RNA–Protein interactions for RNA: ENST00000377833.8

CUBN-202, Transcript of cubilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUBN, Length 11,949 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUBN-202ENST00000377833 SESN3P58005 492 aa6.3□□□□□ -1.4
CUBN-202ENST00000377833 KRT72Q14CN4 511 aa6.3□□□□□ -1.4
CUBN-202ENST00000377833 PTF1AQ7RTS3 328 aa6.3□□□□□ -1.4
CUBN-202ENST00000377833 DNERQ8NFT8 737 aa6.3□□□□□ -1.4
CUBN-202ENST00000377833 KLHDC4Q8TBB5 520 aa6.3□□□□□ -1.4
CUBN-202ENST00000377833 ZFRQ96KR1 1074 aaKnown RBP6.3□□□□□ -1.4
CUBN-202ENST00000377833 PHF20Q9BVI0 1012 aa6.3□□□□□ -1.4
CUBN-202ENST00000377833 SMURF2Q9HAU4 748 aa6.3□□□□□ -1.4
CUBN-202ENST00000377833 SMYD2Q9NRG4 433 aa6.3□□□□□ -1.4
CUBN-202ENST00000377833 USP17L15C9J2P7 530 aa6.3□□□□□ -1.4
CUBN-202ENST00000377833 USP17L13C9JLJ4 530 aa6.3□□□□□ -1.4
CUBN-202ENST00000377833 USP17L11C9JVI0 530 aa6.3□□□□□ -1.4
CUBN-202ENST00000377833 USP17L18D6R9N7 530 aa6.3□□□□□ -1.4
CUBN-202ENST00000377833 USP17L22D6RA61 530 aa6.3□□□□□ -1.4
CUBN-202ENST00000377833 USP17L17D6RBQ6 530 aa6.3□□□□□ -1.4
CUBN-202ENST00000377833 USP17L19D6RCP7 530 aa6.3□□□□□ -1.4
CUBN-202ENST00000377833 USP17L20D6RJB6 530 aa6.3□□□□□ -1.4
CUBN-202ENST00000377833 USP17L24Q0WX57 530 aa6.3□□□□□ -1.4
CUBN-202ENST00000377833 GRM3Q14832 879 aa6.3□□□□□ -1.4
CUBN-202ENST00000377833 FAF2Q96CS3 445 aa6.3□□□□□ -1.4
CUBN-202ENST00000377833 OXCT2Q9BYC2 517 aaPredicted RBP6.3□□□□□ -1.4
CUBN-202ENST00000377833 MUC13Q9H3R2 512 aa6.3□□□□□ -1.4
CUBN-202ENST00000377833 PTPN22Q9Y2R2 807 aa6.3□□□□□ -1.4
CUBN-202ENST00000377833 ROBO3Q96MS0 1386 aa6.3□□□□□ -1.4
CUBN-202ENST00000377833 DPYSL4O14531 572 aa6.3□□□□□ -1.4
CUBN-202ENST00000377833 KLHL41O60662 606 aa6.3□□□□□ -1.4
CUBN-202ENST00000377833 STAG3L1P0CL83 205 aa6.3□□□□□ -1.4
CUBN-202ENST00000377833 TIMM10P62072 90 aa6.3□□□□□ -1.4
CUBN-202ENST00000377833 NFE2Q16621 373 aaPredicted RBP6.3□□□□□ -1.4
CUBN-202ENST00000377833 DNAJB7Q7Z6W7 309 aaPredicted RBP6.3□□□□□ -1.4
CUBN-202ENST00000377833 LCORLQ8N3X6 602 aa6.3□□□□□ -1.4
CUBN-202ENST00000377833 SPATA33Q96N06 139 aa6.3□□□□□ -1.4
CUBN-202ENST00000377833 RMND5AQ9H871 391 aa6.3□□□□□ -1.4
CUBN-202ENST00000377833 LY9Q9HBG7 655 aa6.3□□□□□ -1.4
CUBN-202ENST00000377833 SESN1Q9Y6P5 492 aa6.3□□□□□ -1.4
CUBN-202ENST00000377833 LRRC53A6NM62 1247 aa6.3□□□□□ -1.4
CUBN-202ENST00000377833 RBP1P09455 135 aa6.3□□□□□ -1.4
CUBN-202ENST00000377833 MESDQ14696 234 aa6.3□□□□□ -1.4
CUBN-202ENST00000377833 KIF19Q2TAC6 998 aa6.3□□□□□ -1.4
CUBN-202ENST00000377833 SCYL2Q6P3W7 929 aa6.3□□□□□ -1.4
CUBN-202ENST00000377833 TRMT1LQ7Z2T5 733 aaKnown RBP6.3□□□□□ -1.4
CUBN-202ENST00000377833 NKX2-3Q8TAU0 364 aa6.3□□□□□ -1.4
CUBN-202ENST00000377833 C1QTNF7Q9BXJ2 289 aa6.3□□□□□ -1.4
CUBN-202ENST00000377833 DBR1Q9UK59 544 aaKnown RBP6.3□□□□□ -1.4
CUBN-202ENST00000377833 MROH7Q68CQ1 1323 aa6.3□□□□□ -1.4
CUBN-202ENST00000377833 H3BQF6 201 aa6.3□□□□□ -1.4
CUBN-202ENST00000377833 TPI1P60174 286 aa6.3□□□□□ -1.4
CUBN-202ENST00000377833 RASGRP2Q7LDG7 609 aa6.3□□□□□ -1.4
CUBN-202ENST00000377833 ITIH5Q86UX2 942 aa6.3□□□□□ -1.4
CUBN-202ENST00000377833 STK40Q8N2I9 435 aa6.3□□□□□ -1.4
CUBN-202ENST00000377833 SLC35F6Q8N357 371 aa6.3□□□□□ -1.4
CUBN-202ENST00000377833 PCSK9Q8NBP7 692 aaKnown RBP6.3□□□□□ -1.4
CUBN-202ENST00000377833 DRG1Q9Y295 367 aaKnown RBP6.3□□□□□ -1.4
CUBN-202ENST00000377833 KBTBD13C9JR72 458 aa6.29□□□□□ -1.4
CUBN-202ENST00000377833 KPNA5O15131 536 aa6.29□□□□□ -1.4
CUBN-202ENST00000377833 SERPINB8P50452 374 aa6.29□□□□□ -1.4
CUBN-202ENST00000377833 TRMT5Q32P41 509 aaKnown RBP6.29□□□□□ -1.4
CUBN-202ENST00000377833 TRIM68Q6AZZ1 485 aa6.29□□□□□ -1.4
CUBN-202ENST00000377833 DACT3Q96B18 629 aaPredicted RBP6.29□□□□□ -1.4
CUBN-202ENST00000377833 MROH8Q9H579 483 aa6.29□□□□□ -1.4
CUBN-202ENST00000377833 ANTXR1Q9H6X2 564 aa6.29□□□□□ -1.4
CUBN-202ENST00000377833 SLC4A7Q9Y6M7 1214 aa6.29□□□□□ -1.4
CUBN-202ENST00000377833 MAST2Q6P0Q8 1798 aa6.29□□□□□ -1.4
CUBN-202ENST00000377833 YWHABP31946 246 aaKnown RBP6.29□□□□□ -1.4
CUBN-202ENST00000377833 ATXN3P54252 364 aaPredicted RBP6.29□□□□□ -1.4
CUBN-202ENST00000377833 NEK5Q6P3R8 708 aa6.29□□□□□ -1.4
CUBN-202ENST00000377833 LRRC6Q86X45 466 aa6.29□□□□□ -1.4
CUBN-202ENST00000377833 BBS7Q8IWZ6 715 aa6.29□□□□□ -1.4
CUBN-202ENST00000377833 ANKRD42Q8N9B4 389 aa6.29□□□□□ -1.4
CUBN-202ENST00000377833 ASIC4Q96FT7 647 aa6.29□□□□□ -1.4
CUBN-202ENST00000377833 ZDHHC15Q96MV8 337 aa6.29□□□□□ -1.4
CUBN-202ENST00000377833 RBAKQ9NYW8 714 aaPredicted RBP6.29□□□□□ -1.4
CUBN-202ENST00000377833 ECE2O60344 883 aa6.29□□□□□ -1.4
CUBN-202ENST00000377833 FXR1P51114 621 aaKnown RBP eCLIP6.29□□□□□ -1.4
CUBN-202ENST00000377833 AIF1P55008 147 aa6.29□□□□□ -1.4
CUBN-202ENST00000377833 COG2Q14746 738 aa6.29□□□□□ -1.4
CUBN-202ENST00000377833 NIPA1Q7RTP0 329 aa6.29□□□□□ -1.4
CUBN-202ENST00000377833 PARP9Q8IXQ6 854 aa6.29□□□□□ -1.4
CUBN-202ENST00000377833 KCNB2Q92953 911 aa6.29□□□□□ -1.4
CUBN-202ENST00000377833 MAN1B1Q9UKM7 699 aa6.29□□□□□ -1.4
CUBN-202ENST00000377833 TJP1Q07157 1748 aa6.29□□□□□ -1.4
CUBN-202ENST00000377833 TOM1L1O75674 476 aa6.29□□□□□ -1.4
CUBN-202ENST00000377833 DSG1Q02413 1049 aa6.29□□□□□ -1.4
CUBN-202ENST00000377833 SMARCB1Q12824 385 aa6.29□□□□□ -1.4
CUBN-202ENST00000377833 C16orf86Q6ZW13 317 aa6.29□□□□□ -1.4
CUBN-202ENST00000377833 HORMAD1Q86X24 394 aa6.29□□□□□ -1.4
CUBN-202ENST00000377833 PARD3BQ8TEW8 1205 aa6.29□□□□□ -1.4
CUBN-202ENST00000377833 DDI1Q8WTU0 396 aa6.29□□□□□ -1.4
CUBN-202ENST00000377833 LRRC39Q96DD0 335 aa6.29□□□□□ -1.4
CUBN-202ENST00000377833 ORAI2Q96SN7 254 aa6.29□□□□□ -1.4
CUBN-202ENST00000377833 DNAJC12Q9UKB3 198 aa6.29□□□□□ -1.4
CUBN-202ENST00000377833 TGM2P21980 687 aa6.29□□□□□ -1.4
CUBN-202ENST00000377833 CLCN6P51797 869 aa6.29□□□□□ -1.4
CUBN-202ENST00000377833 ITIH4Q14624 930 aa6.29□□□□□ -1.4
CUBN-202ENST00000377833 SYTL3Q4VX76 610 aa6.29□□□□□ -1.4
CUBN-202ENST00000377833 EAPPQ56P03 285 aaPredicted RBP6.29□□□□□ -1.4
CUBN-202ENST00000377833 NUGGCQ68CJ6 796 aa6.29□□□□□ -1.4
CUBN-202ENST00000377833 GDAP1Q8TB36 358 aa6.29□□□□□ -1.4
CUBN-202ENST00000377833 ZNF219Q9P2Y4 722 aaPredicted RBP6.29□□□□□ -1.4
CUBN-202ENST00000377833 LIMA1Q9UHB6 759 aaKnown RBP6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms