RNA–Protein interactions for RNA: ENST00000389629.8

RTF1-201, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTF1, Length 5,021 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-201ENST00000389629 FOXO6A8MYZ6 492 aa15□□□□□ -0.01
RTF1-201ENST00000389629 C21orf2O43822 256 aa15□□□□□ -0.01
RTF1-201ENST00000389629 ROR2Q01974 943 aaKnown RBP15□□□□□ -0.01
RTF1-201ENST00000389629 SLC34A1Q06495 639 aa15□□□□□ -0.01
RTF1-201ENST00000389629 PTK7Q13308 1070 aa15□□□□□ -0.01
RTF1-201ENST00000389629 CYLC2Q14093 348 aaPredicted RBP15□□□□□ -0.01
RTF1-201ENST00000389629 WASHC2DQ5SRD0 308 aa15□□□□□ -0.01
RTF1-201ENST00000389629 PPP1R2P3Q6NXS1 205 aa15□□□□□ -0.01
RTF1-201ENST00000389629 LRRC74BQ6ZQY2 392 aa15□□□□□ -0.01
RTF1-201ENST00000389629 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15□□□□□ -0.011e-6■■■■■ 33.1
RTF1-201ENST00000389629 SLC12A3P55017 1021 aa15□□□□□ -0.01
RTF1-201ENST00000389629 PPP6R3Q5H9R7 873 aaPredicted RBP15□□□□□ -0.01
RTF1-201ENST00000389629 RARS2Q5T160 578 aaKnown RBP15□□□□□ -0.01
RTF1-201ENST00000389629 DUPD1Q68J44 220 aa15□□□□□ -0.01
RTF1-201ENST00000389629 TRIM50Q86XT4 487 aa15□□□□□ -0.01
RTF1-201ENST00000389629 CKAP2Q8WWK9 683 aa15□□□□□ -0.01
RTF1-201ENST00000389629 ELMO3Q96BJ8 720 aa15□□□□□ -0.01
RTF1-201ENST00000389629 OPTNQ96CV9 577 aa15□□□□□ -0.01
RTF1-201ENST00000389629 HES6Q96HZ4 224 aa15□□□□□ -0.01
RTF1-201ENST00000389629 ANKRD27Q96NW4 1050 aa15□□□□□ -0.01
RTF1-201ENST00000389629 ARMCX1Q9P291 453 aa15□□□□□ -0.01
RTF1-201ENST00000389629 MMP13P45452 471 aa15□□□□□ -0.01
RTF1-201ENST00000389629 ARMC3Q5W041 872 aa15□□□□□ -0.01
RTF1-201ENST00000389629 CCNYQ8ND76 341 aa15□□□□□ -0.01
RTF1-201ENST00000389629 RBM46Q8TBY0 533 aaKnown RBP15□□□□□ -0.01
RTF1-201ENST00000389629 EFHD1Q9BUP0 239 aa15□□□□□ -0.01
RTF1-201ENST00000389629 SLCO1B3Q9NPD5 702 aa15□□□□□ -0.01
RTF1-201ENST00000389629 SLC9A2Q9UBY0 812 aa15□□□□□ -0.01
RTF1-201ENST00000389629 C11orf63Q6NUN7 778 aa14.99□□□□□ -0.01
RTF1-201ENST00000389629 IRGCQ6NXR0 463 aa14.99□□□□□ -0.01
RTF1-201ENST00000389629 ZNF720Q7Z2F6 126 aa14.99□□□□□ -0.01
RTF1-201ENST00000389629 LCA5Q86VQ0 697 aa14.99□□□□□ -0.01
RTF1-201ENST00000389629 RIBC1Q8N443 379 aaPredicted RBP14.99□□□□□ -0.01
RTF1-201ENST00000389629 MAGEC3Q8TD91 643 aa14.99□□□□□ -0.01
RTF1-201ENST00000389629 ADA2Q9NZK5 511 aa14.99□□□□□ -0.01
RTF1-201ENST00000389629 PRR12Q9ULL5 1215 aa14.99□□□□□ -0.01
RTF1-201ENST00000389629 BTNL10A8MVZ5 291 aa14.99□□□□□ -0.01
RTF1-201ENST00000389629 NKRFO15226 690 aaKnown RBP eCLIP14.99□□□□□ -0.01
RTF1-201ENST00000389629 YWHABP31946 246 aaKnown RBP14.99□□□□□ -0.01
RTF1-201ENST00000389629 ACBD5Q5T8D3 534 aaPredicted RBP14.99□□□□□ -0.01
RTF1-201ENST00000389629 MCUQ8NE86 351 aa14.99□□□□□ -0.01
RTF1-201ENST00000389629 DPPA5A6NC42 116 aa14.99□□□□□ -0.01
RTF1-201ENST00000389629 XPO1O14980 1071 aaKnown RBP14.99□□□□□ -0.01
RTF1-201ENST00000389629 ZBTB39O15060 712 aa14.99□□□□□ -0.01
RTF1-201ENST00000389629 KRT10P13645 584 aa14.99□□□□□ -0.01
RTF1-201ENST00000389629 ZNF572Q7Z3I7 529 aaPredicted RBP14.99□□□□□ -0.01
RTF1-201ENST00000389629 KCTD10Q9H3F6 313 aa14.99□□□□□ -0.01
RTF1-201ENST00000389629 NGRNQ9NPE2 291 aaKnown RBP14.99□□□□□ -0.01
RTF1-201ENST00000389629 ZBBXA8MT70 800 aa14.99□□□□□ -0.01
RTF1-201ENST00000389629 GIPC1O14908 333 aa14.99□□□□□ -0.01
RTF1-201ENST00000389629 SPOPLQ6IQ16 392 aa14.99□□□□□ -0.01
RTF1-201ENST00000389629 ACAD10Q6JQN1 1059 aa14.99□□□□□ -0.01
RTF1-201ENST00000389629 ENOSF1Q7L5Y1 443 aa14.99□□□□□ -0.01
RTF1-201ENST00000389629 SCUBE1Q8IWY4 988 aa14.99□□□□□ -0.01
RTF1-201ENST00000389629 DNAAF3Q8N9W5 541 aa14.99□□□□□ -0.01
RTF1-201ENST00000389629 PWWP2AQ96N64 755 aa14.99□□□□□ -0.01
RTF1-201ENST00000389629 ERVK-5Q9HDB9 667 aa14.99□□□□□ -0.01
RTF1-201ENST00000389629 PARVAQ9NVD7 372 aa14.99□□□□□ -0.01
RTF1-201ENST00000389629 DDX18Q9NVP1 670 aaKnown RBP14.99□□□□□ -0.01
RTF1-201ENST00000389629 NYAP2Q9P242 653 aa14.99□□□□□ -0.01
RTF1-201ENST00000389629 TNS2Q63HR2 1409 aa14.98□□□□□ -0.01
RTF1-201ENST00000389629 MCF2P10911 925 aa14.98□□□□□ -0.01
RTF1-201ENST00000389629 CYP11B1P15538 503 aa14.98□□□□□ -0.01
RTF1-201ENST00000389629 MTFR1Q15390 333 aa14.98□□□□□ -0.01
RTF1-201ENST00000389629 FSCBQ5H9T9 825 aa14.98□□□□□ -0.01
RTF1-201ENST00000389629 RNF220Q5VTB9 566 aa14.98□□□□□ -0.01
RTF1-201ENST00000389629 FAM160B2Q86V87 743 aa14.98□□□□□ -0.01
RTF1-201ENST00000389629 ARHGEF19Q8IW93 802 aa14.98□□□□□ -0.01
RTF1-201ENST00000389629 ZBTB8OSQ8IWT0 167 aa14.98□□□□□ -0.01
RTF1-201ENST00000389629 PRELID2Q8N945 189 aa14.98□□□□□ -0.01
RTF1-201ENST00000389629 PCMTD2Q9NV79 361 aa14.98□□□□□ -0.01
RTF1-201ENST00000389629 GSTT1P30711 240 aa14.98□□□□□ -0.01
RTF1-201ENST00000389629 STX3Q13277 289 aa14.98□□□□□ -0.01
RTF1-201ENST00000389629 SESTD1Q86VW0 696 aa14.98□□□□□ -0.01
RTF1-201ENST00000389629 GPD1LQ8N335 351 aa14.98□□□□□ -0.01
RTF1-201ENST00000389629 ALG3Q92685 438 aa14.98□□□□□ -0.01
RTF1-201ENST00000389629 KIFC3Q9BVG8 833 aa14.98□□□□□ -0.01
RTF1-201ENST00000389629 TMEM120AQ9BXJ8 343 aa14.98□□□□□ -0.01
RTF1-201ENST00000389629 NINJ2Q9NZG7 142 aa14.98□□□□□ -0.01
RTF1-201ENST00000389629 INPP5FQ9Y2H2 1132 aa14.98□□□□□ -0.01
RTF1-201ENST00000389629 SEC24DO94855 1032 aaPredicted RBP14.98□□□□□ -0.01
RTF1-201ENST00000389629 CALB1P05937 261 aa14.98□□□□□ -0.01
RTF1-201ENST00000389629 NUDT17P0C025 328 aa14.98□□□□□ -0.01
RTF1-201ENST00000389629 PRAMEP78395 509 aa14.98□□□□□ -0.01
RTF1-201ENST00000389629 RRP1BQ14684 758 aaKnown RBP14.98□□□□□ -0.01
RTF1-201ENST00000389629 PKN2Q16513 984 aaKnown RBP14.98□□□□□ -0.01
RTF1-201ENST00000389629 CBWD2Q8IUF1 395 aa14.98□□□□□ -0.01
RTF1-201ENST00000389629 DHX38Q92620 1227 aaKnown RBP14.98□□□□□ -0.01
RTF1-201ENST00000389629 SUGT1Q9Y2Z0 365 aa14.98□□□□□ -0.01
RTF1-201ENST00000389629 MYH8P13535 1937 aa14.98□□□□□ -0.01
RTF1-201ENST00000389629 A6NJR5 290 aa14.98□□□□□ -0.01
RTF1-201ENST00000389629 PRPSAP2O60256 369 aa14.98□□□□□ -0.01
RTF1-201ENST00000389629 KRT36O76013 467 aa14.98□□□□□ -0.01
RTF1-201ENST00000389629 GH1P01241 217 aa14.98□□□□□ -0.01
RTF1-201ENST00000389629 YARSP54577 528 aaKnown RBP14.98□□□□□ -0.01
RTF1-201ENST00000389629 GEMIN4P57678 1058 aaKnown RBP14.98□□□□□ -0.01
RTF1-201ENST00000389629 OR6B2Q6IFH4 312 aa14.98□□□□□ -0.01
RTF1-201ENST00000389629 TTC13Q8NBP0 860 aa14.98□□□□□ -0.01
RTF1-201ENST00000389629 RNF34Q969K3 372 aa14.98□□□□□ -0.01
RTF1-201ENST00000389629 MPHOSPH6Q99547 160 aaKnown RBP14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms