RNA–Protein interactions for RNA: ENST00000380276.6

U2AF1-202, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene U2AF1, Length 940 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-202ENST00000380276 ZNF334Q9HCZ1 680 aaPredicted RBP25.17■■□□□ 1.62
U2AF1-202ENST00000380276 PIAS3Q9Y6X2 628 aa25.17■■□□□ 1.62
U2AF1-202ENST00000380276 TICRRQ7Z2Z1 1910 aa25.16■■□□□ 1.62
U2AF1-202ENST00000380276 NPHP3-ACAD11A0A0J9YXS1 232 aa25.16■■□□□ 1.62
U2AF1-202ENST00000380276 PPP2R3AQ06190 1150 aa25.16■■□□□ 1.62
U2AF1-202ENST00000380276 MCL1Q07820 350 aa25.16■■□□□ 1.62
U2AF1-202ENST00000380276 SYT2Q8N9I0 419 aaPredicted RBP25.16■■□□□ 1.62
U2AF1-202ENST00000380276 PNMA5Q96PV4 448 aa25.16■■□□□ 1.62
U2AF1-202ENST00000380276 NTPCRQ9BSD7 190 aaKnown RBP25.16■■□□□ 1.62
U2AF1-202ENST00000380276 LMAN1LQ9HAT1 526 aa25.16■■□□□ 1.62
U2AF1-202ENST00000380276 PRMT8Q9NR22 394 aaPredicted RBP25.16■■□□□ 1.62
U2AF1-202ENST00000380276 USP18Q9UMW8 372 aa25.16■■□□□ 1.62
U2AF1-202ENST00000380276 KIF3AQ9Y496 699 aa25.16■■□□□ 1.62
U2AF1-202ENST00000380276 VWA3AA6NCI4 1184 aa25.15■■□□□ 1.62
U2AF1-202ENST00000380276 MOSPD3O75425 235 aa25.15■■□□□ 1.62
U2AF1-202ENST00000380276 CLTAP09496 248 aa25.15■■□□□ 1.62
U2AF1-202ENST00000380276 PLA2G4BP0C869 781 aa25.15■■□□□ 1.62
U2AF1-202ENST00000380276 LIG4P49917 911 aa25.15■■□□□ 1.62
U2AF1-202ENST00000380276 FZD5Q13467 585 aa25.15■■□□□ 1.62
U2AF1-202ENST00000380276 PPP2R5DQ14738 602 aa25.15■■□□□ 1.62
U2AF1-202ENST00000380276 CSGALNACT1Q8TDX6 532 aa25.15■■□□□ 1.62
U2AF1-202ENST00000380276 FAM212AQ96EL1 285 aa25.15■■□□□ 1.62
U2AF1-202ENST00000380276 EPC1Q9H2F5 836 aa25.15■■□□□ 1.62
U2AF1-202ENST00000380276 GMEB2Q9UKD1 530 aa25.15■■□□□ 1.62
U2AF1-202ENST00000380276 RAB23Q9ULC3 237 aa25.15■■□□□ 1.62
U2AF1-202ENST00000380276 MAFFQ9ULX9 164 aa25.15■■□□□ 1.62
U2AF1-202ENST00000380276 UBQLN1Q9UMX0 589 aaKnown RBP25.15■■□□□ 1.62
U2AF1-202ENST00000380276 SHISA7A6NL88 538 aa25.14■■□□□ 1.62
U2AF1-202ENST00000380276 HEPACAM2A8MVW5 462 aa25.14■■□□□ 1.62
U2AF1-202ENST00000380276 TNFSF9P41273 254 aa25.14■■□□□ 1.62
U2AF1-202ENST00000380276 GUCY2FP51841 1108 aa25.14■■□□□ 1.62
U2AF1-202ENST00000380276 PLD1Q13393 1074 aa25.14■■□□□ 1.62
U2AF1-202ENST00000380276 RILPL1Q5EBL4 403 aa25.14■■□□□ 1.62
U2AF1-202ENST00000380276 MAP4K3Q8IVH8 894 aa25.14■■□□□ 1.62
U2AF1-202ENST00000380276 GPR161Q8N6U8 529 aaKnown RBP25.14■■□□□ 1.62
U2AF1-202ENST00000380276 SHKBP1Q8TBC3 707 aa25.14■■□□□ 1.62
U2AF1-202ENST00000380276 CHRDQ9H2X0 955 aa25.14■■□□□ 1.62
U2AF1-202ENST00000380276 PLEKHA5Q9HAU0 1116 aa25.14■■□□□ 1.62
U2AF1-202ENST00000380276 DLL3Q9NYJ7 618 aa25.14■■□□□ 1.62
U2AF1-202ENST00000380276 LARSQ9P2J5 1176 aaKnown RBP25.14■■□□□ 1.62
U2AF1-202ENST00000380276 A0A1W2PRU2 124 aa25.13■■□□□ 1.61
U2AF1-202ENST00000380276 H0YCG3 227 aa25.13■■□□□ 1.61
U2AF1-202ENST00000380276 XPOTO43592 962 aaKnown RBP25.13■■□□□ 1.61
U2AF1-202ENST00000380276 LILRB5O75023 590 aa25.13■■□□□ 1.61
U2AF1-202ENST00000380276 CCNE1P24864 410 aa25.13■■□□□ 1.61
U2AF1-202ENST00000380276 ALDH1A3P47895 512 aa25.13■■□□□ 1.61
U2AF1-202ENST00000380276 EPHB3P54753 998 aa25.13■■□□□ 1.61
U2AF1-202ENST00000380276 SLC12A3P55017 1021 aa25.13■■□□□ 1.61
U2AF1-202ENST00000380276 ATP2C1P98194 919 aaPredicted RBP25.13■■□□□ 1.61
U2AF1-202ENST00000380276 DUSP4Q13115 394 aa25.13■■□□□ 1.61
U2AF1-202ENST00000380276 DHX8Q14562 1220 aaKnown RBP25.13■■□□□ 1.61
U2AF1-202ENST00000380276 LPAL2Q16609 132 aa25.13■■□□□ 1.61
U2AF1-202ENST00000380276 GPIHBP1Q8IV16 184 aa25.13■■□□□ 1.61
U2AF1-202ENST00000380276 FAM126AQ9BYI3 521 aaPredicted RBP25.13■■□□□ 1.61
U2AF1-202ENST00000380276 HAPLN2Q9GZV7 340 aa25.13■■□□□ 1.61
U2AF1-202ENST00000380276 ZNF292O60281 2723 aa25.12■■□□□ 1.61
U2AF1-202ENST00000380276 LACTBL1A8MY62 500 aa25.12■■□□□ 1.61
U2AF1-202ENST00000380276 M0QZQ0 153 aa25.12■■□□□ 1.61
U2AF1-202ENST00000380276 LRPAP1P30533 357 aa25.12■■□□□ 1.61
U2AF1-202ENST00000380276 KPNA1P52294 538 aaPredicted RBP25.12■■□□□ 1.61
U2AF1-202ENST00000380276 NRLP54845 237 aa25.12■■□□□ 1.61
U2AF1-202ENST00000380276 HYIQ5T013 277 aa25.12■■□□□ 1.61
U2AF1-202ENST00000380276 HAUS6Q7Z4H7 955 aa25.12■■□□□ 1.61
U2AF1-202ENST00000380276 MFSD6LQ8IWD5 586 aa25.12■■□□□ 1.61
U2AF1-202ENST00000380276 GPR88Q9GZN0 384 aa25.12■■□□□ 1.61
U2AF1-202ENST00000380276 RPF1Q9H9Y2 349 aaKnown RBP25.12■■□□□ 1.61
U2AF1-202ENST00000380276 NCANO14594 1321 aa25.12■■□□□ 1.61
U2AF1-202ENST00000380276 TTC26A0AVF1 554 aa25.11■■□□□ 1.61
U2AF1-202ENST00000380276 OR6C75A6NL08 312 aa25.11■■□□□ 1.61
U2AF1-202ENST00000380276 H3BQV1 296 aa25.11■■□□□ 1.61
U2AF1-202ENST00000380276 K7ENM7 598 aa25.11■■□□□ 1.61
U2AF1-202ENST00000380276 HNRNPDLO14979 420 aaKnown RBP25.11■■□□□ 1.61
U2AF1-202ENST00000380276 CCR3P51677 355 aa25.11■■□□□ 1.61
U2AF1-202ENST00000380276 EPHA5P54756 1037 aa25.11■■□□□ 1.61
U2AF1-202ENST00000380276 NCKAP1LP55160 1127 aa25.11■■□□□ 1.61
U2AF1-202ENST00000380276 OVOS1Q6IE37 1185 aa25.11■■□□□ 1.61
U2AF1-202ENST00000380276 PRR23BQ6ZRT6 265 aa25.11■■□□□ 1.61
U2AF1-202ENST00000380276 NELL1Q92832 810 aa25.11■■□□□ 1.61
U2AF1-202ENST00000380276 OXCT2Q9BYC2 517 aaPredicted RBP25.11■■□□□ 1.61
U2AF1-202ENST00000380276 ZHX3Q9H4I2 956 aa25.11■■□□□ 1.61
U2AF1-202ENST00000380276 KCND2Q9NZV8 630 aa25.11■■□□□ 1.61
U2AF1-202ENST00000380276 CDV3Q9UKY7 258 aaKnown RBP25.11■■□□□ 1.61
U2AF1-202ENST00000380276 SLC27A5Q9Y2P5 690 aa25.11■■□□□ 1.61
U2AF1-202ENST00000380276 COL4A2P08572 1712 aa25.11■■□□□ 1.61
U2AF1-202ENST00000380276 OTOGLQ3ZCN5 2332 aa25.11■■□□□ 1.61
U2AF1-202ENST00000380276 DPYSL4O14531 572 aa25.1■■□□□ 1.61
U2AF1-202ENST00000380276 OAZ2O95190 189 aa25.1■■□□□ 1.61
U2AF1-202ENST00000380276 ARMCX5Q6P1M9 558 aa25.1■■□□□ 1.61
U2AF1-202ENST00000380276 GPBP1Q86WP2 473 aa25.1■■□□□ 1.61
U2AF1-202ENST00000380276 MYCT1Q8N699 235 aa25.1■■□□□ 1.61
U2AF1-202ENST00000380276 E2F7Q96AV8 911 aa25.1■■□□□ 1.61
U2AF1-202ENST00000380276 IER2Q9BTL4 223 aa25.1■■□□□ 1.61
U2AF1-202ENST00000380276 CRISPLD1Q9H336 500 aa25.1■■□□□ 1.61
U2AF1-202ENST00000380276 TRPV4Q9HBA0 871 aa25.1■■□□□ 1.61
U2AF1-202ENST00000380276 TRPV5Q9NQA5 729 aa25.1■■□□□ 1.61
U2AF1-202ENST00000380276 GTF3C5Q9Y5Q8 519 aaPredicted RBP25.1■■□□□ 1.61
U2AF1-202ENST00000380276 DMXL1Q9Y485 3027 aa25.1■■□□□ 1.61
U2AF1-202ENST00000380276 SLC38A8A6NNN8 435 aa25.09■■□□□ 1.61
U2AF1-202ENST00000380276 FAM13AO94988 1023 aa25.09■■□□□ 1.61
U2AF1-202ENST00000380276 VNN2O95498 520 aa25.09■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms