.49
TRAV3-201ENST00000390425 FAM13AO94988 1023 aa12□□□□□ -0.49
TRAV3-201ENST00000390425 NFICP08651 508 aa12□□□□□ -0.49
TRAV3-201ENST00000390425 MYL4P12829 197 aa12□□□□□ -0.49
TRAV3-201ENST00000390425 UBA7P41226 1012 aa12□□□□□ -0.49
TRAV3-201ENST00000390425 SPATA1Q5VX52 437 aa12□□□□□ -0.49
TRAV3-201ENST00000390425 JADE1Q6IE81 842 aa12□□□□□ -0.49
TRAV3-201ENST00000390425 MAP4K3Q8IVH8 894 aa12□□□□□ -0.49
TRAV3-201ENST00000390425 TTC9BQ8N6N2 239 aa12□□□□□ -0.49
TRAV3-201ENST00000390425 SHKBP1Q8TBC3 707 aa12□□□□□ -0.49
TRAV3-201ENST00000390425 KCNG4Q8TDN1 519 aa12□□□□□ -0.49
TRAV3-201ENST00000390425 SMARCD2Q92925 531 aa12□□□□□ -0.49
TRAV3-201ENST00000390425 CALML4Q96GE6 196 aa12□□□□□ -0.49
TRAV3-201ENST00000390425 TMEM209Q96SK2 561 aa12□□□□□ -0.49
TRAV3-201ENST00000390425 IKZF4Q9H2S9 585 aa12□□□□□ -0.49
TRAV3-201ENST00000390425 PARVGQ9HBI0 331 aa12□□□□□ -0.49
TRAV3-201ENST00000390425 ZFP14Q9HCL3 533 aa12□□□□□ -0.49
TRAV3-201ENST00000390425 ASAH2Q9NR71 780 aa12□□□□□ -0.49
TRAV3-201ENST00000390425 CPSF3Q9UKF6 684 aaKnown RBP12□□□□□ -0.49
TRAV3-201ENST00000390425 FBXO4Q9UKT5 387 aa12□□□□□ -0.49
TRAV3-201ENST00000390425 MAFFQ9ULX9 164 aa12□□□□□ -0.49
TRAV3-201ENST00000390425 SMC3Q9UQE7 1217 aa12□□□□□ -0.49
TRAV3-201ENST00000390425 SPAG17Q6Q759 2223 aa12□□□□□ -0.49
TRAV3-201ENST00000390425 GREB1Q4ZG55 1949 aa11.99□□□□□ -0.49
TRAV3-201ENST00000390425 ARNTLO00327 626 aa11.99□□□□□ -0.49
TRAV3-201ENST00000390425 ZNF197O14709 1029 aa11.99□□□□□ -0.49
TRAV3-201ENST00000390425 LAMTOR5O43504 91 aa11.99□□□□□ -0.49
TRAV3-201ENST00000390425 TRAK2O60296 914 aa11.99□□□□□ -0.49
TRAV3-201ENST00000390425 MARCKSP29966 332 aaPredicted RBP11.99□□□□□ -0.49
TRAV3-201ENST00000390425 NMT1P30419 496 aaKnown RBP11.99□□□□□ -0.49
TRAV3-201ENST00000390425 VIPR2P41587 438 aa11.99□□□□□ -0.49
TRAV3-201ENST00000390425 MAGEA9P43362 315 aa11.99□□□□□ -0.49
TRAV3-201ENST00000390425 RPS9P46781 194 aaKnown RBP11.99□□□□□ -0.49
TRAV3-201ENST00000390425 LILRA4P59901 499 aa11.99□□□□□ -0.49
TRAV3-201ENST00000390425 GTF2BQ00403 316 aa11.99□□□□□ -0.49
TRAV3-201ENST00000390425 GPR17Q13304 367 aa11.99□□□□□ -0.49
TRAV3-201ENST00000390425 SF3A1Q15459 793 aaKnown RBP11.99□□□□□ -0.49
TRAV3-201ENST00000390425 TEAD2Q15562 447 aa11.99□□□□□ -0.49
TRAV3-201ENST00000390425 ZNF528Q3MIS6 628 aa11.99□□□□□ -0.49
TRAV3-201ENST00000390425 LARP1BQ659C4 914 aaKnown RBP11.99□□□□□ -0.49
TRAV3-201ENST00000390425 IQCEQ6IPM2 695 aa11.99□□□□□ -0.49
TRAV3-201ENST00000390425 ZC3H14Q6PJT7 736 aaKnown RBP11.99□□□□□ -0.49
TRAV3-201ENST00000390425 USP49Q70CQ1 688 aa11.99□□□□□ -0.49
TRAV3-201ENST00000390425 ELMOD1Q8N336 334 aa11.99□□□□□ -0.49
TRAV3-201ENST00000390425 DCLK2Q8N568 766 aa11.99□□□□□ -0.49
TRAV3-201ENST00000390425 MYCT1Q8N699 235 aa11.99□□□□□ -0.49
TRAV3-201ENST00000390425 OR10T2Q8NGX3 314 aa11.99□□□□□ -0.49
TRAV3-201ENST00000390425 LARP4BQ92615 738 aaKnown RBP11.99□□□□□ -0.49
TRAV3-201ENST00000390425 NELL1Q92832 810 aa11.99□□□□□ -0.49
TRAV3-201ENST00000390425 ZNF512Q96ME7 567 aaPredicted RBP11.99□□□□□ -0.49
TRAV3-201ENST00000390425 MKNK1Q9BUB5 465 aa11.99□□□□□ -0.49
TRAV3-201ENST00000390425 MSTO1Q9BUK6 570 aa11.99□□□□□ -0.49
TRAV3-201ENST00000390425 BRD9Q9H8M2 597 aa11.99□□□□□ -0.49
TRAV3-201ENST00000390425 RPF1Q9H9Y2 349 aaKnown RBP11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms