RNA–Protein interactions for RNA: ENST00000378362.3

GFRA3-202, Transcript of GDNF family receptor alpha 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GFRA3, Length 1,837 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3-202ENST00000378362 CXorf38Q8TB03 319 aa23.66■■□□□ 1.38
GFRA3-202ENST00000378362 GOLGA5Q8TBA6 731 aa23.66■■□□□ 1.38
GFRA3-202ENST00000378362 CASP10Q92851 521 aa23.66■■□□□ 1.38
GFRA3-202ENST00000378362 S1PR5Q9H228 398 aa23.66■■□□□ 1.38
GFRA3-202ENST00000378362 KIAA1586Q9HCI6 787 aa23.66■■□□□ 1.38
GFRA3-202ENST00000378362 MBTPS2O43462 519 aa23.66■■□□□ 1.38
GFRA3-202ENST00000378362 GLUD1P00367 558 aa23.66■■□□□ 1.38
GFRA3-202ENST00000378362 SP100P23497 879 aaPredicted RBP23.66■■□□□ 1.38
GFRA3-202ENST00000378362 NR2F2P24468 414 aa23.66■■□□□ 1.38
GFRA3-202ENST00000378362 KLHL10Q6JEL2 608 aa23.66■■□□□ 1.38
GFRA3-202ENST00000378362 FNBP1Q96RU3 617 aa23.66■■□□□ 1.38
GFRA3-202ENST00000378362 CGNQ9P2M7 1197 aaKnown RBP23.66■■□□□ 1.38
GFRA3-202ENST00000378362 TRAF3IP3Q9Y228 551 aa23.66■■□□□ 1.38
GFRA3-202ENST00000378362 USP15Q9Y4E8 981 aaPredicted RBP23.66■■□□□ 1.38
GFRA3-202ENST00000378362 CALUO43852 315 aaPredicted RBP23.65■■□□□ 1.38
GFRA3-202ENST00000378362 OR4Q2P0C623 313 aa23.65■■□□□ 1.38
GFRA3-202ENST00000378362 AARSP49588 968 aaKnown RBP eCLIP23.65■■□□□ 1.38
GFRA3-202ENST00000378362 ADAMTS19Q8TE59 1207 aa23.65■■□□□ 1.38
GFRA3-202ENST00000378362 CACTINQ8WUQ7 758 aaKnown RBP23.65■■□□□ 1.38
GFRA3-202ENST00000378362 MFSD14AQ96MC6 490 aa23.65■■□□□ 1.38
GFRA3-202ENST00000378362 TSPAN18Q96SJ8 248 aa23.65■■□□□ 1.38
GFRA3-202ENST00000378362 COL25A1Q9BXS0 654 aaPredicted RBP23.65■■□□□ 1.38
GFRA3-202ENST00000378362 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP23.65■■□□□ 1.38
GFRA3-202ENST00000378362 FNIP2Q9P278 1114 aa23.65■■□□□ 1.38
GFRA3-202ENST00000378362 MTRRQ9UBK8 725 aa23.65■■□□□ 1.38
GFRA3-202ENST00000378362 M0QZQ0 153 aa23.64■■□□□ 1.38
GFRA3-202ENST00000378362 AKAP3O75969 853 aa23.64■■□□□ 1.38
GFRA3-202ENST00000378362 PSMD6Q15008 389 aa23.64■■□□□ 1.38
GFRA3-202ENST00000378362 CTXN3Q4LDR2 81 aa23.64■■□□□ 1.38
GFRA3-202ENST00000378362 ANKRD36BP1Q96IX9 119 aa23.64■■□□□ 1.38
GFRA3-202ENST00000378362 PCDHB8Q9UN66 801 aa23.64■■□□□ 1.38
GFRA3-202ENST00000378362 MTCL1Q9Y4B5 1905 aaKnown RBP23.64■■□□□ 1.38
GFRA3-202ENST00000378362 SYN3O14994 580 aa23.63■■□□□ 1.37
GFRA3-202ENST00000378362 CST3P01034 146 aaPredicted RBP23.63■■□□□ 1.37
GFRA3-202ENST00000378362 TAF6P49848 677 aa23.63■■□□□ 1.37
GFRA3-202ENST00000378362 ADAM9Q13443 819 aa23.63■■□□□ 1.37
GFRA3-202ENST00000378362 DUOXA2Q1HG44 320 aa23.63■■□□□ 1.37
GFRA3-202ENST00000378362 ZCWPW2Q504Y3 356 aa23.63■■□□□ 1.37
GFRA3-202ENST00000378362 ANKRD40Q6AI12 368 aa23.63■■□□□ 1.37
GFRA3-202ENST00000378362 ANKS3Q6ZW76 656 aa23.63■■□□□ 1.37
GFRA3-202ENST00000378362 PPFIBP1Q86W92 1011 aa23.63■■□□□ 1.37
GFRA3-202ENST00000378362 BORCS6Q96GS4 357 aa23.63■■□□□ 1.37
GFRA3-202ENST00000378362 FBXL5Q9UKA1 691 aa23.63■■□□□ 1.37
GFRA3-202ENST00000378362 LRRIQ3A6PVS8 624 aaPredicted RBP23.63■■□□□ 1.37
GFRA3-202ENST00000378362 CYB561D2O14569 222 aa23.63■■□□□ 1.37
GFRA3-202ENST00000378362 KIF20AO95235 890 aa23.63■■□□□ 1.37
GFRA3-202ENST00000378362 BFSP1Q12934 665 aa23.63■■□□□ 1.37
GFRA3-202ENST00000378362 LILRA6Q6PI73 481 aa23.63■■□□□ 1.37
GFRA3-202ENST00000378362 TRAPPC11Q7Z392 1133 aa23.63■■□□□ 1.37
GFRA3-202ENST00000378362 NT5DC4Q86YG4 428 aa23.63■■□□□ 1.37
GFRA3-202ENST00000378362 SLC9A9Q8IVB4 645 aa23.63■■□□□ 1.37
GFRA3-202ENST00000378362 ELOA2Q8IYF1 753 aaPredicted RBP23.63■■□□□ 1.37
GFRA3-202ENST00000378362 ADSSL1Q8N142 457 aa23.63■■□□□ 1.37
GFRA3-202ENST00000378362 KREMEN2Q8NCW0 462 aa23.63■■□□□ 1.37
GFRA3-202ENST00000378362 GBP4Q96PP9 640 aa23.63■■□□□ 1.37
GFRA3-202ENST00000378362 TMEM209Q96SK2 561 aa23.63■■□□□ 1.37
GFRA3-202ENST00000378362 TNNC2P02585 160 aa23.62■■□□□ 1.37
GFRA3-202ENST00000378362 SRGAP2BP0DMP2 458 aa23.62■■□□□ 1.37
GFRA3-202ENST00000378362 YWHAHQ04917 246 aaPredicted RBP23.62■■□□□ 1.37
GFRA3-202ENST00000378362 SMAD4Q13485 552 aaKnown RBP23.62■■□□□ 1.37
GFRA3-202ENST00000378362 MORC3Q14149 939 aa23.62■■□□□ 1.37
GFRA3-202ENST00000378362 MRPL58Q14197 206 aaKnown RBP23.62■■□□□ 1.37
GFRA3-202ENST00000378362 WSCD1Q658N2 575 aa23.62■■□□□ 1.37
GFRA3-202ENST00000378362 WDR49Q8IV35 697 aa23.62■■□□□ 1.37
GFRA3-202ENST00000378362 GPT2Q8TD30 523 aa23.62■■□□□ 1.37
GFRA3-202ENST00000378362 PARD3BQ8TEW8 1205 aa23.62■■□□□ 1.37
GFRA3-202ENST00000378362 CGRRF1Q99675 332 aa23.62■■□□□ 1.37
GFRA3-202ENST00000378362 UTP3Q9NQZ2 479 aaKnown RBP eCLIP23.62■■□□□ 1.37
GFRA3-202ENST00000378362 C2orf16Q68DN1 1984 aa23.62■■□□□ 1.37
GFRA3-202ENST00000378362 KPNA7A9QM74 516 aa23.61■■□□□ 1.37
GFRA3-202ENST00000378362 ROR1Q01973 937 aa23.61■■□□□ 1.37
GFRA3-202ENST00000378362 USP37Q86T82 979 aa23.61■■□□□ 1.37
GFRA3-202ENST00000378362 APPL2Q8NEU8 664 aa23.61■■□□□ 1.37
GFRA3-202ENST00000378362 MMRN2Q9H8L6 949 aa23.61■■□□□ 1.37
GFRA3-202ENST00000378362 CD320Q9NPF0 282 aa23.61■■□□□ 1.37
GFRA3-202ENST00000378362 KIAA1468Q9P260 1216 aa23.61■■□□□ 1.37
GFRA3-202ENST00000378362 ITGA11Q9UKX5 1188 aa23.61■■□□□ 1.37
GFRA3-202ENST00000378362 FRMD4BQ9Y2L6 1034 aa23.61■■□□□ 1.37
GFRA3-202ENST00000378362 WDR27A2RRH5 827 aa23.61■■□□□ 1.37
GFRA3-202ENST00000378362 TBC1D4O60343 1298 aa23.61■■□□□ 1.37
GFRA3-202ENST00000378362 TRIM49P0CI25 452 aa23.61■■□□□ 1.37
GFRA3-202ENST00000378362 TRIM49CP0CI26 452 aa23.61■■□□□ 1.37
GFRA3-202ENST00000378362 STX17P56962 302 aa23.61■■□□□ 1.37
GFRA3-202ENST00000378362 OVOS1Q6IE37 1185 aa23.61■■□□□ 1.37
GFRA3-202ENST00000378362 PGLYRP2Q96PD5 576 aa23.61■■□□□ 1.37
GFRA3-202ENST00000378362 UHRF1Q96T88 793 aaPredicted RBP23.61■■□□□ 1.37
GFRA3-202ENST00000378362 CCDC195A0A1B0GUA6 201 aa23.6■■□□□ 1.37
GFRA3-202ENST00000378362 PPP1R3GB7ZBB8 358 aa23.6■■□□□ 1.37
GFRA3-202ENST00000378362 HCRTO43612 131 aa23.6■■□□□ 1.37
GFRA3-202ENST00000378362 RBP5P82980 135 aa23.6■■□□□ 1.37
GFRA3-202ENST00000378362 SURF1Q15526 300 aa23.6■■□□□ 1.37
GFRA3-202ENST00000378362 SMAD2Q15796 467 aaKnown RBP23.6■■□□□ 1.37
GFRA3-202ENST00000378362 C1orf220Q5T0J3 134 aa23.6■■□□□ 1.37
GFRA3-202ENST00000378362 CENPPQ6IPU0 288 aa23.6■■□□□ 1.37
GFRA3-202ENST00000378362 CLSTN2Q9H4D0 955 aa23.6■■□□□ 1.37
GFRA3-202ENST00000378362 SNX9Q9Y5X1 595 aa23.6■■□□□ 1.37
GFRA3-202ENST00000378362 BACE2Q9Y5Z0 518 aa23.6■■□□□ 1.37
GFRA3-202ENST00000378362 FSD2A1L4K1 749 aa23.59■■□□□ 1.37
GFRA3-202ENST00000378362 ODC1P11926 461 aa23.59■■□□□ 1.37
GFRA3-202ENST00000378362 RAB33AQ14088 237 aa23.59■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms