RNA–Protein interactions for RNA: ENST00000377808.8

SMARCE1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,307 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-203ENST00000377808 SLFN14P0C7P3 912 aa12.52□□□□□ -0.41
SMARCE1-203ENST00000377808 FSHRP23945 695 aa12.52□□□□□ -0.41
SMARCE1-203ENST00000377808 CMA1P23946 247 aa12.52□□□□□ -0.41
SMARCE1-203ENST00000377808 SYKP43405 635 aa12.52□□□□□ -0.41
SMARCE1-203ENST00000377808 LILRA4P59901 499 aa12.52□□□□□ -0.41
SMARCE1-203ENST00000377808 NTHL1P78549 312 aa12.52□□□□□ -0.41
SMARCE1-203ENST00000377808 OVOS1Q6IE37 1185 aa12.52□□□□□ -0.41
SMARCE1-203ENST00000377808 SLC8B1Q6J4K2 584 aa12.52□□□□□ -0.41
SMARCE1-203ENST00000377808 TRIM67Q6ZTA4 783 aa12.52□□□□□ -0.41
SMARCE1-203ENST00000377808 BRSK2Q8IWQ3 736 aa12.52□□□□□ -0.41
SMARCE1-203ENST00000377808 GPD1LQ8N335 351 aa12.52□□□□□ -0.41
SMARCE1-203ENST00000377808 SENP8Q96LD8 212 aa12.52□□□□□ -0.41
SMARCE1-203ENST00000377808 PGLYRP2Q96PD5 576 aa12.52□□□□□ -0.41
SMARCE1-203ENST00000377808 SCAND2PQ9GZW5 306 aaPredicted RBP12.52□□□□□ -0.41
SMARCE1-203ENST00000377808 SMOC2Q9H3U7 446 aa12.52□□□□□ -0.41
SMARCE1-203ENST00000377808 EXOC1Q9NV70 894 aa12.52□□□□□ -0.41
SMARCE1-203ENST00000377808 SORCS3Q9UPU3 1222 aa12.52□□□□□ -0.41
SMARCE1-203ENST00000377808 R3HCC1Q9Y3T6 440 aaKnown RBP12.52□□□□□ -0.41
SMARCE1-203ENST00000377808 DENND4AQ7Z401 1863 aa12.52□□□□□ -0.41
SMARCE1-203ENST00000377808 MTCL1Q9Y4B5 1905 aaKnown RBP12.52□□□□□ -0.41
SMARCE1-203ENST00000377808 UBE4BO95155 1302 aa12.51□□□□□ -0.41
SMARCE1-203ENST00000377808 M0QZQ0 153 aa12.51□□□□□ -0.41
SMARCE1-203ENST00000377808 EIF3DO15371 548 aaKnown RBP eCLIP12.51□□□□□ -0.41
SMARCE1-203ENST00000377808 ACTN4O43707 911 aaKnown RBP12.51□□□□□ -0.41
SMARCE1-203ENST00000377808 KRT19P08727 400 aa12.51□□□□□ -0.41
SMARCE1-203ENST00000377808 TMEM191BP0C7N4 346 aa12.51□□□□□ -0.41
SMARCE1-203ENST00000377808 TAF6P49848 677 aa12.51□□□□□ -0.41
SMARCE1-203ENST00000377808 CYP2J2P51589 502 aa12.51□□□□□ -0.41
SMARCE1-203ENST00000377808 ADCY1Q08828 1119 aa12.51□□□□□ -0.41
SMARCE1-203ENST00000377808 SIGLEC14Q08ET2 396 aa12.51□□□□□ -0.41
SMARCE1-203ENST00000377808 MRPL58Q14197 206 aaKnown RBP12.51□□□□□ -0.41
SMARCE1-203ENST00000377808 UVSSAQ2YD98 709 aa12.51□□□□□ -0.41
SMARCE1-203ENST00000377808 LMBRD2Q68DH5 695 aaPredicted RBP12.51□□□□□ -0.41
SMARCE1-203ENST00000377808 CNNM4Q6P4Q7 775 aa12.51□□□□□ -0.41
SMARCE1-203ENST00000377808 HFE2Q6ZVN8 426 aa12.51□□□□□ -0.41
SMARCE1-203ENST00000377808 HS2ST1Q7LGA3 356 aa12.51□□□□□ -0.41
SMARCE1-203ENST00000377808 METTL23Q86XA0 190 aa12.51□□□□□ -0.41
SMARCE1-203ENST00000377808 FSIP1Q8NA03 581 aa12.51□□□□□ -0.41
SMARCE1-203ENST00000377808 ST13P5Q8NFI4 369 aaPredicted RBP12.51□□□□□ -0.41
SMARCE1-203ENST00000377808 ZNF461Q8TAF7 563 aa12.51□□□□□ -0.41
SMARCE1-203ENST00000377808 CACTINQ8WUQ7 758 aaKnown RBP12.51□□□□□ -0.41
SMARCE1-203ENST00000377808 PAGE5Q96GU1 130 aa12.51□□□□□ -0.41
SMARCE1-203ENST00000377808 ZNF560Q96MR9 790 aa12.51□□□□□ -0.41
SMARCE1-203ENST00000377808 MYADMQ96S97 322 aa12.51□□□□□ -0.41
SMARCE1-203ENST00000377808 RHOBTB2Q9BYZ6 727 aa12.51□□□□□ -0.41
SMARCE1-203ENST00000377808 HCFC1R1Q9NWW0 138 aa12.51□□□□□ -0.41
SMARCE1-203ENST00000377808 HSPBP1Q9NZL4 362 aa12.51□□□□□ -0.41
SMARCE1-203ENST00000377808 PVALEFA0A1B0GWK0 134 aa12.5□□□□□ -0.41
SMARCE1-203ENST00000377808 ARHGEF37A1IGU5 675 aa12.5□□□□□ -0.41
SMARCE1-203ENST00000377808 PIRO00625 290 aa12.5□□□□□ -0.41
SMARCE1-203ENST00000377808 CYB561D2O14569 222 aa12.5□□□□□ -0.41
SMARCE1-203ENST00000377808 CLIC2O15247 247 aa12.5□□□□□ -0.41
SMARCE1-203ENST00000377808 SPTLC1O15269 473 aa12.5□□□□□ -0.41
SMARCE1-203ENST00000377808 N4BP1O75113 896 aaKnown RBP12.5□□□□□ -0.41
SMARCE1-203ENST00000377808 ITGB3P05106 788 aa12.5□□□□□ -0.41
SMARCE1-203ENST00000377808 POLR2BP30876 1174 aaKnown RBP12.5□□□□□ -0.41
SMARCE1-203ENST00000377808 HOXA9P31269 272 aa12.5□□□□□ -0.41
SMARCE1-203ENST00000377808 AARSP49588 968 aaKnown RBP eCLIP12.5□□□□□ -0.41
SMARCE1-203ENST00000377808 NDUFA8P51970 172 aa12.5□□□□□ -0.41
SMARCE1-203ENST00000377808 WNT7BP56706 349 aa12.5□□□□□ -0.41
SMARCE1-203ENST00000377808 POU5F1Q01860 360 aaKnown RBP12.5□□□□□ -0.41
SMARCE1-203ENST00000377808 BFSP1Q12934 665 aa12.5□□□□□ -0.41
SMARCE1-203ENST00000377808 SV2CQ496J9 727 aa12.5□□□□□ -0.41
SMARCE1-203ENST00000377808 PABPC1LQ4VXU2 614 aaKnown RBP12.5□□□□□ -0.41
SMARCE1-203ENST00000377808 RNF19BQ6ZMZ0 732 aa12.5□□□□□ -0.41
SMARCE1-203ENST00000377808 NT5DC4Q86YG4 428 aa12.5□□□□□ -0.41
SMARCE1-203ENST00000377808 UBALD2Q8IYN6 164 aa12.5□□□□□ -0.41
SMARCE1-203ENST00000377808 ELMOD1Q8N336 334 aa12.5□□□□□ -0.41
SMARCE1-203ENST00000377808 CSGALNACT2Q8N6G5 542 aa12.5□□□□□ -0.41
SMARCE1-203ENST00000377808 RDH13Q8NBN7 331 aa12.5□□□□□ -0.41
SMARCE1-203ENST00000377808 SCFD1Q8WVM8 642 aa12.5□□□□□ -0.41
SMARCE1-203ENST00000377808 PBXIP1Q96AQ6 731 aa12.5□□□□□ -0.41
SMARCE1-203ENST00000377808 FAM84AQ96KN4 292 aa12.5□□□□□ -0.41
SMARCE1-203ENST00000377808 MTMR12Q9C0I1 747 aa12.5□□□□□ -0.41
SMARCE1-203ENST00000377808 KCNK12Q9HB15 430 aa12.5□□□□□ -0.41
SMARCE1-203ENST00000377808 PDE11AQ9HCR9 933 aa12.5□□□□□ -0.41
SMARCE1-203ENST00000377808 AGPAT3Q9NRZ7 376 aa12.5□□□□□ -0.41
SMARCE1-203ENST00000377808 USP25Q9UHP3 1055 aa12.5□□□□□ -0.41
SMARCE1-203ENST00000377808 AGAP1Q9UPQ3 857 aa12.5□□□□□ -0.41
SMARCE1-203ENST00000377808 ANK1P16157 1881 aa12.5□□□□□ -0.41
SMARCE1-203ENST00000377808 ANO9A1A5B4 782 aa12.49□□□□□ -0.41
SMARCE1-203ENST00000377808 GOLGA6L4A6NEF3 574 aa12.49□□□□□ -0.41
SMARCE1-203ENST00000377808 ZNF233A6NK53 670 aa12.49□□□□□ -0.41
SMARCE1-203ENST00000377808 OR6C75A6NL08 312 aa12.49□□□□□ -0.41
SMARCE1-203ENST00000377808 KIAA0391O15091 583 aaKnown RBP12.49□□□□□ -0.41
SMARCE1-203ENST00000377808 TBC1D4O60343 1298 aa12.49□□□□□ -0.41
SMARCE1-203ENST00000377808 ABLIM3O94929 683 aa12.49□□□□□ -0.41
SMARCE1-203ENST00000377808 CLSTN1O94985 981 aa12.49□□□□□ -0.41
SMARCE1-203ENST00000377808 SEC24AO95486 1093 aa12.49□□□□□ -0.41
SMARCE1-203ENST00000377808 ATF2P15336 505 aa12.49□□□□□ -0.41
SMARCE1-203ENST00000377808 TYMPP19971 482 aa12.49□□□□□ -0.41
SMARCE1-203ENST00000377808 CDR1P51861 262 aa12.49□□□□□ -0.41
SMARCE1-203ENST00000377808 NUCB2P80303 420 aa12.49□□□□□ -0.41
SMARCE1-203ENST00000377808 TWF1Q12792 350 aa12.49□□□□□ -0.41
SMARCE1-203ENST00000377808 KMT5BQ4FZB7 885 aa12.49□□□□□ -0.41
SMARCE1-203ENST00000377808 TPGS2Q68CL5 300 aa12.49□□□□□ -0.41
SMARCE1-203ENST00000377808 EPM2AIP1Q7L775 607 aaPredicted RBP12.49□□□□□ -0.41
SMARCE1-203ENST00000377808 CBWD2Q8IUF1 395 aa12.49□□□□□ -0.41
SMARCE1-203ENST00000377808 SUGP1Q8IWZ8 645 aaKnown RBP12.49□□□□□ -0.41
SMARCE1-203ENST00000377808 ITFG1Q8TB96 612 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms