RNA–Protein interactions for RNA: ENST00000378505.6

RPGR-203, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene RPGR, Length 4,767 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-203ENST00000378505 COL23A1Q86Y22 540 aaPredicted RBP11.87□□□□□ -0.51
RPGR-203ENST00000378505 OR6P1Q8NGX9 317 aa11.87□□□□□ -0.51
RPGR-203ENST00000378505 KCNV2Q8TDN2 545 aa11.87□□□□□ -0.51
RPGR-203ENST00000378505 IFT43Q96FT9 208 aa11.87□□□□□ -0.51
RPGR-203ENST00000378505 TSSK1BQ9BXA7 367 aa11.87□□□□□ -0.51
RPGR-203ENST00000378505 TRIM15Q9C019 465 aa11.87□□□□□ -0.51
RPGR-203ENST00000378505 GGT7Q9UJ14 662 aa11.87□□□□□ -0.51
RPGR-203ENST00000378505 F8W8V4 182 aa11.87□□□□□ -0.51
RPGR-203ENST00000378505 NVLO15381 856 aaKnown RBP11.87□□□□□ -0.51
RPGR-203ENST00000378505 C3orf67Q6ZVT6 689 aa11.87□□□□□ -0.51
RPGR-203ENST00000378505 SCFD2Q8WU76 684 aa11.87□□□□□ -0.51
RPGR-203ENST00000378505 PGBD4Q96DM1 585 aa11.87□□□□□ -0.51
RPGR-203ENST00000378505 FAM163AQ96GL9 167 aaPredicted RBP11.87□□□□□ -0.51
RPGR-203ENST00000378505 SERPINB12Q96P63 405 aa11.87□□□□□ -0.51
RPGR-203ENST00000378505 MED15Q96RN5 788 aa11.87□□□□□ -0.51
RPGR-203ENST00000378505 CENPKQ9BS16 269 aa11.87□□□□□ -0.51
RPGR-203ENST00000378505 ELP3Q9H9T3 547 aa11.87□□□□□ -0.51
RPGR-203ENST00000378505 AIPL1Q9NZN9 384 aa11.87□□□□□ -0.51
RPGR-203ENST00000378505 PIN4Q9Y237 131 aaKnown RBP11.87□□□□□ -0.51
RPGR-203ENST00000378505 TNS2Q63HR2 1409 aa11.86□□□□□ -0.51
RPGR-203ENST00000378505 F8VZ95 297 aa11.86□□□□□ -0.51
RPGR-203ENST00000378505 CLGNO14967 610 aa11.86□□□□□ -0.51
RPGR-203ENST00000378505 GAS2O43903 313 aaKnown RBP11.86□□□□□ -0.51
RPGR-203ENST00000378505 CUL2Q13617 745 aa11.86□□□□□ -0.51
RPGR-203ENST00000378505 RASSF3Q86WH2 238 aa11.86□□□□□ -0.51
RPGR-203ENST00000378505 AGGF1Q8N302 714 aaeCLIP11.86□□□□□ -0.51
RPGR-203ENST00000378505 PRPF31Q8WWY3 499 aaKnown RBP11.86□□□□□ -0.51
RPGR-203ENST00000378505 RAPGEF5Q92565 580 aa11.86□□□□□ -0.51
RPGR-203ENST00000378505 PNMA5Q96PV4 448 aa11.86□□□□□ -0.51
RPGR-203ENST00000378505 FAM118BQ9BPY3 351 aa11.86□□□□□ -0.51
RPGR-203ENST00000378505 GPRC5CQ9NQ84 441 aa11.86□□□□□ -0.51
RPGR-203ENST00000378505 NDE1Q9NXR1 346 aa11.86□□□□□ -0.51
RPGR-203ENST00000378505 RAB21Q9UL25 225 aa11.86□□□□□ -0.51
RPGR-203ENST00000378505 DDTLA6NHG4 134 aaPredicted RBP11.86□□□□□ -0.51
RPGR-203ENST00000378505 CCT8L1PA6NM43 557 aa11.86□□□□□ -0.51
RPGR-203ENST00000378505 AP3B1O00203 1094 aa11.86□□□□□ -0.51
RPGR-203ENST00000378505 ATP9BO43861 1147 aa11.86□□□□□ -0.51
RPGR-203ENST00000378505 GARTP22102 1010 aa11.86□□□□□ -0.51
RPGR-203ENST00000378505 MEI1Q5TIA1 1274 aa11.86□□□□□ -0.51
RPGR-203ENST00000378505 TRIML2Q8N7C3 387 aa11.86□□□□□ -0.51
RPGR-203ENST00000378505 GIPC2Q8TF65 315 aa11.86□□□□□ -0.51
RPGR-203ENST00000378505 ZBTB18Q99592 522 aa11.86□□□□□ -0.51
RPGR-203ENST00000378505 KIF9Q9HAQ2 790 aa11.86□□□□□ -0.51
RPGR-203ENST00000378505 TRAF3IP3Q9Y228 551 aa11.86□□□□□ -0.51
RPGR-203ENST00000378505 PIK3R2O00459 728 aa11.86□□□□□ -0.51
RPGR-203ENST00000378505 MGEA5O60502 916 aa11.86□□□□□ -0.51
RPGR-203ENST00000378505 SGPL1O95470 568 aa11.86□□□□□ -0.51
RPGR-203ENST00000378505 GH1P01241 217 aa11.86□□□□□ -0.51
RPGR-203ENST00000378505 PGM1P36871 562 aa11.86□□□□□ -0.51
RPGR-203ENST00000378505 SERPINB4P48594 390 aa11.86□□□□□ -0.51
RPGR-203ENST00000378505 TPI1P60174 286 aa11.86□□□□□ -0.51
RPGR-203ENST00000378505 BTBD8Q5XKL5 378 aa11.86□□□□□ -0.51
RPGR-203ENST00000378505 FBXW10Q5XX13 1052 aa11.86□□□□□ -0.51
RPGR-203ENST00000378505 NDUFAF2Q8N183 169 aa11.86□□□□□ -0.51
RPGR-203ENST00000378505 TMC2Q8TDI7 906 aa11.86□□□□□ -0.51
RPGR-203ENST00000378505 ZC3H15Q8WU90 426 aaKnown RBP11.86□□□□□ -0.51
RPGR-203ENST00000378505 MTMR8Q96EF0 704 aa11.86□□□□□ -0.51
RPGR-203ENST00000378505 ANKZF1Q9H8Y5 726 aa11.86□□□□□ -0.51
RPGR-203ENST00000378505 CHMP2BQ9UQN3 213 aa11.86□□□□□ -0.51
RPGR-203ENST00000378505 SPDYE2BA6NHP3 402 aa11.86□□□□□ -0.51
RPGR-203ENST00000378505 SPDYE6P0CI01 402 aa11.86□□□□□ -0.51
RPGR-203ENST00000378505 CYP11B1P15538 503 aa11.86□□□□□ -0.51
RPGR-203ENST00000378505 NPTX2P47972 431 aa11.86□□□□□ -0.51
RPGR-203ENST00000378505 CORO7P57737 925 aa11.86□□□□□ -0.51
RPGR-203ENST00000378505 TEDDM1Q5T9Z0 273 aa11.86□□□□□ -0.51
RPGR-203ENST00000378505 ARL8AQ96BM9 186 aa11.86□□□□□ -0.51
RPGR-203ENST00000378505 FRMD8Q9BZ67 464 aaPredicted RBP11.86□□□□□ -0.51
RPGR-203ENST00000378505 MOCS2O96007 188 aaPredicted RBP11.85□□□□□ -0.51
RPGR-203ENST00000378505 APOEP02649 317 aa11.85□□□□□ -0.51
RPGR-203ENST00000378505 RARGP13631 454 aa11.85□□□□□ -0.51
RPGR-203ENST00000378505 LRRC71Q8N4P6 559 aa11.85□□□□□ -0.51
RPGR-203ENST00000378505 APPL2Q8NEU8 664 aa11.85□□□□□ -0.51
RPGR-203ENST00000378505 OR6J1Q8NGC5 347 aa11.85□□□□□ -0.51
RPGR-203ENST00000378505 ERAP1Q9NZ08 941 aa11.85□□□□□ -0.51
RPGR-203ENST00000378505 SNRPAP09012 282 aaKnown RBP11.85□□□□□ -0.51
RPGR-203ENST00000378505 EEF1B2P24534 225 aaKnown RBP11.85□□□□□ -0.51
RPGR-203ENST00000378505 NFKBIAP25963 317 aa11.85□□□□□ -0.51
RPGR-203ENST00000378505 SHMT1P34896 483 aa11.85□□□□□ -0.51
RPGR-203ENST00000378505 GMPSP49915 693 aaPredicted RBP11.85□□□□□ -0.51
RPGR-203ENST00000378505 STX3Q13277 289 aa11.85□□□□□ -0.51
RPGR-203ENST00000378505 FASTKD1Q53R41 847 aaKnown RBP11.85□□□□□ -0.51
RPGR-203ENST00000378505 BOLA3Q53S33 107 aa11.85□□□□□ -0.51
RPGR-203ENST00000378505 CYP4F11Q9HBI6 524 aa11.85□□□□□ -0.51
RPGR-203ENST00000378505 GGA3Q9NZ52 723 aa11.85□□□□□ -0.51
RPGR-203ENST00000378505 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.85□□□□□ -0.51
RPGR-203ENST00000378505 OGTO15294 1046 aa11.85□□□□□ -0.51
RPGR-203ENST00000378505 PSTPIP1O43586 416 aa11.85□□□□□ -0.51
RPGR-203ENST00000378505 SNX2O60749 519 aa11.85□□□□□ -0.51
RPGR-203ENST00000378505 CD4P01730 458 aa11.85□□□□□ -0.51
RPGR-203ENST00000378505 EZH2Q15910 746 aaKnown RBP11.85□□□□□ -0.51
RPGR-203ENST00000378505 C3orf20Q8ND61 904 aa11.85□□□□□ -0.51
RPGR-203ENST00000378505 ATP8B4Q8TF62 1192 aa11.85□□□□□ -0.51
RPGR-203ENST00000378505 ERP27Q96DN0 273 aa11.85□□□□□ -0.51
RPGR-203ENST00000378505 TSC22D3Q99576 134 aa11.85□□□□□ -0.51
RPGR-203ENST00000378505 NPHS2Q9NP85 383 aa11.85□□□□□ -0.51
RPGR-203ENST00000378505 KCND1Q9NSA2 647 aa11.85□□□□□ -0.51
RPGR-203ENST00000378505 C3orf70A6NLC5 250 aaPredicted RBP11.84□□□□□ -0.51
RPGR-203ENST00000378505 PPFIA2O75334 1257 aa11.84□□□□□ -0.51
RPGR-203ENST00000378505 PYGBP11216 843 aa11.84□□□□□ -0.51
RPGR-203ENST00000378505 BRD2P25440 801 aaKnown RBP11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms