RNA–Protein interactions for RNA: ENST00000377340.6

CRNKL1-202, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene CRNKL1, Length 4,406 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-202ENST00000377340 ECM1Q16610 540 aa8.96□□□□□ -0.97
CRNKL1-202ENST00000377340 C10orf76Q5T2E6 689 aa8.96□□□□□ -0.97
CRNKL1-202ENST00000377340 C1orf131Q8NDD1 294 aaKnown RBP8.96□□□□□ -0.97
CRNKL1-202ENST00000377340 SPIRE2Q8WWL2 714 aa8.96□□□□□ -0.97
CRNKL1-202ENST00000377340 KLHL8Q9P2G9 620 aaPredicted RBP8.96□□□□□ -0.97
CRNKL1-202ENST00000377340 SART1O43290 800 aaKnown RBP8.96□□□□□ -0.97
CRNKL1-202ENST00000377340 FGGP02679 453 aa8.96□□□□□ -0.97
CRNKL1-202ENST00000377340 CYBBP04839 570 aa8.96□□□□□ -0.97
CRNKL1-202ENST00000377340 HSPA1AP0DMV8 641 aaKnown RBP8.96□□□□□ -0.97
CRNKL1-202ENST00000377340 HSPA1BP0DMV9 641 aaKnown RBP8.96□□□□□ -0.97
CRNKL1-202ENST00000377340 ATF2P15336 505 aa8.96□□□□□ -0.97
CRNKL1-202ENST00000377340 ARF4P18085 180 aaPredicted RBP8.96□□□□□ -0.97
CRNKL1-202ENST00000377340 PRMT2P55345 433 aa8.96□□□□□ -0.97
CRNKL1-202ENST00000377340 GUCY2DQ02846 1103 aa8.96□□□□□ -0.97
CRNKL1-202ENST00000377340 PRPSAP1Q14558 356 aa8.96□□□□□ -0.97
CRNKL1-202ENST00000377340 TMEM119Q4V9L6 283 aa8.96□□□□□ -0.97
CRNKL1-202ENST00000377340 MDH1BQ5I0G3 518 aa8.96□□□□□ -0.97
CRNKL1-202ENST00000377340 PDXDC1Q6P996 788 aa8.96□□□□□ -0.97
CRNKL1-202ENST00000377340 TRIM65Q6PJ69 517 aa8.96□□□□□ -0.97
CRNKL1-202ENST00000377340 DDX53Q86TM3 631 aaKnown RBP8.96□□□□□ -0.97
CRNKL1-202ENST00000377340 ZC3H18Q86VM9 953 aaKnown RBP8.96□□□□□ -0.97
CRNKL1-202ENST00000377340 FIBCD1Q8N539 461 aa8.96□□□□□ -0.97
CRNKL1-202ENST00000377340 MRPS31Q92665 395 aaKnown RBP8.96□□□□□ -0.97
CRNKL1-202ENST00000377340 FBXO32Q969P5 355 aa8.96□□□□□ -0.97
CRNKL1-202ENST00000377340 PPP1R13BQ96KQ4 1090 aa8.96□□□□□ -0.97
CRNKL1-202ENST00000377340 ZFP42Q96MM3 310 aa8.96□□□□□ -0.97
CRNKL1-202ENST00000377340 FAM161BQ96MY7 647 aa8.96□□□□□ -0.97
CRNKL1-202ENST00000377340 TSPYL2Q9H2G4 693 aaPredicted RBP8.96□□□□□ -0.97
CRNKL1-202ENST00000377340 LIMA1Q9UHB6 759 aaKnown RBP8.96□□□□□ -0.97
CRNKL1-202ENST00000377340 MROH7Q68CQ1 1323 aa8.96□□□□□ -0.98
CRNKL1-202ENST00000377340 EFCAB8A8MWE9 144 aa8.96□□□□□ -0.98
CRNKL1-202ENST00000377340 SULT1E1P49888 294 aa8.96□□□□□ -0.98
CRNKL1-202ENST00000377340 MAP3K7CLP57077 242 aa8.96□□□□□ -0.98
CRNKL1-202ENST00000377340 APBA1Q02410 837 aa8.96□□□□□ -0.98
CRNKL1-202ENST00000377340 TTI2Q6NXR4 508 aa8.96□□□□□ -0.98
CRNKL1-202ENST00000377340 ZPBP2Q6X784 338 aa8.96□□□□□ -0.98
CRNKL1-202ENST00000377340 RUFY4Q6ZNE9 571 aa8.96□□□□□ -0.98
CRNKL1-202ENST00000377340 CD302Q8IX05 232 aa8.96□□□□□ -0.98
CRNKL1-202ENST00000377340 TSC1Q92574 1164 aa8.96□□□□□ -0.98
CRNKL1-202ENST00000377340 MCEEQ96PE7 176 aa8.96□□□□□ -0.98
CRNKL1-202ENST00000377340 NXF3Q9H4D5 531 aaKnown RBP8.96□□□□□ -0.98
CRNKL1-202ENST00000377340 ABCF3Q9NUQ8 709 aa8.96□□□□□ -0.98
CRNKL1-202ENST00000377340 INTS13Q9NVM9 706 aa8.96□□□□□ -0.98
CRNKL1-202ENST00000377340 NUDT5Q9UKK9 219 aa8.96□□□□□ -0.98
CRNKL1-202ENST00000377340 TNFSF9P41273 254 aa8.96□□□□□ -0.98
CRNKL1-202ENST00000377340 C1QTNF8P60827 252 aa8.96□□□□□ -0.98
CRNKL1-202ENST00000377340 CBX1P83916 185 aa8.96□□□□□ -0.98
CRNKL1-202ENST00000377340 TRIM32Q13049 653 aa8.96□□□□□ -0.98
CRNKL1-202ENST00000377340 DRP2Q13474 957 aa8.96□□□□□ -0.98
CRNKL1-202ENST00000377340 ELF2Q15723 593 aa8.96□□□□□ -0.98
CRNKL1-202ENST00000377340 CENPPQ6IPU0 288 aa8.96□□□□□ -0.98
CRNKL1-202ENST00000377340 CLEC17AQ6ZS10 378 aa8.96□□□□□ -0.98
CRNKL1-202ENST00000377340 STKLD1Q8NE28 680 aa8.96□□□□□ -0.98
CRNKL1-202ENST00000377340 PARD3BQ8TEW8 1205 aa8.96□□□□□ -0.98
CRNKL1-202ENST00000377340 DDX27Q96GQ7 796 aaKnown RBP8.96□□□□□ -0.98
CRNKL1-202ENST00000377340 TTC25Q96NG3 672 aa8.96□□□□□ -0.98
CRNKL1-202ENST00000377340 NCAPGQ9BPX3 1015 aa8.96□□□□□ -0.98
CRNKL1-202ENST00000377340 RAB17Q9H0T7 212 aa8.96□□□□□ -0.98
CRNKL1-202ENST00000377340 UBN1Q9NPG3 1134 aa8.96□□□□□ -0.98
CRNKL1-202ENST00000377340 CISHQ9NSE2 258 aa8.96□□□□□ -0.98
CRNKL1-202ENST00000377340 ANAPC5Q9UJX4 755 aa8.96□□□□□ -0.98
CRNKL1-202ENST00000377340 GTF3C4Q9UKN8 822 aa8.96□□□□□ -0.98
CRNKL1-202ENST00000377340 DIS3Q9Y2L1 958 aaKnown RBP8.96□□□□□ -0.98
CRNKL1-202ENST00000377340 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.95□□□□□ -0.98
CRNKL1-202ENST00000377340 KIAA0754O94854 1291 aa8.95□□□□□ -0.98
CRNKL1-202ENST00000377340 FGBP02675 491 aa8.95□□□□□ -0.98
CRNKL1-202ENST00000377340 SPATA31D3P0C874 917 aa8.95□□□□□ -0.98
CRNKL1-202ENST00000377340 PTENP60484 403 aa8.95□□□□□ -0.98
CRNKL1-202ENST00000377340 TDRD10Q5VZ19 366 aaKnown RBP8.95□□□□□ -0.98
CRNKL1-202ENST00000377340 SPATA31D4Q6ZUB0 917 aa8.95□□□□□ -0.98
CRNKL1-202ENST00000377340 CGRRF1Q99675 332 aa8.95□□□□□ -0.98
CRNKL1-202ENST00000377340 DFFAO00273 331 aa8.95□□□□□ -0.98
CRNKL1-202ENST00000377340 ATP2C2O75185 946 aa8.95□□□□□ -0.98
CRNKL1-202ENST00000377340 SELPP16109 830 aa8.95□□□□□ -0.98
CRNKL1-202ENST00000377340 HSPA6P17066 643 aa8.95□□□□□ -0.98
CRNKL1-202ENST00000377340 AVPR1AP37288 418 aa8.95□□□□□ -0.98
CRNKL1-202ENST00000377340 CRYBB1P53674 252 aaPredicted RBP8.95□□□□□ -0.98
CRNKL1-202ENST00000377340 GALCP54803 685 aa8.95□□□□□ -0.98
CRNKL1-202ENST00000377340 PLTPP55058 493 aa8.95□□□□□ -0.98
CRNKL1-202ENST00000377340 DEUP1Q05D60 604 aa8.95□□□□□ -0.98
CRNKL1-202ENST00000377340 ELAVL2Q12926 359 aaKnown RBP8.95□□□□□ -0.98
CRNKL1-202ENST00000377340 SNX17Q15036 470 aa8.95□□□□□ -0.98
CRNKL1-202ENST00000377340 MTFR1Q15390 333 aa8.95□□□□□ -0.98
CRNKL1-202ENST00000377340 MAPRE1Q15691 268 aaKnown RBP8.95□□□□□ -0.98
CRNKL1-202ENST00000377340 TMEM63BQ5T3F8 832 aa8.95□□□□□ -0.98
CRNKL1-202ENST00000377340 KLHDC7AQ5VTJ3 777 aa8.95□□□□□ -0.98
CRNKL1-202ENST00000377340 MTERF4Q7Z6M4 381 aaKnown RBP8.95□□□□□ -0.98
CRNKL1-202ENST00000377340 CHSY1Q86X52 802 aa8.95□□□□□ -0.98
CRNKL1-202ENST00000377340 DNAAF5Q86Y56 855 aa8.95□□□□□ -0.98
CRNKL1-202ENST00000377340 GIPC2Q8TF65 315 aa8.95□□□□□ -0.98
CRNKL1-202ENST00000377340 ATRIPQ8WXE1 791 aa8.95□□□□□ -0.98
CRNKL1-202ENST00000377340 BPIFA3Q9BQP9 254 aa8.95□□□□□ -0.98
CRNKL1-202ENST00000377340 CDT1Q9H211 546 aa8.95□□□□□ -0.98
CRNKL1-202ENST00000377340 DDIT4Q9NX09 232 aa8.95□□□□□ -0.98
CRNKL1-202ENST00000377340 TTC7AQ9ULT0 858 aaPredicted RBP8.95□□□□□ -0.98
CRNKL1-202ENST00000377340 ZNF536O15090 1300 aa8.95□□□□□ -0.98
CRNKL1-202ENST00000377340 ERICH4A6NGS2 130 aa8.95□□□□□ -0.98
CRNKL1-202ENST00000377340 PGRMC1O00264 195 aaKnown RBP8.95□□□□□ -0.98
CRNKL1-202ENST00000377340 NCK2O43639 380 aa8.95□□□□□ -0.98
CRNKL1-202ENST00000377340 SNRPFP62306 86 aaKnown RBP8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms