RNA–Protein interactions for RNA: ENST00000379600.7

NHLRC3-202, Transcript of NHL repeat containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NHLRC3, Length 3,549 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-202ENST00000379600 SLC1A1P43005 524 aa9.92□□□□□ -0.82
NHLRC3-202ENST00000379600 CTCFP49711 727 aaPredicted RBP9.92□□□□□ -0.82
NHLRC3-202ENST00000379600 SETDB1Q15047 1291 aa9.92□□□□□ -0.82
NHLRC3-202ENST00000379600 KHDC1Q4VXA5 237 aaKnown RBP9.92□□□□□ -0.82
NHLRC3-202ENST00000379600 THEMIS2Q5TEJ8 643 aa9.92□□□□□ -0.82
NHLRC3-202ENST00000379600 SV2AQ7L0J3 742 aa9.92□□□□□ -0.82
NHLRC3-202ENST00000379600 CCDC89Q8N998 374 aa9.92□□□□□ -0.82
NHLRC3-202ENST00000379600 SPDYE1Q8NFV5 336 aaPredicted RBP9.92□□□□□ -0.82
NHLRC3-202ENST00000379600 PRR11Q96HE9 360 aaPredicted RBP9.92□□□□□ -0.82
NHLRC3-202ENST00000379600 MXRA8Q9BRK3 442 aa9.92□□□□□ -0.82
NHLRC3-202ENST00000379600 PLVAPQ9BX97 442 aa9.92□□□□□ -0.82
NHLRC3-202ENST00000379600 OSBPL8Q9BZF1 889 aa9.92□□□□□ -0.82
NHLRC3-202ENST00000379600 RANBP17Q9H2T7 1088 aaKnown RBP9.92□□□□□ -0.82
NHLRC3-202ENST00000379600 DBNDD1Q9H9R9 158 aa9.92□□□□□ -0.82
NHLRC3-202ENST00000379600 DNPEPQ9ULA0 475 aa9.92□□□□□ -0.82
NHLRC3-202ENST00000379600 POC1B-GALNT4F8VUJ3 575 aa9.91□□□□□ -0.82
NHLRC3-202ENST00000379600 KIF3CO14782 793 aa9.91□□□□□ -0.82
NHLRC3-202ENST00000379600 CYP1A1P04798 512 aaPredicted RBP9.91□□□□□ -0.82
NHLRC3-202ENST00000379600 PDHA1P08559 390 aa9.91□□□□□ -0.82
NHLRC3-202ENST00000379600 SSTR3P32745 418 aaPredicted RBP9.91□□□□□ -0.82
NHLRC3-202ENST00000379600 WNT7BP56706 349 aa9.91□□□□□ -0.82
NHLRC3-202ENST00000379600 GAD2Q05329 585 aa9.91□□□□□ -0.82
NHLRC3-202ENST00000379600 ALCAMQ13740 583 aa9.91□□□□□ -0.82
NHLRC3-202ENST00000379600 SPARCL1Q14515 664 aa9.91□□□□□ -0.82
NHLRC3-202ENST00000379600 EFTUD2Q15029 972 aaKnown RBP eCLIP9.91□□□□□ -0.82
NHLRC3-202ENST00000379600 CAPN12Q6ZSI9 719 aa9.91□□□□□ -0.82
NHLRC3-202ENST00000379600 ZNF365Q70YC5 407 aa9.91□□□□□ -0.82
NHLRC3-202ENST00000379600 TEX9Q8N6V9 391 aa9.91□□□□□ -0.82
NHLRC3-202ENST00000379600 PHC3Q8NDX5 983 aa9.91□□□□□ -0.82
NHLRC3-202ENST00000379600 FBXL13Q8NEE6 735 aa9.91□□□□□ -0.82
NHLRC3-202ENST00000379600 RFWD2Q8NHY2 731 aa9.91□□□□□ -0.82
NHLRC3-202ENST00000379600 MAIP1Q8WWC4 291 aa9.91□□□□□ -0.82
NHLRC3-202ENST00000379600 ZNF516Q92618 1163 aa9.91□□□□□ -0.82
NHLRC3-202ENST00000379600 NT5C1BQ96P26 610 aa9.91□□□□□ -0.82
NHLRC3-202ENST00000379600 RIT2Q99578 217 aa9.91□□□□□ -0.82
NHLRC3-202ENST00000379600 WDR83Q9BRX9 315 aaKnown RBP9.91□□□□□ -0.82
NHLRC3-202ENST00000379600 UBN1Q9NPG3 1134 aa9.91□□□□□ -0.82
NHLRC3-202ENST00000379600 KCNH7Q9NS40 1196 aa9.91□□□□□ -0.82
NHLRC3-202ENST00000379600 LIASO43766 372 aa9.91□□□□□ -0.82
NHLRC3-202ENST00000379600 MYBL1P10243 752 aa9.91□□□□□ -0.82
NHLRC3-202ENST00000379600 KRT10P13645 584 aa9.91□□□□□ -0.82
NHLRC3-202ENST00000379600 KRT5P13647 590 aa9.91□□□□□ -0.82
NHLRC3-202ENST00000379600 GPX6P59796 221 aa9.91□□□□□ -0.82
NHLRC3-202ENST00000379600 WASHC2DQ5SRD0 308 aa9.91□□□□□ -0.82
NHLRC3-202ENST00000379600 DSTYKQ6XUX3 929 aa9.91□□□□□ -0.82
NHLRC3-202ENST00000379600 CLNKQ7Z7G1 428 aa9.91□□□□□ -0.82
NHLRC3-202ENST00000379600 CCDC125Q86Z20 511 aa9.91□□□□□ -0.82
NHLRC3-202ENST00000379600 KATNAL2Q8IYT4 538 aa9.91□□□□□ -0.82
NHLRC3-202ENST00000379600 LARGE2Q8N3Y3 721 aa9.91□□□□□ -0.82
NHLRC3-202ENST00000379600 TMEM161BQ8NDZ6 487 aa9.91□□□□□ -0.82
NHLRC3-202ENST00000379600 ZNF75CPQ92670 426 aaPredicted RBP9.91□□□□□ -0.82
NHLRC3-202ENST00000379600 MFSD14AQ96MC6 490 aa9.91□□□□□ -0.82
NHLRC3-202ENST00000379600 CADM1Q9BY67 442 aaKnown RBP9.91□□□□□ -0.82
NHLRC3-202ENST00000379600 PIDD1Q9HB75 910 aa9.91□□□□□ -0.82
NHLRC3-202ENST00000379600 DNALI1O14645 258 aaPredicted RBP9.91□□□□□ -0.82
NHLRC3-202ENST00000379600 DCTN3O75935 186 aa9.91□□□□□ -0.82
NHLRC3-202ENST00000379600 MAMLD1Q13495 774 aa9.91□□□□□ -0.82
NHLRC3-202ENST00000379600 MIER3Q7Z3K6 550 aa9.91□□□□□ -0.82
NHLRC3-202ENST00000379600 MTDHQ86UE4 582 aaKnown RBP9.91□□□□□ -0.82
NHLRC3-202ENST00000379600 MZB1Q8WU39 189 aa9.91□□□□□ -0.82
NHLRC3-202ENST00000379600 UCMAQ8WVF2 138 aa9.91□□□□□ -0.82
NHLRC3-202ENST00000379600 BSNDQ8WZ55 320 aa9.91□□□□□ -0.82
NHLRC3-202ENST00000379600 ZBTB10Q96DT7 871 aa9.91□□□□□ -0.82
NHLRC3-202ENST00000379600 FBXL18Q96ME1 805 aa9.91□□□□□ -0.82
NHLRC3-202ENST00000379600 NPHS2Q9NP85 383 aa9.91□□□□□ -0.82
NHLRC3-202ENST00000379600 LNPEPQ9UIQ6 1025 aa9.91□□□□□ -0.82
NHLRC3-202ENST00000379600 ZBTB21Q9ULJ3 1066 aa9.91□□□□□ -0.82
NHLRC3-202ENST00000379600 TBX20Q9UMR3 447 aa9.91□□□□□ -0.82
NHLRC3-202ENST00000379600 ASTN2O75129 1339 aaPredicted RBP9.91□□□□□ -0.82
NHLRC3-202ENST00000379600 PI4K2BG5E9Z4 385 aa9.9□□□□□ -0.82
NHLRC3-202ENST00000379600 PSTPIP1O43586 416 aa9.9□□□□□ -0.82
NHLRC3-202ENST00000379600 P4HBP07237 508 aaKnown RBP9.9□□□□□ -0.82
NHLRC3-202ENST00000379600 ACADSP16219 412 aa9.9□□□□□ -0.82
NHLRC3-202ENST00000379600 CNGA1P29973 690 aa9.9□□□□□ -0.82
NHLRC3-202ENST00000379600 VPS72Q15906 364 aa9.9□□□□□ -0.82
NHLRC3-202ENST00000379600 WDR72Q3MJ13 1102 aa9.9□□□□□ -0.82
NHLRC3-202ENST00000379600 PLA2G4FQ68DD2 849 aa9.9□□□□□ -0.82
NHLRC3-202ENST00000379600 C4orf50Q6ZRC1 276 aa9.9□□□□□ -0.82
NHLRC3-202ENST00000379600 NLRP9Q7RTR0 991 aa9.9□□□□□ -0.82
NHLRC3-202ENST00000379600 TRMT1LQ7Z2T5 733 aaKnown RBP9.9□□□□□ -0.82
NHLRC3-202ENST00000379600 PTPRN2Q92932 1015 aa9.9□□□□□ -0.82
NHLRC3-202ENST00000379600 MRRFQ96E11 262 aaKnown RBP9.9□□□□□ -0.82
NHLRC3-202ENST00000379600 PTCD3Q96EY7 689 aaKnown RBP9.9□□□□□ -0.82
NHLRC3-202ENST00000379600 ZNF333Q96JL9 665 aa9.9□□□□□ -0.82
NHLRC3-202ENST00000379600 CCDC77Q9BR77 488 aa9.9□□□□□ -0.82
NHLRC3-202ENST00000379600 NMRK1Q9NWW6 199 aa9.9□□□□□ -0.82
NHLRC3-202ENST00000379600 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.9□□□□□ -0.82
NHLRC3-202ENST00000379600 ASB3Q9Y575 518 aa9.9□□□□□ -0.82
NHLRC3-202ENST00000379600 CLUHO75153 1309 aa9.9□□□□□ -0.82
NHLRC3-202ENST00000379600 NFASCO94856 1347 aa9.9□□□□□ -0.82
NHLRC3-202ENST00000379600 GSTTP1A0A1W2PQM5 241 aa9.9□□□□□ -0.82
NHLRC3-202ENST00000379600 C2CD2LO14523 706 aa9.9□□□□□ -0.82
NHLRC3-202ENST00000379600 ECE2O60344 883 aa9.9□□□□□ -0.82
NHLRC3-202ENST00000379600 ADRA1DP25100 572 aa9.9□□□□□ -0.82
NHLRC3-202ENST00000379600 RXRBP28702 533 aa9.9□□□□□ -0.82
NHLRC3-202ENST00000379600 YWHABP31946 246 aaKnown RBP9.9□□□□□ -0.82
NHLRC3-202ENST00000379600 SOX10P56693 466 aa9.9□□□□□ -0.82
NHLRC3-202ENST00000379600 CYP24A1Q07973 514 aa9.9□□□□□ -0.82
NHLRC3-202ENST00000379600 SPDYAQ5MJ70 313 aa9.9□□□□□ -0.82
NHLRC3-202ENST00000379600 LVRNQ6Q4G3 990 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms