RNA–Protein interactions for RNA: ENST00000380707.8

SMN1-202, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMN1, Length 1,536 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-202ENST00000380707 TAB2Q9NYJ8 693 aa13.64□□□□□ -0.23
SMN1-202ENST00000380707 LIMA1Q9UHB6 759 aaKnown RBP13.64□□□□□ -0.23
SMN1-202ENST00000380707 NUB1Q9Y5A7 615 aa13.64□□□□□ -0.23
SMN1-202ENST00000380707 SF3B1O75533 1304 aaKnown RBP eCLIP13.63□□□□□ -0.23
SMN1-202ENST00000380707 LRRC10BA6NIK2 292 aa13.63□□□□□ -0.23
SMN1-202ENST00000380707 KPNA7A9QM74 516 aa13.63□□□□□ -0.23
SMN1-202ENST00000380707 RFXAPO00287 272 aa13.63□□□□□ -0.23
SMN1-202ENST00000380707 GRM6O15303 877 aa13.63□□□□□ -0.23
SMN1-202ENST00000380707 PMM2O15305 246 aa13.63□□□□□ -0.23
SMN1-202ENST00000380707 PNPLA4P41247 253 aa13.63□□□□□ -0.23
SMN1-202ENST00000380707 PIK3CAP42336 1068 aa13.63□□□□□ -0.23
SMN1-202ENST00000380707 TAF6P49848 677 aa13.63□□□□□ -0.23
SMN1-202ENST00000380707 KRT17Q04695 432 aa13.63□□□□□ -0.23
SMN1-202ENST00000380707 MYO1EQ12965 1108 aa13.63□□□□□ -0.23
SMN1-202ENST00000380707 GPM6BQ13491 265 aa13.63□□□□□ -0.23
SMN1-202ENST00000380707 DDX53Q86TM3 631 aaKnown RBP13.63□□□□□ -0.23
SMN1-202ENST00000380707 RNF168Q8IYW5 571 aaPredicted RBP13.63□□□□□ -0.23
SMN1-202ENST00000380707 FBXL13Q8NEE6 735 aa13.63□□□□□ -0.23
SMN1-202ENST00000380707 GDPD5Q8WTR4 605 aa13.63□□□□□ -0.23
SMN1-202ENST00000380707 B3GALT6Q96L58 329 aa13.63□□□□□ -0.23
SMN1-202ENST00000380707 ZNF560Q96MR9 790 aa13.63□□□□□ -0.23
SMN1-202ENST00000380707 ANP32EQ9BTT0 268 aa13.63□□□□□ -0.23
SMN1-202ENST00000380707 PI4K2AQ9BTU6 479 aa13.63□□□□□ -0.23
SMN1-202ENST00000380707 VPS16Q9H269 839 aa13.63□□□□□ -0.23
SMN1-202ENST00000380707 NDST4Q9H3R1 872 aa13.63□□□□□ -0.23
SMN1-202ENST00000380707 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.63□□□□□ -0.23
SMN1-202ENST00000380707 COQ4Q9Y3A0 265 aa13.63□□□□□ -0.23
SMN1-202ENST00000380707 R3HCC1Q9Y3T6 440 aaKnown RBP13.63□□□□□ -0.23
SMN1-202ENST00000380707 TMEM265A0A087WTH1 108 aa13.62□□□□□ -0.23
SMN1-202ENST00000380707 GOLGA6L19H0YKK7 550 aa13.62□□□□□ -0.23
SMN1-202ENST00000380707 MYL7Q01449 175 aa13.62□□□□□ -0.23
SMN1-202ENST00000380707 CAMK1Q14012 370 aa13.62□□□□□ -0.23
SMN1-202ENST00000380707 GRIN2CQ14957 1233 aa13.62□□□□□ -0.23
SMN1-202ENST00000380707 SGSM1Q2NKQ1 1148 aa13.62□□□□□ -0.23
SMN1-202ENST00000380707 SV2CQ496J9 727 aa13.62□□□□□ -0.23
SMN1-202ENST00000380707 FAM171A1Q5VUB5 890 aa13.62□□□□□ -0.23
SMN1-202ENST00000380707 VPS52Q8N1B4 723 aa13.62□□□□□ -0.23
SMN1-202ENST00000380707 POF1BQ8WVV4 589 aa13.62□□□□□ -0.23
SMN1-202ENST00000380707 SUSD3Q96L08 255 aa13.62□□□□□ -0.23
SMN1-202ENST00000380707 SENP8Q96LD8 212 aa13.62□□□□□ -0.23
SMN1-202ENST00000380707 RAB20Q9NX57 234 aa13.62□□□□□ -0.23
SMN1-202ENST00000380707 LZTS1Q9Y250 596 aa13.62□□□□□ -0.23
SMN1-202ENST00000380707 PLXNA4Q9HCM2 1894 aa13.62□□□□□ -0.23
SMN1-202ENST00000380707 M0QZQ0 153 aa13.61□□□□□ -0.23
SMN1-202ENST00000380707 PES1O00541 588 aaKnown RBP13.61□□□□□ -0.23
SMN1-202ENST00000380707 P4HA2O15460 535 aa13.61□□□□□ -0.23
SMN1-202ENST00000380707 TRAPPC3O43617 180 aa13.61□□□□□ -0.23
SMN1-202ENST00000380707 LPXNO60711 386 aa13.61□□□□□ -0.23
SMN1-202ENST00000380707 N4BP1O75113 896 aaKnown RBP13.61□□□□□ -0.23
SMN1-202ENST00000380707 STAU1O95793 577 aaKnown RBP13.61□□□□□ -0.23
SMN1-202ENST00000380707 ASS1P00966 412 aaKnown RBP13.61□□□□□ -0.23
SMN1-202ENST00000380707 SOD2P04179 222 aa13.61□□□□□ -0.23
SMN1-202ENST00000380707 ATICP31939 592 aa13.61□□□□□ -0.23
SMN1-202ENST00000380707 COPB1P53618 953 aaKnown RBP13.61□□□□□ -0.23
SMN1-202ENST00000380707 ERVFC1P60507 584 aa13.61□□□□□ -0.23
SMN1-202ENST00000380707 ZNF699Q32M78 642 aa13.61□□□□□ -0.23
SMN1-202ENST00000380707 WDR72Q3MJ13 1102 aa13.61□□□□□ -0.23
SMN1-202ENST00000380707 SPOPLQ6IQ16 392 aa13.61□□□□□ -0.23
SMN1-202ENST00000380707 DSTYKQ6XUX3 929 aa13.61□□□□□ -0.23
SMN1-202ENST00000380707 ANKRD20A12PQ8NF67 263 aa13.61□□□□□ -0.23
SMN1-202ENST00000380707 LMO3Q8TAP4 145 aa13.61□□□□□ -0.23
SMN1-202ENST00000380707 FAM161BQ96MY7 647 aa13.61□□□□□ -0.23
SMN1-202ENST00000380707 CRACR2AQ9BSW2 395 aa13.61□□□□□ -0.23
SMN1-202ENST00000380707 RBSNQ9H1K0 784 aa13.61□□□□□ -0.23
SMN1-202ENST00000380707 VRTNQ9H8Y1 702 aa13.61□□□□□ -0.23
SMN1-202ENST00000380707 CHST7Q9NS84 486 aa13.61□□□□□ -0.23
SMN1-202ENST00000380707 GDAP2Q9NXN4 497 aa13.61□□□□□ -0.23
SMN1-202ENST00000380707 PUF60Q9UHX1 559 aaKnown RBP13.61□□□□□ -0.23
SMN1-202ENST00000380707 TIMM13Q9Y5L4 95 aaPredicted RBP13.61□□□□□ -0.23
SMN1-202ENST00000380707 SNX9Q9Y5X1 595 aa13.61□□□□□ -0.23
SMN1-202ENST00000380707 COL6A3P12111 3177 aa13.61□□□□□ -0.23
SMN1-202ENST00000380707 CYB561D2O14569 222 aa13.6□□□□□ -0.23
SMN1-202ENST00000380707 CSPG5O95196 566 aa13.6□□□□□ -0.23
SMN1-202ENST00000380707 FGFR3P22607 806 aa13.6□□□□□ -0.23
SMN1-202ENST00000380707 PAX3P23760 479 aa13.6□□□□□ -0.23
SMN1-202ENST00000380707 TKTP29401 623 aaKnown RBP13.6□□□□□ -0.23
SMN1-202ENST00000380707 TPM4P67936 248 aa13.6□□□□□ -0.23
SMN1-202ENST00000380707 UBE3AQ05086 875 aa13.6□□□□□ -0.23
SMN1-202ENST00000380707 CETN1Q12798 172 aa13.6□□□□□ -0.23
SMN1-202ENST00000380707 ELAVL2Q12926 359 aaKnown RBP13.6□□□□□ -0.23
SMN1-202ENST00000380707 USP41Q3LFD5 358 aa13.6□□□□□ -0.23
SMN1-202ENST00000380707 RTP2Q5QGT7 225 aa13.6□□□□□ -0.23
SMN1-202ENST00000380707 ZNF697Q5TEC3 545 aa13.6□□□□□ -0.23
SMN1-202ENST00000380707 CEP57Q86XR8 500 aa13.6□□□□□ -0.23
SMN1-202ENST00000380707 AUTS2Q8WXX7 1259 aa13.6□□□□□ -0.23
SMN1-202ENST00000380707 TAF4BQ92750 862 aa13.6□□□□□ -0.23
SMN1-202ENST00000380707 TTPALQ9BTX7 342 aa13.6□□□□□ -0.23
SMN1-202ENST00000380707 ZBP1Q9H171 429 aa13.6□□□□□ -0.23
SMN1-202ENST00000380707 PRDM12Q9H4Q4 367 aa13.6□□□□□ -0.23
SMN1-202ENST00000380707 APOBEC3GQ9HC16 384 aaKnown RBP13.6□□□□□ -0.23
SMN1-202ENST00000380707 NXF1Q9UBU9 619 aaKnown RBP13.6□□□□□ -0.23
SMN1-202ENST00000380707 MYO9BQ13459 2157 aa13.6□□□□□ -0.23
SMN1-202ENST00000380707 CLSTN1O94985 981 aa13.59□□□□□ -0.23
SMN1-202ENST00000380707 FXR1P51114 621 aaKnown RBP eCLIP13.59□□□□□ -0.23
SMN1-202ENST00000380707 NOP14P78316 857 aaKnown RBP13.59□□□□□ -0.23
SMN1-202ENST00000380707 SOWAHAQ2M3V2 549 aa13.59□□□□□ -0.23
SMN1-202ENST00000380707 KIAA0319Q5VV43 1072 aa13.59□□□□□ -0.23
SMN1-202ENST00000380707 GPR153Q6NV75 609 aa13.59□□□□□ -0.23
SMN1-202ENST00000380707 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.59□□□□□ -0.23
SMN1-202ENST00000380707 Q7L0L9 218 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms