RNA–Protein interactions for RNA: ENST00000388996.9

KCNQ3-201, Transcript of potassium voltage-gated channel subfamily Q member 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene KCNQ3, Length 11,510 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ3-201ENST00000388996 SCFD2Q8WU76 684 aa12.91□□□□□ -0.34
KCNQ3-201ENST00000388996 TBX3O15119 743 aa12.91□□□□□ -0.34
KCNQ3-201ENST00000388996 EIF3DO15371 548 aaKnown RBP eCLIP12.91□□□□□ -0.34
KCNQ3-201ENST00000388996 SCARF1Q14162 830 aa12.91□□□□□ -0.34
KCNQ3-201ENST00000388996 SLC30A5Q8TAD4 765 aa12.91□□□□□ -0.34
KCNQ3-201ENST00000388996 PTPRN2Q92932 1015 aa12.91□□□□□ -0.34
KCNQ3-201ENST00000388996 OTULINQ96BN8 352 aa12.91□□□□□ -0.34
KCNQ3-201ENST00000388996 PHF20Q9BVI0 1012 aa12.91□□□□□ -0.34
KCNQ3-201ENST00000388996 AGAP1Q9UPQ3 857 aa12.91□□□□□ -0.34
KCNQ3-201ENST00000388996 KCNQ2O43526 872 aa12.91□□□□□ -0.34
KCNQ3-201ENST00000388996 MAGEA9P43362 315 aa12.91□□□□□ -0.34
KCNQ3-201ENST00000388996 GUCY1A3Q02108 690 aa12.91□□□□□ -0.34
KCNQ3-201ENST00000388996 DGKDQ16760 1214 aa12.91□□□□□ -0.34
KCNQ3-201ENST00000388996 C6orf10Q5SRN2 563 aa12.91□□□□□ -0.34
KCNQ3-201ENST00000388996 MTHFD1LQ6UB35 978 aa12.91□□□□□ -0.34
KCNQ3-201ENST00000388996 KDELC2Q7Z4H8 507 aa12.91□□□□□ -0.34
KCNQ3-201ENST00000388996 KCNV2Q8TDN2 545 aa12.91□□□□□ -0.34
KCNQ3-201ENST00000388996 SLC7A5P2Q9GIP4 190 aa12.91□□□□□ -0.34
KCNQ3-201ENST00000388996 NSMCE4AQ9NXX6 385 aa12.91□□□□□ -0.34
KCNQ3-201ENST00000388996 PTPRMP28827 1452 aa12.91□□□□□ -0.34
KCNQ3-201ENST00000388996 A0A0G2JLW4 131 aa12.9□□□□□ -0.34
KCNQ3-201ENST00000388996 NDUFS3O75489 264 aa12.9□□□□□ -0.34
KCNQ3-201ENST00000388996 RARBP10826 455 aa12.9□□□□□ -0.34
KCNQ3-201ENST00000388996 SERPINB4P48594 390 aa12.9□□□□□ -0.34
KCNQ3-201ENST00000388996 GRAMD4Q6IC98 578 aa12.9□□□□□ -0.34
KCNQ3-201ENST00000388996 RGS7P49802 495 aa12.9□□□□□ -0.34
KCNQ3-201ENST00000388996 GYS2P54840 703 aa12.9□□□□□ -0.34
KCNQ3-201ENST00000388996 CUL3Q13618 768 aa12.9□□□□□ -0.34
KCNQ3-201ENST00000388996 CLEC10AQ8IUN9 316 aa12.9□□□□□ -0.34
KCNQ3-201ENST00000388996 SPATA18Q8TC71 538 aa12.9□□□□□ -0.34
KCNQ3-201ENST00000388996 LBHD1Q9BQE6 289 aaPredicted RBP12.9□□□□□ -0.34
KCNQ3-201ENST00000388996 ERAP1Q9NZ08 941 aa12.9□□□□□ -0.34
KCNQ3-201ENST00000388996 SYNDIG1LA6NDD5 238 aa12.9□□□□□ -0.34
KCNQ3-201ENST00000388996 POLRMTO00411 1230 aaKnown RBP12.9□□□□□ -0.34
KCNQ3-201ENST00000388996 KRT4P19013 534 aa12.9□□□□□ -0.34
KCNQ3-201ENST00000388996 ACOT2P49753 483 aa12.9□□□□□ -0.34
KCNQ3-201ENST00000388996 CATSPER3Q86XQ3 398 aa12.9□□□□□ -0.34
KCNQ3-201ENST00000388996 STX19Q8N4C7 294 aa12.9□□□□□ -0.34
KCNQ3-201ENST00000388996 RBBP8NLQ8NC74 664 aaPredicted RBP12.9□□□□□ -0.34
KCNQ3-201ENST00000388996 NT5C1AQ9BXI3 368 aa12.9□□□□□ -0.34
KCNQ3-201ENST00000388996 DPYDQ12882 1025 aa12.9□□□□□ -0.34
KCNQ3-201ENST00000388996 VPS72Q15906 364 aa12.9□□□□□ -0.34
KCNQ3-201ENST00000388996 SV2CQ496J9 727 aa12.9□□□□□ -0.34
KCNQ3-201ENST00000388996 PSMD3O43242 534 aa12.9□□□□□ -0.34
KCNQ3-201ENST00000388996 HMOX2P30519 316 aa12.9□□□□□ -0.34
KCNQ3-201ENST00000388996 NUP93Q8N1F7 819 aa12.9□□□□□ -0.34
KCNQ3-201ENST00000388996 SMG5Q9UPR3 1016 aaKnown RBP12.9□□□□□ -0.34
KCNQ3-201ENST00000388996 AURKCQ9UQB9 309 aa12.9□□□□□ -0.34
KCNQ3-201ENST00000388996 EEF2KO00418 725 aaKnown RBP12.9□□□□□ -0.34
KCNQ3-201ENST00000388996 SPDYAQ5MJ70 313 aa12.9□□□□□ -0.34
KCNQ3-201ENST00000388996 PPP1R36Q96LQ0 422 aa12.9□□□□□ -0.34
KCNQ3-201ENST00000388996 TMEM106CQ9BVX2 250 aa12.9□□□□□ -0.34
KCNQ3-201ENST00000388996 SNX12Q9UMY4 172 aa12.9□□□□□ -0.34
KCNQ3-201ENST00000388996 ATMINO43313 823 aaPredicted RBP12.9□□□□□ -0.34
KCNQ3-201ENST00000388996 BAATQ14032 418 aaPredicted RBP12.9□□□□□ -0.34
KCNQ3-201ENST00000388996 HPS3Q969F9 1004 aa12.9□□□□□ -0.34
KCNQ3-201ENST00000388996 TMEM39BQ9GZU3 492 aa12.9□□□□□ -0.34
KCNQ3-201ENST00000388996 TRAF3IP3Q9Y228 551 aa12.9□□□□□ -0.34
KCNQ3-201ENST00000388996 NWD1Q149M9 1564 aa12.9□□□□□ -0.34
KCNQ3-201ENST00000388996 ELMO2Q96JJ3 720 aa12.9□□□□□ -0.35
KCNQ3-201ENST00000388996 MRPL1Q9BYD6 325 aaKnown RBP12.9□□□□□ -0.35
KCNQ3-201ENST00000388996 ALG13Q9NP73 1137 aaKnown RBP12.9□□□□□ -0.35
KCNQ3-201ENST00000388996 EXTL3O43909 919 aa12.89□□□□□ -0.35
KCNQ3-201ENST00000388996 SNRPFP62306 86 aaKnown RBP12.89□□□□□ -0.35
KCNQ3-201ENST00000388996 STYK1Q6J9G0 422 aa12.89□□□□□ -0.35
KCNQ3-201ENST00000388996 AARS2Q5JTZ9 985 aaKnown RBP12.89□□□□□ -0.35
KCNQ3-201ENST00000388996 PID1Q7Z2X4 250 aa12.89□□□□□ -0.35
KCNQ3-201ENST00000388996 NIF3L1Q9GZT8 377 aa12.89□□□□□ -0.35
KCNQ3-201ENST00000388996 CATSPERBQ9H7T0 1116 aa12.89□□□□□ -0.35
KCNQ3-201ENST00000388996 XPO7Q9UIA9 1087 aaKnown RBP12.89□□□□□ -0.35
KCNQ3-201ENST00000388996 CDYLQ9Y232 598 aa12.89□□□□□ -0.35
KCNQ3-201ENST00000388996 SH3BP1Q9Y3L3 701 aa12.89□□□□□ -0.35
KCNQ3-201ENST00000388996 PNPLA6Q8IY17 1366 aa12.89□□□□□ -0.35
KCNQ3-201ENST00000388996 ACADSBP45954 432 aa12.89□□□□□ -0.35
KCNQ3-201ENST00000388996 PLA2G4FQ68DD2 849 aa12.89□□□□□ -0.35
KCNQ3-201ENST00000388996 OLFM3Q96PB7 478 aa12.89□□□□□ -0.35
KCNQ3-201ENST00000388996 PDGFRBP09619 1106 aa12.89□□□□□ -0.35
KCNQ3-201ENST00000388996 ST8SIA6P61647 398 aa12.89□□□□□ -0.35
KCNQ3-201ENST00000388996 TRADDQ15628 312 aa12.89□□□□□ -0.35
KCNQ3-201ENST00000388996 ZNF507Q8TCN5 953 aa12.89□□□□□ -0.35
KCNQ3-201ENST00000388996 VPS9D1Q9Y2B5 631 aa12.89□□□□□ -0.35
KCNQ3-201ENST00000388996 FAM205CA6NFA0 338 aa12.89□□□□□ -0.35
KCNQ3-201ENST00000388996 PSMD14O00487 310 aa12.89□□□□□ -0.35
KCNQ3-201ENST00000388996 CDH2P19022 906 aaPredicted RBP12.89□□□□□ -0.35
KCNQ3-201ENST00000388996 PDAP1Q13442 181 aaKnown RBP12.89□□□□□ -0.35
KCNQ3-201ENST00000388996 GOLGA7BQ2TAP0 167 aa12.89□□□□□ -0.35
KCNQ3-201ENST00000388996 LINC00116Q8NCU8 138 aa12.89□□□□□ -0.35
KCNQ3-201ENST00000388996 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.89□□□□□ -0.35
KCNQ3-201ENST00000388996 CPT1AP50416 773 aa12.89□□□□□ -0.35
KCNQ3-201ENST00000388996 CCDC144BQ3MJ40 725 aa12.89□□□□□ -0.35
KCNQ3-201ENST00000388996 CALML6Q8TD86 181 aa12.89□□□□□ -0.35
KCNQ3-201ENST00000388996 ZNF512BQ96KM6 892 aaPredicted RBP12.89□□□□□ -0.35
KCNQ3-201ENST00000388996 RAP1GDS1P52306 607 aa12.89□□□□□ -0.35
KCNQ3-201ENST00000388996 SLC18A3Q16572 532 aa12.89□□□□□ -0.35
KCNQ3-201ENST00000388996 RABL6Q3YEC7 729 aaPredicted RBP12.89□□□□□ -0.35
KCNQ3-201ENST00000388996 HPDLQ96IR7 371 aa12.89□□□□□ -0.35
KCNQ3-201ENST00000388996 TMEM117Q9H0C3 514 aa12.89□□□□□ -0.35
KCNQ3-201ENST00000388996 AMACRQ9UHK6 382 aa12.89□□□□□ -0.35
KCNQ3-201ENST00000388996 ODC1P11926 461 aa12.89□□□□□ -0.35
KCNQ3-201ENST00000388996 DMC1Q14565 340 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms