RNA–Protein interactions for RNA: ENST00000377344.6

CBWD3-203, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,813 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-203ENST00000377344 SLC4A7Q9Y6M7 1214 aa13.9□□□□□ -0.18
CBWD3-203ENST00000377344 LRRC53A6NM62 1247 aa13.9□□□□□ -0.18
CBWD3-203ENST00000377344 TBXAS1P24557 533 aaPredicted RBP13.9□□□□□ -0.18
CBWD3-203ENST00000377344 USP8P40818 1118 aa13.9□□□□□ -0.18
CBWD3-203ENST00000377344 MAGEA10P43363 369 aaPredicted RBP13.9□□□□□ -0.18
CBWD3-203ENST00000377344 GSDMDP57764 484 aa13.9□□□□□ -0.18
CBWD3-203ENST00000377344 GCNT1Q02742 428 aa13.9□□□□□ -0.18
CBWD3-203ENST00000377344 CUL2Q13617 745 aa13.9□□□□□ -0.18
CBWD3-203ENST00000377344 ARID5BQ14865 1188 aa13.9□□□□□ -0.18
CBWD3-203ENST00000377344 DRAP1Q14919 205 aaPredicted RBP13.9□□□□□ -0.18
CBWD3-203ENST00000377344 UPP1Q16831 310 aa13.9□□□□□ -0.18
CBWD3-203ENST00000377344 TSR1Q2NL82 804 aaKnown RBP13.9□□□□□ -0.18
CBWD3-203ENST00000377344 SV2CQ496J9 727 aa13.9□□□□□ -0.18
CBWD3-203ENST00000377344 HASPINQ8TF76 798 aa13.9□□□□□ -0.18
CBWD3-203ENST00000377344 RSPH1Q8WYR4 309 aa13.9□□□□□ -0.18
CBWD3-203ENST00000377344 HERVK_113Q902F9 699 aa13.9□□□□□ -0.18
CBWD3-203ENST00000377344 YME1L1Q96TA2 773 aa13.9□□□□□ -0.18
CBWD3-203ENST00000377344 NAA15Q9BXJ9 866 aaKnown RBP13.9□□□□□ -0.18
CBWD3-203ENST00000377344 EDEM3Q9BZQ6 932 aa13.9□□□□□ -0.18
CBWD3-203ENST00000377344 HCSTQ9UBK5 93 aa13.9□□□□□ -0.18
CBWD3-203ENST00000377344 KPNA7A9QM74 516 aa13.89□□□□□ -0.19
CBWD3-203ENST00000377344 B4GALT3O60512 393 aa13.89□□□□□ -0.19
CBWD3-203ENST00000377344 B3GAT3O94766 335 aa13.89□□□□□ -0.19
CBWD3-203ENST00000377344 CD58P19256 250 aa13.89□□□□□ -0.19
CBWD3-203ENST00000377344 LILRA4P59901 499 aa13.89□□□□□ -0.19
CBWD3-203ENST00000377344 DSC1Q08554 894 aa13.89□□□□□ -0.19
CBWD3-203ENST00000377344 SPOUT1Q5T280 376 aaKnown RBP13.89□□□□□ -0.19
CBWD3-203ENST00000377344 COLGALT2Q8IYK4 626 aa13.89□□□□□ -0.19
CBWD3-203ENST00000377344 TC2NQ8N9U0 490 aa13.89□□□□□ -0.19
CBWD3-203ENST00000377344 BAP1Q92560 729 aa13.89□□□□□ -0.19
CBWD3-203ENST00000377344 FAM81BQ96LP2 452 aa13.89□□□□□ -0.19
CBWD3-203ENST00000377344 KREMEN1Q96MU8 473 aa13.89□□□□□ -0.19
CBWD3-203ENST00000377344 STK33Q9BYT3 514 aa13.89□□□□□ -0.19
CBWD3-203ENST00000377344 NRDE2Q9H7Z3 1164 aa13.89□□□□□ -0.19
CBWD3-203ENST00000377344 PRG3Q9Y2Y8 225 aaPredicted RBP13.89□□□□□ -0.19
CBWD3-203ENST00000377344 DAAM1Q9Y4D1 1078 aa13.89□□□□□ -0.19
CBWD3-203ENST00000377344 SPTLC1O15269 473 aa13.88□□□□□ -0.19
CBWD3-203ENST00000377344 STAU1O95793 577 aaKnown RBP13.88□□□□□ -0.19
CBWD3-203ENST00000377344 WEE2P0C1S8 567 aa13.88□□□□□ -0.19
CBWD3-203ENST00000377344 PNMA6AP0CW24 399 aaPredicted RBP13.88□□□□□ -0.19
CBWD3-203ENST00000377344 IGFBP6P24592 240 aaPredicted RBP13.88□□□□□ -0.19
CBWD3-203ENST00000377344 DEKP35659 375 aaKnown RBP13.88□□□□□ -0.19
CBWD3-203ENST00000377344 ASPAP45381 313 aa13.88□□□□□ -0.19
CBWD3-203ENST00000377344 ARID5AQ03989 594 aa13.88□□□□□ -0.19
CBWD3-203ENST00000377344 BTG3Q14201 252 aaPredicted RBP13.88□□□□□ -0.19
CBWD3-203ENST00000377344 PDXDC1Q6P996 788 aa13.88□□□□□ -0.19
CBWD3-203ENST00000377344 ENOSF1Q7L5Y1 443 aa13.88□□□□□ -0.19
CBWD3-203ENST00000377344 C3orf58Q8NDZ4 430 aa13.88□□□□□ -0.19
CBWD3-203ENST00000377344 OR8K1Q8NGG5 319 aa13.88□□□□□ -0.19
CBWD3-203ENST00000377344 VRTNQ9H8Y1 702 aa13.88□□□□□ -0.19
CBWD3-203ENST00000377344 ABHD10Q9NUJ1 306 aa13.88□□□□□ -0.19
CBWD3-203ENST00000377344 FNDC1Q4ZHG4 1894 aaPredicted RBP13.88□□□□□ -0.19
CBWD3-203ENST00000377344 F8VZ95 297 aa13.87□□□□□ -0.19
CBWD3-203ENST00000377344 F8W810 466 aa13.87□□□□□ -0.19
CBWD3-203ENST00000377344 FOXN3O00409 490 aaPredicted RBP13.87□□□□□ -0.19
CBWD3-203ENST00000377344 ALDH2P05091 517 aa13.87□□□□□ -0.19
CBWD3-203ENST00000377344 KRT5P13647 590 aa13.87□□□□□ -0.19
CBWD3-203ENST00000377344 ATP2A2P16615 1042 aaKnown RBP13.87□□□□□ -0.19
CBWD3-203ENST00000377344 STAT1P42224 750 aa13.87□□□□□ -0.19
CBWD3-203ENST00000377344 RAP1GAPP47736 663 aa13.87□□□□□ -0.19
CBWD3-203ENST00000377344 JAM2P57087 298 aa13.87□□□□□ -0.19
CBWD3-203ENST00000377344 SFMBT2Q5VUG0 894 aa13.87□□□□□ -0.19
CBWD3-203ENST00000377344 DCLRE1AQ6PJP8 1040 aa13.87□□□□□ -0.19
CBWD3-203ENST00000377344 DSTYKQ6XUX3 929 aa13.87□□□□□ -0.19
CBWD3-203ENST00000377344 PIAS4Q8N2W9 510 aaPredicted RBP13.87□□□□□ -0.19
CBWD3-203ENST00000377344 ZNF689Q96CS4 500 aaPredicted RBP13.87□□□□□ -0.19
CBWD3-203ENST00000377344 NUCKS1Q9H1E3 243 aaKnown RBP13.87□□□□□ -0.19
CBWD3-203ENST00000377344 SMYD3Q9H7B4 428 aa13.87□□□□□ -0.19
CBWD3-203ENST00000377344 ZNHIT6Q9NWK9 470 aaKnown RBP13.87□□□□□ -0.19
CBWD3-203ENST00000377344 SCN1AP35498 2009 aa13.87□□□□□ -0.19
CBWD3-203ENST00000377344 NRP1O14786 923 aa13.87□□□□□ -0.19
CBWD3-203ENST00000377344 HUS1O60921 280 aa13.87□□□□□ -0.19
CBWD3-203ENST00000377344 GFPT2O94808 682 aa13.87□□□□□ -0.19
CBWD3-203ENST00000377344 KIF4AO95239 1232 aa13.87□□□□□ -0.19
CBWD3-203ENST00000377344 GJB5O95377 273 aa13.87□□□□□ -0.19
CBWD3-203ENST00000377344 PBX3P40426 434 aa13.87□□□□□ -0.19
CBWD3-203ENST00000377344 CDH8P55286 799 aa13.87□□□□□ -0.19
CBWD3-203ENST00000377344 C9orf50Q5SZB4 431 aa13.87□□□□□ -0.19
CBWD3-203ENST00000377344 SLC9A7Q96T83 725 aa13.87□□□□□ -0.19
CBWD3-203ENST00000377344 DNAJC7Q99615 494 aa13.87□□□□□ -0.19
CBWD3-203ENST00000377344 FAN1Q9Y2M0 1017 aa13.87□□□□□ -0.19
CBWD3-203ENST00000377344 PCDHB4Q9Y5E5 795 aa13.87□□□□□ -0.19
CBWD3-203ENST00000377344 NT5C1B-RDH14C9J2C7 533 aa13.86□□□□□ -0.19
CBWD3-203ENST00000377344 I3L4J1 428 aa13.86□□□□□ -0.19
CBWD3-203ENST00000377344 CYB561D2O14569 222 aa13.86□□□□□ -0.19
CBWD3-203ENST00000377344 TADA2AO75478 443 aa13.86□□□□□ -0.19
CBWD3-203ENST00000377344 ITGB1P05556 798 aa13.86□□□□□ -0.19
CBWD3-203ENST00000377344 SOX5P35711 763 aa13.86□□□□□ -0.19
CBWD3-203ENST00000377344 BRCC3P46736 316 aa13.86□□□□□ -0.19
CBWD3-203ENST00000377344 SLC11A1P49279 550 aa13.86□□□□□ -0.19
CBWD3-203ENST00000377344 ALDH7A1P49419 539 aaKnown RBP13.86□□□□□ -0.19
CBWD3-203ENST00000377344 YWHAEP62258 255 aaKnown RBP13.86□□□□□ -0.19
CBWD3-203ENST00000377344 ASIC2Q16515 512 aa13.86□□□□□ -0.19
CBWD3-203ENST00000377344 ZNF394Q53GI3 561 aa13.86□□□□□ -0.19
CBWD3-203ENST00000377344 TMEM270Q6UE05 265 aa13.86□□□□□ -0.19
CBWD3-203ENST00000377344 HERC6Q8IVU3 1022 aa13.86□□□□□ -0.19
CBWD3-203ENST00000377344 CMTR2Q8IYT2 770 aaKnown RBP13.86□□□□□ -0.19
CBWD3-203ENST00000377344 APPL2Q8NEU8 664 aa13.86□□□□□ -0.19
CBWD3-203ENST00000377344 SHC3Q92529 594 aa13.86□□□□□ -0.19
CBWD3-203ENST00000377344 SENP8Q96LD8 212 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms