RNA–Protein interactions for RNA: ENST00000381272.5

SMC6-202, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 5

Gene SMC6, Length 1,803 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-202ENST00000381272 CNOT11Q9UKZ1 510 aaKnown RBP4.17□□□□□ -1.74
SMC6-202ENST00000381272 PCDHA9Q9Y5H5 950 aa4.17□□□□□ -1.74
SMC6-202ENST00000381272 SRPRBQ9Y5M8 271 aaKnown RBP4.17□□□□□ -1.74
SMC6-202ENST00000381272 CASZ1Q86V15 1759 aa4.17□□□□□ -1.74
SMC6-202ENST00000381272 NID2Q14112 1375 aa4.17□□□□□ -1.74
SMC6-202ENST00000381272 RTL9Q8NET4 1388 aa4.17□□□□□ -1.74
SMC6-202ENST00000381272 COL14A1Q05707 1796 aaKnown RBP4.17□□□□□ -1.74
SMC6-202ENST00000381272 BAZ2BQ9UIF8 2168 aaKnown RBP4.17□□□□□ -1.74
SMC6-202ENST00000381272 PLCH1Q4KWH8 1693 aa4.16□□□□□ -1.74
SMC6-202ENST00000381272 CCDC163A0A0D9SF12 145 aa4.16□□□□□ -1.74
SMC6-202ENST00000381272 CCDC196A0A1B0GTZ2 297 aa4.16□□□□□ -1.74
SMC6-202ENST00000381272 TRIM75PA6NK02 468 aa4.16□□□□□ -1.74
SMC6-202ENST00000381272 ADAMTS3O15072 1205 aa4.16□□□□□ -1.74
SMC6-202ENST00000381272 TEX33O43247 280 aa4.16□□□□□ -1.74
SMC6-202ENST00000381272 NMT2O60551 498 aa4.16□□□□□ -1.74
SMC6-202ENST00000381272 EFCAB14O75071 495 aa4.16□□□□□ -1.74
SMC6-202ENST00000381272 FBXO21O94952 628 aa4.16□□□□□ -1.74
SMC6-202ENST00000381272 CRTAMO95727 393 aa4.16□□□□□ -1.74
SMC6-202ENST00000381272 CKMP06732 381 aa4.16□□□□□ -1.74
SMC6-202ENST00000381272 SRGAP2CP0DJJ0 459 aa4.16□□□□□ -1.74
SMC6-202ENST00000381272 KLRK1P26718 216 aa4.16□□□□□ -1.74
SMC6-202ENST00000381272 KRT2P35908 639 aa4.16□□□□□ -1.74
SMC6-202ENST00000381272 PLCD1P51178 756 aa4.16□□□□□ -1.74
SMC6-202ENST00000381272 DHX8Q14562 1220 aaKnown RBP4.16□□□□□ -1.74
SMC6-202ENST00000381272 MTF1Q14872 753 aa4.16□□□□□ -1.74
SMC6-202ENST00000381272 KARSQ15046 597 aaKnown RBP4.16□□□□□ -1.74
SMC6-202ENST00000381272 SLC4A8Q2Y0W8 1093 aa4.16□□□□□ -1.74
SMC6-202ENST00000381272 ARHGAP29Q52LW3 1261 aa4.16□□□□□ -1.74
SMC6-202ENST00000381272 FAM47AQ5JRC9 791 aa4.16□□□□□ -1.74
SMC6-202ENST00000381272 IFIT1BQ5T764 474 aaKnown RBP4.16□□□□□ -1.74
SMC6-202ENST00000381272 UTP14CQ5TAP6 766 aaKnown RBP4.16□□□□□ -1.74
SMC6-202ENST00000381272 CD276Q5ZPR3 534 aa4.16□□□□□ -1.74
SMC6-202ENST00000381272 CTR9Q6PD62 1173 aa4.16□□□□□ -1.74
SMC6-202ENST00000381272 TRMT10BQ6PF06 316 aaKnown RBP4.16□□□□□ -1.74
SMC6-202ENST00000381272 CATIPQ7Z7H3 387 aa4.16□□□□□ -1.74
SMC6-202ENST00000381272 ANKRD18AQ8IVF6 992 aa4.16□□□□□ -1.74
SMC6-202ENST00000381272 ZC3H7AQ8IWR0 971 aaKnown RBP4.16□□□□□ -1.74
SMC6-202ENST00000381272 TC2NQ8N9U0 490 aa4.16□□□□□ -1.74
SMC6-202ENST00000381272 MLKLQ8NB16 471 aa4.16□□□□□ -1.74
SMC6-202ENST00000381272 ZSWIM2Q8NEG5 633 aa4.16□□□□□ -1.74
SMC6-202ENST00000381272 SH3RF2Q8TEC5 729 aa4.16□□□□□ -1.74
SMC6-202ENST00000381272 THAP3Q8WTV1 239 aaPredicted RBP4.16□□□□□ -1.74
SMC6-202ENST00000381272 PAGE5Q96GU1 130 aa4.16□□□□□ -1.74
SMC6-202ENST00000381272 BAG1Q99933 345 aaPredicted RBP4.16□□□□□ -1.74
SMC6-202ENST00000381272 DESI2Q9BSY9 194 aa4.16□□□□□ -1.74
SMC6-202ENST00000381272 CARD6Q9BX69 1037 aa4.16□□□□□ -1.74
SMC6-202ENST00000381272 GTPBP4Q9BZE4 634 aaKnown RBP4.16□□□□□ -1.74
SMC6-202ENST00000381272 CD244Q9BZW8 370 aa4.16□□□□□ -1.74
SMC6-202ENST00000381272 NDOR1Q9UHB4 597 aa4.16□□□□□ -1.74
SMC6-202ENST00000381272 SRPK3Q9UPE1 567 aa4.16□□□□□ -1.74
SMC6-202ENST00000381272 JAG2Q9Y219 1238 aa4.16□□□□□ -1.74
SMC6-202ENST00000381272 PPP2R2CQ9Y2T4 447 aa4.16□□□□□ -1.74
SMC6-202ENST00000381272 PHLPP2Q6ZVD8 1323 aa4.16□□□□□ -1.74
SMC6-202ENST00000381272 COL1A1P02452 1464 aaPredicted RBP4.16□□□□□ -1.74
SMC6-202ENST00000381272 A0A1B0GUL6 1792 aa4.16□□□□□ -1.74
SMC6-202ENST00000381272 MYH8P13535 1937 aa4.16□□□□□ -1.74
SMC6-202ENST00000381272 WNK3Q9BYP7 1800 aa4.16□□□□□ -1.74
SMC6-202ENST00000381272 A0A0U1RQJ8 604 aa4.16□□□□□ -1.74
SMC6-202ENST00000381272 ARHGAP6O43182 974 aa4.16□□□□□ -1.74
SMC6-202ENST00000381272 CCP110O43303 1012 aa4.16□□□□□ -1.74
SMC6-202ENST00000381272 ZSCAN12O43309 604 aa4.16□□□□□ -1.74
SMC6-202ENST00000381272 PRPF3O43395 683 aaKnown RBP4.16□□□□□ -1.74
SMC6-202ENST00000381272 KCNQ2O43526 872 aa4.16□□□□□ -1.74
SMC6-202ENST00000381272 CYP2D6P10635 497 aa4.16□□□□□ -1.74
SMC6-202ENST00000381272 PYGMP11217 842 aa4.16□□□□□ -1.74
SMC6-202ENST00000381272 VEGFAP15692 232 aaPredicted RBP4.16□□□□□ -1.74
SMC6-202ENST00000381272 ZNF18P17022 549 aa4.16□□□□□ -1.74
SMC6-202ENST00000381272 CASQ1P31415 396 aa4.16□□□□□ -1.74
SMC6-202ENST00000381272 GNG11P61952 73 aa4.16□□□□□ -1.74
SMC6-202ENST00000381272 PFKPQ01813 784 aa4.16□□□□□ -1.74
SMC6-202ENST00000381272 CACNA1SQ13698 1873 aa4.16□□□□□ -1.74
SMC6-202ENST00000381272 CRY1Q16526 586 aa4.16□□□□□ -1.74
SMC6-202ENST00000381272 DDB1Q16531 1140 aa4.16□□□□□ -1.74
SMC6-202ENST00000381272 SKIDA1Q1XH10 827 aa4.16□□□□□ -1.74
SMC6-202ENST00000381272 PARP10Q53GL7 1025 aa4.16□□□□□ -1.74
SMC6-202ENST00000381272 BTBD8Q5XKL5 378 aa4.16□□□□□ -1.74
SMC6-202ENST00000381272 SPECC1LQ69YQ0 1117 aa4.16□□□□□ -1.74
SMC6-202ENST00000381272 ZNF771Q7L3S4 317 aaPredicted RBP4.16□□□□□ -1.74
SMC6-202ENST00000381272 PRRT2Q7Z6L0 340 aaPredicted RBP4.16□□□□□ -1.74
SMC6-202ENST00000381272 OSTM1Q86WC4 334 aa4.16□□□□□ -1.74
SMC6-202ENST00000381272 CREBRFQ8IUR6 639 aa4.16□□□□□ -1.74
SMC6-202ENST00000381272 ELOA2Q8IYF1 753 aaPredicted RBP4.16□□□□□ -1.74
SMC6-202ENST00000381272 KRT222Q8N1A0 295 aa4.16□□□□□ -1.74
SMC6-202ENST00000381272 SRBD1Q8N5C6 995 aaKnown RBP4.16□□□□□ -1.74
SMC6-202ENST00000381272 MNS1Q8NEH6 495 aa4.16□□□□□ -1.74
SMC6-202ENST00000381272 ZNF384Q8TF68 577 aa4.16□□□□□ -1.74
SMC6-202ENST00000381272 ATRIPQ8WXE1 791 aa4.16□□□□□ -1.74
SMC6-202ENST00000381272 ZCCHC14Q8WYQ9 949 aaKnown RBP4.16□□□□□ -1.74
SMC6-202ENST00000381272 CELF1Q92879 486 aaKnown RBP4.16□□□□□ -1.74
SMC6-202ENST00000381272 MAGEB10Q96LZ2 347 aaPredicted RBP4.16□□□□□ -1.74
SMC6-202ENST00000381272 WDR24Q96S15 920 aa4.16□□□□□ -1.74
SMC6-202ENST00000381272 RIOK1Q9BRS2 568 aaKnown RBP4.16□□□□□ -1.74
SMC6-202ENST00000381272 RNF26Q9BY78 433 aaPredicted RBP4.16□□□□□ -1.74
SMC6-202ENST00000381272 OSBPL2Q9H1P3 480 aa4.16□□□□□ -1.74
SMC6-202ENST00000381272 BLZF1Q9H2G9 400 aa4.16□□□□□ -1.74
SMC6-202ENST00000381272 DUOX1Q9NRD9 1551 aa4.16□□□□□ -1.74
SMC6-202ENST00000381272 GNL3LQ9NVN8 582 aaKnown RBP4.16□□□□□ -1.74
SMC6-202ENST00000381272 AATFQ9NY61 560 aaKnown RBP eCLIP4.16□□□□□ -1.74
SMC6-202ENST00000381272 TFCP2L1Q9NZI6 479 aa4.16□□□□□ -1.74
SMC6-202ENST00000381272 ARHGAP20Q9P2F6 1191 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms