RNA–Protein interactions for RNA: ENST00000377199.3

TRIM27-202, Transcript of tripartite motif containing 27, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM27, Length 2,967 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-202ENST00000377199 TMEM174Q8WUU8 243 aa17.25■□□□□ 0.35
TRIM27-202ENST00000377199 MCEEQ96PE7 176 aa17.25■□□□□ 0.35
TRIM27-202ENST00000377199 ACTR5Q9H9F9 607 aaPredicted RBP17.25■□□□□ 0.35
TRIM27-202ENST00000377199 POC1B-GALNT4F8VUJ3 575 aa17.25■□□□□ 0.35
TRIM27-202ENST00000377199 POTEJP0CG39 1038 aa17.25■□□□□ 0.35
TRIM27-202ENST00000377199 SRGAP2CP0DJJ0 459 aa17.25■□□□□ 0.35
TRIM27-202ENST00000377199 FDX1P10109 184 aa17.25■□□□□ 0.35
TRIM27-202ENST00000377199 BRD2P25440 801 aaKnown RBP17.25■□□□□ 0.35
TRIM27-202ENST00000377199 CENPCQ03188 943 aa17.25■□□□□ 0.35
TRIM27-202ENST00000377199 NCOA4Q13772 614 aa17.25■□□□□ 0.35
TRIM27-202ENST00000377199 MPP2Q14168 576 aa17.25■□□□□ 0.35
TRIM27-202ENST00000377199 GNPTABQ3T906 1256 aa17.25■□□□□ 0.35
TRIM27-202ENST00000377199 XKR3Q5GH77 459 aa17.25■□□□□ 0.35
TRIM27-202ENST00000377199 CYP4A22Q5TCH4 519 aa17.25■□□□□ 0.35
TRIM27-202ENST00000377199 SUGP1Q8IWZ8 645 aaKnown RBP17.25■□□□□ 0.35
TRIM27-202ENST00000377199 FUKQ8N0W3 1084 aa17.25■□□□□ 0.35
TRIM27-202ENST00000377199 GRK7Q8WTQ7 553 aa17.25■□□□□ 0.35
TRIM27-202ENST00000377199 TRAIPQ9BWF2 469 aa17.25■□□□□ 0.35
TRIM27-202ENST00000377199 C17orf75Q9HAS0 396 aa17.25■□□□□ 0.35
TRIM27-202ENST00000377199 SAE1Q9UBE0 346 aaPredicted RBP17.25■□□□□ 0.35
TRIM27-202ENST00000377199 LOXHD1Q8IVV2 1947 aa17.24■□□□□ 0.35
TRIM27-202ENST00000377199 F8VP50 259 aa17.24■□□□□ 0.35
TRIM27-202ENST00000377199 SPAG7O75391 227 aa17.24■□□□□ 0.35
TRIM27-202ENST00000377199 ZBTB7AO95365 584 aa17.24■□□□□ 0.35
TRIM27-202ENST00000377199 CLTAP09496 248 aa17.24■□□□□ 0.35
TRIM27-202ENST00000377199 WEE2P0C1S8 567 aa17.24■□□□□ 0.35
TRIM27-202ENST00000377199 PTPRAP18433 802 aa17.24■□□□□ 0.35
TRIM27-202ENST00000377199 ORC1Q13415 861 aa17.24■□□□□ 0.35
TRIM27-202ENST00000377199 PSMD6Q15008 389 aa17.24■□□□□ 0.35
TRIM27-202ENST00000377199 TXNRD3NBQ6F5E7 133 aa17.24■□□□□ 0.35
TRIM27-202ENST00000377199 DCUN1D2Q6PH85 259 aa17.24■□□□□ 0.35
TRIM27-202ENST00000377199 FAM47EQ6ZV65 393 aa17.24■□□□□ 0.35
TRIM27-202ENST00000377199 ABRAQ8N0Z2 381 aa17.24■□□□□ 0.35
TRIM27-202ENST00000377199 C3orf20Q8ND61 904 aa17.24■□□□□ 0.35
TRIM27-202ENST00000377199 CENPTQ96BT3 561 aa17.24■□□□□ 0.35
TRIM27-202ENST00000377199 TBC1D31Q96DN5 1066 aa17.24■□□□□ 0.35
TRIM27-202ENST00000377199 MAP3K20Q9NYL2 800 aaKnown RBP17.24■□□□□ 0.35
TRIM27-202ENST00000377199 GGA2Q9UJY4 613 aa17.24■□□□□ 0.35
TRIM27-202ENST00000377199 DNPEPQ9ULA0 475 aa17.24■□□□□ 0.35
TRIM27-202ENST00000377199 KRT1P04264 644 aa17.24■□□□□ 0.35
TRIM27-202ENST00000377199 SUPT20HL2P0C7V6 817 aa17.24■□□□□ 0.35
TRIM27-202ENST00000377199 ACO1P21399 889 aaKnown RBP17.24■□□□□ 0.35
TRIM27-202ENST00000377199 GHRHRQ02643 423 aa17.24■□□□□ 0.35
TRIM27-202ENST00000377199 PTK6Q13882 451 aa17.24■□□□□ 0.35
TRIM27-202ENST00000377199 SMTNL2Q2TAL5 461 aa17.24■□□□□ 0.35
TRIM27-202ENST00000377199 SUPT20HL1Q3ZLR7 823 aa17.24■□□□□ 0.35
TRIM27-202ENST00000377199 ZNF772Q68DY9 489 aaPredicted RBP17.24■□□□□ 0.35
TRIM27-202ENST00000377199 VSTM1Q6UX27 236 aa17.24■□□□□ 0.35
TRIM27-202ENST00000377199 RBM15Q96T37 977 aaKnown RBP eCLIP17.24■□□□□ 0.352e-7■□□□□ 9.6
TRIM27-202ENST00000377199 MTMR12Q9C0I1 747 aa17.24■□□□□ 0.35
TRIM27-202ENST00000377199 BAIAP2L1Q9UHR4 511 aa17.24■□□□□ 0.35
TRIM27-202ENST00000377199 RASSF9O75901 435 aa17.23■□□□□ 0.35
TRIM27-202ENST00000377199 CYP1A1P04798 512 aaPredicted RBP17.23■□□□□ 0.35
TRIM27-202ENST00000377199 STX2P32856 288 aa17.23■□□□□ 0.35
TRIM27-202ENST00000377199 RDXP35241 583 aaKnown RBP17.23■□□□□ 0.35
TRIM27-202ENST00000377199 SLC1A1P43005 524 aa17.23■□□□□ 0.35
TRIM27-202ENST00000377199 BPIFB4P59827 614 aa17.23■□□□□ 0.35
TRIM27-202ENST00000377199 ANGEL2Q5VTE6 544 aaKnown RBP17.23■□□□□ 0.35
TRIM27-202ENST00000377199 C15orf39Q6ZRI6 1047 aa17.23■□□□□ 0.35
TRIM27-202ENST00000377199 GPATCH11Q8N954 259 aa17.23■□□□□ 0.35
TRIM27-202ENST00000377199 ACAD9Q9H845 621 aa17.23■□□□□ 0.35
TRIM27-202ENST00000377199 SAYSD1Q9NPB0 183 aa17.23■□□□□ 0.35
TRIM27-202ENST00000377199 PDLIM7Q9NR12 457 aa17.23■□□□□ 0.35
TRIM27-202ENST00000377199 DKC1O60832 514 aaKnown RBP eCLIP17.23■□□□□ 0.35
TRIM27-202ENST00000377199 BANF1O75531 89 aa17.23■□□□□ 0.35
TRIM27-202ENST00000377199 FASTKD3Q14CZ7 662 aaKnown RBP17.23■□□□□ 0.35
TRIM27-202ENST00000377199 TMEM132AQ24JP5 1023 aa17.23■□□□□ 0.35
TRIM27-202ENST00000377199 RHBDF2Q6PJF5 856 aa17.23■□□□□ 0.35
TRIM27-202ENST00000377199 SCYL3Q8IZE3 742 aa17.23■□□□□ 0.35
TRIM27-202ENST00000377199 ZBTB10Q96DT7 871 aa17.23■□□□□ 0.35
TRIM27-202ENST00000377199 TEX13BQ9BXU2 312 aa17.23■□□□□ 0.35
TRIM27-202ENST00000377199 IMPG2Q9BZV3 1241 aa17.23■□□□□ 0.35
TRIM27-202ENST00000377199 IVNS1ABPQ9Y6Y0 642 aa17.23■□□□□ 0.35
TRIM27-202ENST00000377199 OATP04181 439 aa17.22■□□□□ 0.35
TRIM27-202ENST00000377199 MFSD7Q6UXD7 560 aa17.22■□□□□ 0.35
TRIM27-202ENST00000377199 TRPM8Q7Z2W7 1104 aa17.22■□□□□ 0.35
TRIM27-202ENST00000377199 PARP9Q8IXQ6 854 aa17.22■□□□□ 0.35
TRIM27-202ENST00000377199 ZNF606Q8WXB4 792 aa17.22■□□□□ 0.35
TRIM27-202ENST00000377199 TRIM11Q96F44 468 aa17.22■□□□□ 0.35
TRIM27-202ENST00000377199 FAM81BQ96LP2 452 aa17.22■□□□□ 0.35
TRIM27-202ENST00000377199 NSRP1Q9H0G5 558 aaKnown RBP17.22■□□□□ 0.35
TRIM27-202ENST00000377199 KIF9Q9HAQ2 790 aa17.22■□□□□ 0.35
TRIM27-202ENST00000377199 MRPL47Q9HD33 250 aaKnown RBP17.22■□□□□ 0.35
TRIM27-202ENST00000377199 AVENQ9NQS1 362 aaPredicted RBP17.22■□□□□ 0.35
TRIM27-202ENST00000377199 NAALADL1Q9UQQ1 740 aa17.22■□□□□ 0.35
TRIM27-202ENST00000377199 TFAMQ00059 246 aaKnown RBP17.22■□□□□ 0.35
TRIM27-202ENST00000377199 NFX1Q12986 1120 aaKnown RBP17.22■□□□□ 0.35
TRIM27-202ENST00000377199 KCNT1Q5JUK3 1230 aa17.22■□□□□ 0.35
TRIM27-202ENST00000377199 DPH6Q7L8W6 267 aa17.22■□□□□ 0.35
TRIM27-202ENST00000377199 TRIM50Q86XT4 487 aa17.22■□□□□ 0.35
TRIM27-202ENST00000377199 LRRC71Q8N4P6 559 aa17.22■□□□□ 0.35
TRIM27-202ENST00000377199 RDM1Q8NG50 284 aa17.22■□□□□ 0.35
TRIM27-202ENST00000377199 PIM2Q9P1W9 311 aa17.22■□□□□ 0.35
TRIM27-202ENST00000377199 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.22■□□□□ 0.35
TRIM27-202ENST00000377199 LRRD1A4D1F6 860 aa17.22■□□□□ 0.35
TRIM27-202ENST00000377199 MYBL1P10243 752 aa17.22■□□□□ 0.35
TRIM27-202ENST00000377199 KIF2BQ8N4N8 673 aa17.22■□□□□ 0.35
TRIM27-202ENST00000377199 CCDC89Q8N998 374 aa17.22■□□□□ 0.35
TRIM27-202ENST00000377199 TGS1Q96RS0 853 aaKnown RBP17.22■□□□□ 0.35
TRIM27-202ENST00000377199 PPP1R16BQ96T49 567 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 1048.2 ms