RNA–Protein interactions for RNA: ENST00000384706.1

SNORD28-201, Transcript of small nucleolar RNA, C/D box 28, humanhuman

BASIC

Gene SNORD28, Length 75 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28-201ENST00000384706 ARHGAP25P42331 645 aa0.83□□□□□ -2.28
SNORD28-201ENST00000384706 HNRNPMP52272 730 aaKnown RBP eCLIP0.83□□□□□ -2.28
SNORD28-201ENST00000384706 NXPH1P58417 271 aa0.83□□□□□ -2.28
SNORD28-201ENST00000384706 ITIH3Q06033 890 aa0.83□□□□□ -2.28
SNORD28-201ENST00000384706 SLFN5Q08AF3 891 aa0.83□□□□□ -2.28
SNORD28-201ENST00000384706 ZNF844Q08AG5 666 aa0.83□□□□□ -2.28
SNORD28-201ENST00000384706 SQSTM1Q13501 440 aa0.83□□□□□ -2.28
SNORD28-201ENST00000384706 DYRK1AQ13627 763 aa0.83□□□□□ -2.28
SNORD28-201ENST00000384706 LAMB3Q13751 1172 aa0.83□□□□□ -2.28
SNORD28-201ENST00000384706 PDCD1Q15116 288 aa0.83□□□□□ -2.28
SNORD28-201ENST00000384706 TXNRD1Q16881 649 aa0.83□□□□□ -2.28
SNORD28-201ENST00000384706 CPEB4Q17RY0 729 aaKnown RBP eCLIP0.83□□□□□ -2.28
SNORD28-201ENST00000384706 MIDNQ504T8 468 aa0.83□□□□□ -2.28
SNORD28-201ENST00000384706 MUM1L1Q5H9M0 696 aa0.83□□□□□ -2.28
SNORD28-201ENST00000384706 UTP14CQ5TAP6 766 aaKnown RBP0.83□□□□□ -2.28
SNORD28-201ENST00000384706 PXDC1Q5TGL8 231 aa0.83□□□□□ -2.28
SNORD28-201ENST00000384706 PRAMEF17Q5VTA0 474 aa0.83□□□□□ -2.28
SNORD28-201ENST00000384706 OTUD7BQ6GQQ9 843 aa0.83□□□□□ -2.28
SNORD28-201ENST00000384706 KIAA1161Q6NSJ0 714 aa0.83□□□□□ -2.28
SNORD28-201ENST00000384706 USP43Q70EL4 1123 aa0.83□□□□□ -2.28
SNORD28-201ENST00000384706 FKBP9P1Q75LS8 142 aa0.83□□□□□ -2.28
SNORD28-201ENST00000384706 IRF2BP2Q7Z5L9 587 aa0.83□□□□□ -2.28
SNORD28-201ENST00000384706 LRRTM3Q86VH5 581 aa0.83□□□□□ -2.28
SNORD28-201ENST00000384706 RASSF3Q86WH2 238 aa0.83□□□□□ -2.28
SNORD28-201ENST00000384706 SYNPOQ8N3V7 929 aa0.83□□□□□ -2.28
SNORD28-201ENST00000384706 NANOGP1Q8N7R0 232 aa0.83□□□□□ -2.28
SNORD28-201ENST00000384706 FANCBQ8NB91 859 aa0.83□□□□□ -2.28
SNORD28-201ENST00000384706 ACRBPQ8NEB7 543 aa0.83□□□□□ -2.28
SNORD28-201ENST00000384706 OR2W6PQ8NHA6 318 aa0.83□□□□□ -2.28
SNORD28-201ENST00000384706 PRSS3P2Q8NHM4 247 aa0.83□□□□□ -2.28
SNORD28-201ENST00000384706 TGFBRAP1Q8WUH2 860 aa0.83□□□□□ -2.28
SNORD28-201ENST00000384706 NSMCE1Q8WV22 266 aa0.83□□□□□ -2.28
SNORD28-201ENST00000384706 CASKIN2Q8WXE0 1202 aa0.83□□□□□ -2.28
SNORD28-201ENST00000384706 SNX19Q92543 992 aa0.83□□□□□ -2.28
SNORD28-201ENST00000384706 SLC5A5Q92911 643 aa0.83□□□□□ -2.28
SNORD28-201ENST00000384706 FATE1Q969F0 183 aa0.83□□□□□ -2.28
SNORD28-201ENST00000384706 MKL1Q969V6 931 aa0.83□□□□□ -2.28
SNORD28-201ENST00000384706 TLR10Q9BXR5 811 aa0.83□□□□□ -2.28
SNORD28-201ENST00000384706 TPSD1Q9BZJ3 242 aa0.83□□□□□ -2.28
SNORD28-201ENST00000384706 SEMA4CQ9C0C4 833 aa0.83□□□□□ -2.28
SNORD28-201ENST00000384706 VPS16Q9H269 839 aa0.83□□□□□ -2.28
SNORD28-201ENST00000384706 KANSL2Q9H9L4 492 aa0.83□□□□□ -2.28
SNORD28-201ENST00000384706 EMC7Q9NPA0 242 aa0.83□□□□□ -2.28
SNORD28-201ENST00000384706 DMRT3Q9NQL9 472 aa0.83□□□□□ -2.28
SNORD28-201ENST00000384706 TOPORSQ9NS56 1045 aaPredicted RBP0.83□□□□□ -2.28
SNORD28-201ENST00000384706 KLC4Q9NSK0 619 aa0.83□□□□□ -2.28
SNORD28-201ENST00000384706 RBM12Q9NTZ6 932 aaKnown RBP0.83□□□□□ -2.28
SNORD28-201ENST00000384706 TUBA8Q9NY65 449 aaPredicted RBP0.83□□□□□ -2.28
SNORD28-201ENST00000384706 VSX1Q9NZR4 365 aaPredicted RBP0.83□□□□□ -2.28
SNORD28-201ENST00000384706 FAM30AQ9NZY2 134 aa0.83□□□□□ -2.28
SNORD28-201ENST00000384706 DKK3Q9UBP4 350 aa0.83□□□□□ -2.28
SNORD28-201ENST00000384706 SERGEFQ9UGK8 458 aa0.83□□□□□ -2.28
SNORD28-201ENST00000384706 ZNF112Q9UJU3 913 aa0.83□□□□□ -2.28
SNORD28-201ENST00000384706 ZBTB21Q9ULJ3 1066 aa0.83□□□□□ -2.28
SNORD28-201ENST00000384706 CDYLQ9Y232 598 aa0.83□□□□□ -2.28
SNORD28-201ENST00000384706 PCDHB1Q9Y5F3 818 aa0.83□□□□□ -2.28
SNORD28-201ENST00000384706 MYBBP1AQ9BQG0 1328 aaKnown RBP0.83□□□□□ -2.28
SNORD28-201ENST00000384706 CYP2D7A0A087X1C5 515 aa0.82□□□□□ -2.28
SNORD28-201ENST00000384706 CCDC195A0A1B0GUA6 201 aa0.82□□□□□ -2.28
SNORD28-201ENST00000384706 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP0.82□□□□□ -2.28
SNORD28-201ENST00000384706 GOLGA8AA7E2F4 631 aa0.82□□□□□ -2.28
SNORD28-201ENST00000384706 KRTAP9-6A8MVA2 160 aa0.82□□□□□ -2.28
SNORD28-201ENST00000384706 ERVV-2B6SEH9 535 aa0.82□□□□□ -2.28
SNORD28-201ENST00000384706 TISP43B9A030 160 aa0.82□□□□□ -2.28
SNORD28-201ENST00000384706 GPR32O75388 356 aa0.82□□□□□ -2.28
SNORD28-201ENST00000384706 RFPL3O75679 317 aa0.82□□□□□ -2.28
SNORD28-201ENST00000384706 DNAJB5O75953 348 aa0.82□□□□□ -2.28
SNORD28-201ENST00000384706 JTBO76095 146 aa0.82□□□□□ -2.28
SNORD28-201ENST00000384706 SUN1O94901 812 aa0.82□□□□□ -2.28
SNORD28-201ENST00000384706 AGFG2O95081 481 aa0.82□□□□□ -2.28
SNORD28-201ENST00000384706 ZFXP17010 805 aaPredicted RBP0.82□□□□□ -2.28
SNORD28-201ENST00000384706 POU3F2P20265 443 aaPredicted RBP0.82□□□□□ -2.28
SNORD28-201ENST00000384706 DDCP20711 480 aa0.82□□□□□ -2.28
SNORD28-201ENST00000384706 DRD4P21917 467 aa0.82□□□□□ -2.28
SNORD28-201ENST00000384706 SCP2P22307 547 aa0.82□□□□□ -2.28
SNORD28-201ENST00000384706 ENPP1P22413 925 aa0.82□□□□□ -2.28
SNORD28-201ENST00000384706 GUCY1A2P33402 732 aa0.82□□□□□ -2.28
SNORD28-201ENST00000384706 ADCYAP1R1P41586 468 aa0.82□□□□□ -2.28
SNORD28-201ENST00000384706 LSSP48449 732 aa0.82□□□□□ -2.28
SNORD28-201ENST00000384706 KCNJ5P48544 419 aa0.82□□□□□ -2.28
SNORD28-201ENST00000384706 ALDH9A1P49189 494 aa0.82□□□□□ -2.28
SNORD28-201ENST00000384706 ANXA11P50995 505 aaKnown RBP0.82□□□□□ -2.28
SNORD28-201ENST00000384706 LINC00205P59089 165 aa0.82□□□□□ -2.28
SNORD28-201ENST00000384706 MC2RQ01718 297 aa0.82□□□□□ -2.28
SNORD28-201ENST00000384706 PPP3CAQ08209 521 aa0.82□□□□□ -2.28
SNORD28-201ENST00000384706 HYAL1Q12794 435 aa0.82□□□□□ -2.28
SNORD28-201ENST00000384706 BMPR2Q13873 1038 aa0.82□□□□□ -2.28
SNORD28-201ENST00000384706 BMS1Q14692 1282 aaKnown RBP0.82□□□□□ -2.28
SNORD28-201ENST00000384706 SEPT2Q15019 361 aa0.82□□□□□ -2.28
SNORD28-201ENST00000384706 TRIP6Q15654 476 aaKnown RBP0.82□□□□□ -2.28
SNORD28-201ENST00000384706 TBCCQ15814 346 aa0.82□□□□□ -2.28
SNORD28-201ENST00000384706 SEPT7Q16181 437 aaKnown RBP0.82□□□□□ -2.28
SNORD28-201ENST00000384706 ADRM1Q16186 407 aa0.82□□□□□ -2.28
SNORD28-201ENST00000384706 FSCN1Q16658 493 aaKnown RBP0.82□□□□□ -2.28
SNORD28-201ENST00000384706 ATP2B3Q16720 1220 aa0.82□□□□□ -2.28
SNORD28-201ENST00000384706 PROSER3Q2NL68 480 aa0.82□□□□□ -2.28
SNORD28-201ENST00000384706 ATP13A4Q4VNC1 1196 aa0.82□□□□□ -2.28
SNORD28-201ENST00000384706 PLAC9Q5JTB6 97 aa0.82□□□□□ -2.28
SNORD28-201ENST00000384706 PCID2Q5JVF3 399 aa0.82□□□□□ -2.28
SNORD28-201ENST00000384706 SOGA3Q5TF21 947 aa0.82□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms