RNA–Protein interactions for RNA: ENST00000378026.4

CKAP4-201, Transcript of cytoskeleton associated protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKAP4, Length 3,093 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-201ENST00000378026 LRRC23Q53EV4 343 aaPredicted RBP16.79■□□□□ 0.28
CKAP4-201ENST00000378026 SYDE2Q5VT97 1194 aa16.79■□□□□ 0.28
CKAP4-201ENST00000378026 SLFN13Q68D06 897 aa16.79■□□□□ 0.28
CKAP4-201ENST00000378026 ANKS1BQ7Z6G8 1248 aa16.79■□□□□ 0.28
CKAP4-201ENST00000378026 FAM71AQ8IYT1 594 aa16.79■□□□□ 0.28
CKAP4-201ENST00000378026 NSL1Q96IY1 281 aa16.79■□□□□ 0.28
CKAP4-201ENST00000378026 FAM161BQ96MY7 647 aa16.79■□□□□ 0.28
CKAP4-201ENST00000378026 HSD17B14Q9BPX1 270 aa16.79■□□□□ 0.28
CKAP4-201ENST00000378026 ANKFY1Q9P2R3 1169 aa16.79■□□□□ 0.28
CKAP4-201ENST00000378026 SMG5Q9UPR3 1016 aaKnown RBP16.79■□□□□ 0.28
CKAP4-201ENST00000378026 ZNF148Q9UQR1 794 aa16.79■□□□□ 0.28
CKAP4-201ENST00000378026 DOT1LQ8TEK3 1739 aa16.79■□□□□ 0.28
CKAP4-201ENST00000378026 TBX3O15119 743 aa16.78■□□□□ 0.28
CKAP4-201ENST00000378026 PRPF4O43172 522 aaKnown RBP eCLIP16.78■□□□□ 0.28
CKAP4-201ENST00000378026 MAN1A1P33908 653 aa16.78■□□□□ 0.28
CKAP4-201ENST00000378026 SHMT1P34896 483 aa16.78■□□□□ 0.28
CKAP4-201ENST00000378026 AP3B2Q13367 1082 aa16.78■□□□□ 0.28
CKAP4-201ENST00000378026 SYDE1Q6ZW31 735 aaPredicted RBP16.78■□□□□ 0.28
CKAP4-201ENST00000378026 TTC1Q99614 292 aa16.78■□□□□ 0.28
CKAP4-201ENST00000378026 SYNCQ9H7C4 482 aa16.78■□□□□ 0.28
CKAP4-201ENST00000378026 KRT82Q9NSB4 513 aa16.78■□□□□ 0.28
CKAP4-201ENST00000378026 TAS2R1Q9NYW7 299 aa16.78■□□□□ 0.28
CKAP4-201ENST00000378026 LNPEPQ9UIQ6 1025 aa16.78■□□□□ 0.28
CKAP4-201ENST00000378026 IFNB1P01574 187 aa16.78■□□□□ 0.28
CKAP4-201ENST00000378026 RFX1P22670 979 aa16.78■□□□□ 0.28
CKAP4-201ENST00000378026 ARFIP2P53365 341 aa16.78■□□□□ 0.28
CKAP4-201ENST00000378026 GTF2IP78347 998 aa16.78■□□□□ 0.28
CKAP4-201ENST00000378026 OCRLQ01968 901 aa16.78■□□□□ 0.28
CKAP4-201ENST00000378026 TCEAL1Q15170 157 aa16.78■□□□□ 0.28
CKAP4-201ENST00000378026 APLFQ8IW19 511 aaPredicted RBP16.78■□□□□ 0.28
CKAP4-201ENST00000378026 CRYGNQ8WXF5 182 aa16.78■□□□□ 0.28
CKAP4-201ENST00000378026 RBM41Q96IZ5 413 aaKnown RBP16.78■□□□□ 0.28
CKAP4-201ENST00000378026 TLE6Q9H808 572 aa16.78■□□□□ 0.28
CKAP4-201ENST00000378026 SLC17A7Q9P2U7 560 aa16.78■□□□□ 0.28
CKAP4-201ENST00000378026 SLC26A4O43511 780 aa16.78■□□□□ 0.28
CKAP4-201ENST00000378026 GSTA2P09210 222 aa16.78■□□□□ 0.28
CKAP4-201ENST00000378026 SCNN1DP51172 638 aa16.78■□□□□ 0.28
CKAP4-201ENST00000378026 GPS1Q13098 491 aa16.78■□□□□ 0.28
CKAP4-201ENST00000378026 WDR72Q3MJ13 1102 aa16.78■□□□□ 0.28
CKAP4-201ENST00000378026 ATP13A4Q4VNC1 1196 aa16.78■□□□□ 0.28
CKAP4-201ENST00000378026 C1orf220Q5T0J3 134 aa16.78■□□□□ 0.28
CKAP4-201ENST00000378026 TCP10LQ8TDR4 215 aa16.78■□□□□ 0.28
CKAP4-201ENST00000378026 GATA6Q92908 595 aa16.78■□□□□ 0.28
CKAP4-201ENST00000378026 PTPRN2Q92932 1015 aa16.78■□□□□ 0.28
CKAP4-201ENST00000378026 TRAPPC9Q96Q05 1148 aa16.78■□□□□ 0.28
CKAP4-201ENST00000378026 ZNF184Q99676 751 aaPredicted RBP16.78■□□□□ 0.28
CKAP4-201ENST00000378026 GLT8D2Q9H1C3 349 aa16.78■□□□□ 0.28
CKAP4-201ENST00000378026 SAR1AQ9NR31 198 aa16.78■□□□□ 0.28
CKAP4-201ENST00000378026 MYH11P35749 1972 aa16.77■□□□□ 0.28
CKAP4-201ENST00000378026 ATF7P17544 494 aaPredicted RBP16.77■□□□□ 0.28
CKAP4-201ENST00000378026 PGM1P36871 562 aa16.77■□□□□ 0.28
CKAP4-201ENST00000378026 MCL1Q07820 350 aa16.77■□□□□ 0.28
CKAP4-201ENST00000378026 PDIA2Q13087 525 aaKnown RBP16.77■□□□□ 0.28
CKAP4-201ENST00000378026 ACAD10Q6JQN1 1059 aa16.77■□□□□ 0.28
CKAP4-201ENST00000378026 RIBC1Q8N443 379 aaPredicted RBP16.77■□□□□ 0.28
CKAP4-201ENST00000378026 TUBGCP5Q96RT8 1024 aa16.77■□□□□ 0.28
CKAP4-201ENST00000378026 AMNQ9BXJ7 453 aa16.77■□□□□ 0.28
CKAP4-201ENST00000378026 OSBPL8Q9BZF1 889 aa16.77■□□□□ 0.28
CKAP4-201ENST00000378026 CYLDQ9NQC7 956 aa16.77■□□□□ 0.28
CKAP4-201ENST00000378026 TOPORSQ9NS56 1045 aaPredicted RBP16.77■□□□□ 0.28
CKAP4-201ENST00000378026 C6orf229H3BNL8 230 aa16.77■□□□□ 0.27
CKAP4-201ENST00000378026 PIK3CDO00329 1044 aa16.77■□□□□ 0.27
CKAP4-201ENST00000378026 TYROBPO43914 113 aa16.77■□□□□ 0.27
CKAP4-201ENST00000378026 FDX1P10109 184 aa16.77■□□□□ 0.27
CKAP4-201ENST00000378026 ARSEP51690 589 aa16.77■□□□□ 0.27
CKAP4-201ENST00000378026 HSPA2P54652 639 aa16.77■□□□□ 0.27
CKAP4-201ENST00000378026 AP1B1Q10567 949 aa16.77■□□□□ 0.27
CKAP4-201ENST00000378026 LRRC36Q1X8D7 754 aa16.77■□□□□ 0.27
CKAP4-201ENST00000378026 EAPPQ56P03 285 aaPredicted RBP16.77■□□□□ 0.27
CKAP4-201ENST00000378026 IZUMO2Q6UXV1 221 aa16.77■□□□□ 0.27
CKAP4-201ENST00000378026 OTOP1Q7RTM1 612 aa16.77■□□□□ 0.27
CKAP4-201ENST00000378026 FBXO11Q86XK2 927 aa16.77■□□□□ 0.27
CKAP4-201ENST00000378026 ZCCHC9Q8N567 271 aaKnown RBP16.77■□□□□ 0.27
CKAP4-201ENST00000378026 DDX27Q96GQ7 796 aaKnown RBP16.77■□□□□ 0.27
CKAP4-201ENST00000378026 CLPTM1LQ96KA5 538 aa16.77■□□□□ 0.27
CKAP4-201ENST00000378026 PI4K2AQ9BTU6 479 aa16.77■□□□□ 0.27
CKAP4-201ENST00000378026 MROH7Q68CQ1 1323 aa16.77■□□□□ 0.27
CKAP4-201ENST00000378026 LAMB2P55268 1798 aa16.77■□□□□ 0.27
CKAP4-201ENST00000378026 ARHGEF35A5YM69 484 aa16.76■□□□□ 0.27
CKAP4-201ENST00000378026 USP1O94782 785 aa16.76■□□□□ 0.27
CKAP4-201ENST00000378026 ZWINTO95229 277 aa16.76■□□□□ 0.27
CKAP4-201ENST00000378026 CFBP00751 764 aa16.76■□□□□ 0.27
CKAP4-201ENST00000378026 CYP1A1P04798 512 aaPredicted RBP16.76■□□□□ 0.27
CKAP4-201ENST00000378026 LYNP07948 512 aa16.76■□□□□ 0.27
CKAP4-201ENST00000378026 YY1P25490 414 aa16.76■□□□□ 0.27
CKAP4-201ENST00000378026 SREBF1P36956 1147 aa16.76■□□□□ 0.27
CKAP4-201ENST00000378026 MFAP3P55082 362 aa16.76■□□□□ 0.27
CKAP4-201ENST00000378026 TAS2R40P59535 323 aa16.76■□□□□ 0.27
CKAP4-201ENST00000378026 CCDC62Q6P9F0 684 aa16.76■□□□□ 0.27
CKAP4-201ENST00000378026 MOXD1Q6UVY6 613 aa16.76■□□□□ 0.27
CKAP4-201ENST00000378026 SLC25A41Q8N5S1 370 aa16.76■□□□□ 0.27
CKAP4-201ENST00000378026 SH3TC2Q8TF17 1288 aa16.76■□□□□ 0.27
CKAP4-201ENST00000378026 WDR18Q9BV38 432 aa16.76■□□□□ 0.27
CKAP4-201ENST00000378026 TMEM120AQ9BXJ8 343 aa16.76■□□□□ 0.27
CKAP4-201ENST00000378026 TRIM55Q9BYV6 548 aa16.76■□□□□ 0.27
CKAP4-201ENST00000378026 SSTR1P30872 391 aa16.76■□□□□ 0.27
CKAP4-201ENST00000378026 PLCB3Q01970 1234 aa16.76■□□□□ 0.27
CKAP4-201ENST00000378026 SLC15A2Q16348 729 aa16.76■□□□□ 0.27
CKAP4-201ENST00000378026 NFIL3Q16649 462 aa16.76■□□□□ 0.27
CKAP4-201ENST00000378026 CNPY1Q3B7I2 92 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms