RNA–Protein interactions for RNA: ENST00000381342.6

SNRPB-201, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SNRPB, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-201ENST00000381342 PPFIBP1Q86W92 1011 aa17.46■□□□□ 0.39
SNRPB-201ENST00000381342 CACTINQ8WUQ7 758 aaKnown RBP17.46■□□□□ 0.39
SNRPB-201ENST00000381342 CLEC1BQ9P126 229 aa17.46■□□□□ 0.39
SNRPB-201ENST00000381342 BICDL2A1A5D9 508 aa17.45■□□□□ 0.38
SNRPB-201ENST00000381342 GLP2RO95838 553 aa17.45■□□□□ 0.38
SNRPB-201ENST00000381342 PTMSP20962 102 aa17.45■□□□□ 0.38
SNRPB-201ENST00000381342 TKTP29401 623 aaKnown RBP17.45■□□□□ 0.38
SNRPB-201ENST00000381342 PSMC2P35998 433 aaKnown RBP17.45■□□□□ 0.38
SNRPB-201ENST00000381342 FKBP3Q00688 224 aaKnown RBP17.45■□□□□ 0.38
SNRPB-201ENST00000381342 ELAVL2Q12926 359 aaKnown RBP17.45■□□□□ 0.38
SNRPB-201ENST00000381342 USP41Q3LFD5 358 aa17.45■□□□□ 0.38
SNRPB-201ENST00000381342 RTP2Q5QGT7 225 aa17.45■□□□□ 0.38
SNRPB-201ENST00000381342 FAM171A1Q5VUB5 890 aa17.45■□□□□ 0.38
SNRPB-201ENST00000381342 KIAA1841Q6NSI8 718 aa17.45■□□□□ 0.38
SNRPB-201ENST00000381342 CES5AQ6NT32 575 aa17.45■□□□□ 0.38
SNRPB-201ENST00000381342 ANKRD54Q6NXT1 300 aa17.45■□□□□ 0.38
SNRPB-201ENST00000381342 TMEM184AQ6ZMB5 413 aa17.45■□□□□ 0.38
SNRPB-201ENST00000381342 CEP57Q86XR8 500 aa17.45■□□□□ 0.38
SNRPB-201ENST00000381342 MLKLQ8NB16 471 aa17.45■□□□□ 0.38
SNRPB-201ENST00000381342 SMRP1Q8NCR6 262 aa17.45■□□□□ 0.38
SNRPB-201ENST00000381342 PARD3BQ8TEW8 1205 aa17.45■□□□□ 0.38
SNRPB-201ENST00000381342 MRPL17Q9NRX2 175 aaKnown RBP17.45■□□□□ 0.38
SNRPB-201ENST00000381342 SIX4Q9UIU6 781 aa17.45■□□□□ 0.38
SNRPB-201ENST00000381342 ITGA11Q9UKX5 1188 aa17.45■□□□□ 0.38
SNRPB-201ENST00000381342 PIRO00625 290 aa17.44■□□□□ 0.38
SNRPB-201ENST00000381342 MAPK13O15264 365 aa17.44■□□□□ 0.38
SNRPB-201ENST00000381342 SPTLC1O15269 473 aa17.44■□□□□ 0.38
SNRPB-201ENST00000381342 SLC16A3O15427 465 aaKnown RBP17.44■□□□□ 0.38
SNRPB-201ENST00000381342 KRT19P08727 400 aa17.44■□□□□ 0.38
SNRPB-201ENST00000381342 TRIM49P0CI25 452 aa17.44■□□□□ 0.38
SNRPB-201ENST00000381342 TRIM49CP0CI26 452 aa17.44■□□□□ 0.38
SNRPB-201ENST00000381342 EPB41P11171 864 aaKnown RBP17.44■□□□□ 0.38
SNRPB-201ENST00000381342 ALADP13716 330 aa17.44■□□□□ 0.38
SNRPB-201ENST00000381342 BFSP1Q12934 665 aa17.44■□□□□ 0.38
SNRPB-201ENST00000381342 DUOXA2Q1HG44 320 aa17.44■□□□□ 0.38
SNRPB-201ENST00000381342 KLHL40Q2TBA0 621 aa17.44■□□□□ 0.38
SNRPB-201ENST00000381342 ELMSAN1Q6PJG2 1045 aa17.44■□□□□ 0.38
SNRPB-201ENST00000381342 PRSS55Q6UWB4 352 aaPredicted RBP17.44■□□□□ 0.38
SNRPB-201ENST00000381342 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.44■□□□□ 0.38
SNRPB-201ENST00000381342 CXorf38Q8TB03 319 aa17.44■□□□□ 0.38
SNRPB-201ENST00000381342 TMC2Q8TDI7 906 aa17.44■□□□□ 0.38
SNRPB-201ENST00000381342 RIN2Q8WYP3 895 aaPredicted RBP17.44■□□□□ 0.38
SNRPB-201ENST00000381342 ZNF516Q92618 1163 aa17.44■□□□□ 0.38
SNRPB-201ENST00000381342 SUSD3Q96L08 255 aa17.44■□□□□ 0.38
SNRPB-201ENST00000381342 MKNK1Q9BUB5 465 aa17.44■□□□□ 0.38
SNRPB-201ENST00000381342 CHST7Q9NS84 486 aa17.44■□□□□ 0.38
SNRPB-201ENST00000381342 AGAP1Q9UPQ3 857 aa17.44■□□□□ 0.38
SNRPB-201ENST00000381342 IRAK3Q9Y616 596 aa17.44■□□□□ 0.38
SNRPB-201ENST00000381342 TRAPPC3O43617 180 aa17.43■□□□□ 0.38
SNRPB-201ENST00000381342 CLASP2O75122 1294 aaKnown RBP17.43■□□□□ 0.38
SNRPB-201ENST00000381342 KRT13P13646 458 aa17.43■□□□□ 0.38
SNRPB-201ENST00000381342 FGFR3P22607 806 aa17.43■□□□□ 0.38
SNRPB-201ENST00000381342 KLRC2P26717 231 aa17.43■□□□□ 0.38
SNRPB-201ENST00000381342 AARSP49588 968 aaKnown RBP eCLIP17.43■□□□□ 0.38
SNRPB-201ENST00000381342 VAMP7P51809 220 aa17.43■□□□□ 0.38
SNRPB-201ENST00000381342 LILRA4P59901 499 aa17.43■□□□□ 0.38
SNRPB-201ENST00000381342 DSG1Q02413 1049 aa17.43■□□□□ 0.38
SNRPB-201ENST00000381342 ZP2Q05996 745 aa17.43■□□□□ 0.38
SNRPB-201ENST00000381342 C1orf220Q5T0J3 134 aa17.43■□□□□ 0.38
SNRPB-201ENST00000381342 KIAA0319Q5VV43 1072 aa17.43■□□□□ 0.38
SNRPB-201ENST00000381342 INTS8Q75QN2 995 aaKnown RBP17.43■□□□□ 0.38
SNRPB-201ENST00000381342 TRAPPC11Q7Z392 1133 aa17.43■□□□□ 0.38
SNRPB-201ENST00000381342 CSGALNACT2Q8N6G5 542 aa17.43■□□□□ 0.38
SNRPB-201ENST00000381342 SYAP1Q96A49 352 aaPredicted RBP17.43■□□□□ 0.38
SNRPB-201ENST00000381342 ZNF560Q96MR9 790 aa17.43■□□□□ 0.38
SNRPB-201ENST00000381342 CEP63Q96MT8 703 aa17.43■□□□□ 0.38
SNRPB-201ENST00000381342 MED15Q96RN5 788 aa17.43■□□□□ 0.38
SNRPB-201ENST00000381342 TTPALQ9BTX7 342 aa17.43■□□□□ 0.38
SNRPB-201ENST00000381342 DZANK1Q9NVP4 752 aa17.43■□□□□ 0.38
SNRPB-201ENST00000381342 RWDD2AQ9UIY3 292 aa17.43■□□□□ 0.38
SNRPB-201ENST00000381342 USP15Q9Y4E8 981 aaPredicted RBP17.43■□□□□ 0.38
SNRPB-201ENST00000381342 HCFC2Q9Y5Z7 792 aa17.43■□□□□ 0.38
SNRPB-201ENST00000381342 TTC28Q96AY4 2481 aa17.43■□□□□ 0.38
SNRPB-201ENST00000381342 RPL17P18621 184 aaKnown RBP17.42■□□□□ 0.38
SNRPB-201ENST00000381342 TAF6P49848 677 aa17.42■□□□□ 0.38
SNRPB-201ENST00000381342 CLDN10P78369 228 aa17.42■□□□□ 0.38
SNRPB-201ENST00000381342 SV2CQ496J9 727 aa17.42■□□□□ 0.38
SNRPB-201ENST00000381342 TDRD10Q5VZ19 366 aaKnown RBP17.42■□□□□ 0.38
SNRPB-201ENST00000381342 FOXR2Q6PJQ5 311 aa17.42■□□□□ 0.38
SNRPB-201ENST00000381342 SASS6Q6UVJ0 657 aa17.42■□□□□ 0.38
SNRPB-201ENST00000381342 DSTYKQ6XUX3 929 aa17.42■□□□□ 0.38
SNRPB-201ENST00000381342 BORCS6Q96GS4 357 aa17.42■□□□□ 0.38
SNRPB-201ENST00000381342 PHF7Q9BWX1 381 aaPredicted RBP17.42■□□□□ 0.38
SNRPB-201ENST00000381342 DPP7Q9UHL4 492 aa17.42■□□□□ 0.38
SNRPB-201ENST00000381342 DACH1Q9UI36 760 aa17.42■□□□□ 0.38
SNRPB-201ENST00000381342 PCDHB8Q9UN66 801 aa17.42■□□□□ 0.38
SNRPB-201ENST00000381342 M0QZQ0 153 aa17.41■□□□□ 0.38
SNRPB-201ENST00000381342 LILRB3O75022 631 aa17.41■□□□□ 0.38
SNRPB-201ENST00000381342 CNPP09543 421 aaKnown RBP17.41■□□□□ 0.38
SNRPB-201ENST00000381342 RBP5P82980 135 aa17.41■□□□□ 0.38
SNRPB-201ENST00000381342 RBM10P98175 930 aaKnown RBP17.41■□□□□ 0.38
SNRPB-201ENST00000381342 ITIH3Q06033 890 aa17.41■□□□□ 0.38
SNRPB-201ENST00000381342 BIRC3Q13489 604 aa17.41■□□□□ 0.38
SNRPB-201ENST00000381342 PSMD5Q16401 504 aa17.41■□□□□ 0.38
SNRPB-201ENST00000381342 STX1AQ16623 288 aa17.41■□□□□ 0.38
SNRPB-201ENST00000381342 CCDC40Q4G0X9 1142 aa17.41■□□□□ 0.38
SNRPB-201ENST00000381342 DCAF17Q5H9S7 520 aaPredicted RBP17.41■□□□□ 0.38
SNRPB-201ENST00000381342 USP37Q86T82 979 aa17.41■□□□□ 0.38
SNRPB-201ENST00000381342 GLYCTKQ8IVS8 523 aa17.41■□□□□ 0.38
SNRPB-201ENST00000381342 LRRC52Q8N7C0 313 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms