RNA–Protein interactions for RNA: ENST00000377011.6

VRK3-202, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,749 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-202ENST00000377011 SLC20A2Q08357 652 aa13.35□□□□□ -0.27
VRK3-202ENST00000377011 CASP8Q14790 479 aa13.35□□□□□ -0.27
VRK3-202ENST00000377011 CCDC70Q6NSX1 233 aa13.35□□□□□ -0.27
VRK3-202ENST00000377011 GLB1LQ6UWU2 654 aa13.35□□□□□ -0.27
VRK3-202ENST00000377011 ZBTB33Q86T24 672 aa13.35□□□□□ -0.27
VRK3-202ENST00000377011 RBM23Q86U06 439 aaKnown RBP13.35□□□□□ -0.27
VRK3-202ENST00000377011 THNSL1Q8IYQ7 743 aa13.35□□□□□ -0.27
VRK3-202ENST00000377011 NOA1Q8NC60 698 aaKnown RBP13.35□□□□□ -0.27
VRK3-202ENST00000377011 GOLGA5Q8TBA6 731 aa13.35□□□□□ -0.27
VRK3-202ENST00000377011 AUTS2Q8WXX7 1259 aa13.35□□□□□ -0.27
VRK3-202ENST00000377011 SECISBP2LQ93073 1101 aaKnown RBP13.35□□□□□ -0.27
VRK3-202ENST00000377011 CCDC42Q96M95 316 aa13.35□□□□□ -0.27
VRK3-202ENST00000377011 PCMTD1Q96MG8 357 aaPredicted RBP13.35□□□□□ -0.27
VRK3-202ENST00000377011 ACO2Q99798 780 aaKnown RBP13.35□□□□□ -0.27
VRK3-202ENST00000377011 NTPCRQ9BSD7 190 aaKnown RBP13.35□□□□□ -0.27
VRK3-202ENST00000377011 C2orf40Q9H1Z8 148 aa13.35□□□□□ -0.27
VRK3-202ENST00000377011 NDST4Q9H3R1 872 aa13.35□□□□□ -0.27
VRK3-202ENST00000377011 MARCH5Q9NX47 278 aa13.35□□□□□ -0.27
VRK3-202ENST00000377011 ADAM21Q9UKJ8 722 aa13.35□□□□□ -0.27
VRK3-202ENST00000377011 JRKLQ9Y4A0 524 aa13.35□□□□□ -0.27
VRK3-202ENST00000377011 H3BQF6 201 aa13.34□□□□□ -0.27
VRK3-202ENST00000377011 K7ERI5 159 aa13.34□□□□□ -0.27
VRK3-202ENST00000377011 PTGESO14684 152 aa13.34□□□□□ -0.27
VRK3-202ENST00000377011 HOXA2O43364 376 aa13.34□□□□□ -0.27
VRK3-202ENST00000377011 TACC1O75410 805 aa13.34□□□□□ -0.27
VRK3-202ENST00000377011 ATP1A1P05023 1023 aaKnown RBP13.34□□□□□ -0.27
VRK3-202ENST00000377011 RHOXF2BP0C7M4 288 aa13.34□□□□□ -0.27
VRK3-202ENST00000377011 MAPTP10636 758 aaKnown RBP13.34□□□□□ -0.27
VRK3-202ENST00000377011 LAG3P18627 525 aa13.34□□□□□ -0.27
VRK3-202ENST00000377011 LTBRP36941 435 aa13.34□□□□□ -0.27
VRK3-202ENST00000377011 AARSP49588 968 aaKnown RBP eCLIP13.34□□□□□ -0.27
VRK3-202ENST00000377011 ZNF131P52739 623 aa13.34□□□□□ -0.27
VRK3-202ENST00000377011 OSTNP61366 133 aa13.34□□□□□ -0.27
VRK3-202ENST00000377011 DMP1Q13316 513 aaPredicted RBP13.34□□□□□ -0.27
VRK3-202ENST00000377011 PPP2R5AQ15172 486 aa13.34□□□□□ -0.27
VRK3-202ENST00000377011 ZC2HC1CQ53FD0 456 aaPredicted RBP13.34□□□□□ -0.27
VRK3-202ENST00000377011 HSP90B2PQ58FF3 399 aa13.34□□□□□ -0.27
VRK3-202ENST00000377011 ATF7IP2Q5U623 682 aa13.34□□□□□ -0.27
VRK3-202ENST00000377011 TAS1R1Q7RTX1 841 aa13.34□□□□□ -0.27
VRK3-202ENST00000377011 VN1R2Q8NFZ6 395 aa13.34□□□□□ -0.27
VRK3-202ENST00000377011 SYN2Q92777 582 aaPredicted RBP13.34□□□□□ -0.27
VRK3-202ENST00000377011 DNAJC19Q96DA6 116 aa13.34□□□□□ -0.27
VRK3-202ENST00000377011 DRC1Q96MC2 740 aa13.34□□□□□ -0.27
VRK3-202ENST00000377011 ZNF558Q96NG5 402 aa13.34□□□□□ -0.27
VRK3-202ENST00000377011 NECAB3Q96P71 396 aaPredicted RBP13.34□□□□□ -0.27
VRK3-202ENST00000377011 RHOXF2Q9BQY4 288 aa13.34□□□□□ -0.27
VRK3-202ENST00000377011 CDT1Q9H211 546 aa13.34□□□□□ -0.27
VRK3-202ENST00000377011 IGFLR1Q9H665 355 aa13.34□□□□□ -0.27
VRK3-202ENST00000377011 PARP2Q9UGN5 583 aa13.34□□□□□ -0.27
VRK3-202ENST00000377011 NCOR1O75376 2440 aa13.34□□□□□ -0.27
VRK3-202ENST00000377011 SSU72P8A0A1W2PR75 194 aa13.33□□□□□ -0.27
VRK3-202ENST00000377011 H3BQ06 376 aaPredicted RBP13.33□□□□□ -0.27
VRK3-202ENST00000377011 FSCN2O14926 492 aa13.33□□□□□ -0.27
VRK3-202ENST00000377011 PJA2O43164 708 aa13.33□□□□□ -0.27
VRK3-202ENST00000377011 RECQL4O94761 1208 aa13.33□□□□□ -0.27
VRK3-202ENST00000377011 GNA14O95837 355 aa13.33□□□□□ -0.27
VRK3-202ENST00000377011 NCKAP1LP55160 1127 aa13.33□□□□□ -0.27
VRK3-202ENST00000377011 KCNA1Q09470 495 aa13.33□□□□□ -0.27
VRK3-202ENST00000377011 NAB2Q15742 525 aa13.33□□□□□ -0.27
VRK3-202ENST00000377011 ZBTB41Q5SVQ8 909 aa13.33□□□□□ -0.27
VRK3-202ENST00000377011 COLGALT2Q8IYK4 626 aa13.33□□□□□ -0.27
VRK3-202ENST00000377011 GLIS3Q8NEA6 775 aa13.33□□□□□ -0.27
VRK3-202ENST00000377011 HPS3Q969F9 1004 aa13.33□□□□□ -0.27
VRK3-202ENST00000377011 PGBD4Q96DM1 585 aa13.33□□□□□ -0.27
VRK3-202ENST00000377011 CEP63Q96MT8 703 aa13.33□□□□□ -0.27
VRK3-202ENST00000377011 NSUN3Q9H649 340 aaKnown RBP13.33□□□□□ -0.27
VRK3-202ENST00000377011 PDE11AQ9HCR9 933 aa13.33□□□□□ -0.27
VRK3-202ENST00000377011 TRIM10Q9UDY6 481 aa13.33□□□□□ -0.27
VRK3-202ENST00000377011 RWDD3Q9Y3V2 267 aa13.33□□□□□ -0.27
VRK3-202ENST00000377011 PCDHB12Q9Y5F1 795 aa13.33□□□□□ -0.27
VRK3-202ENST00000377011 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.33□□□□□ -0.28
VRK3-202ENST00000377011 INPPL1O15357 1258 aa13.33□□□□□ -0.28
VRK3-202ENST00000377011 GLP2RO95838 553 aa13.33□□□□□ -0.28
VRK3-202ENST00000377011 SKIP12755 728 aa13.33□□□□□ -0.28
VRK3-202ENST00000377011 PROZP22891 400 aa13.33□□□□□ -0.28
VRK3-202ENST00000377011 CASP5P51878 434 aa13.33□□□□□ -0.28
VRK3-202ENST00000377011 PLCB3Q01970 1234 aa13.33□□□□□ -0.28
VRK3-202ENST00000377011 PCBP1Q15365 356 aaKnown RBP eCLIP13.33□□□□□ -0.28
VRK3-202ENST00000377011 GLRA4Q5JXX5 417 aa13.33□□□□□ -0.28
VRK3-202ENST00000377011 PLPP4Q5VZY2 271 aa13.33□□□□□ -0.28
VRK3-202ENST00000377011 SLC39A4Q6P5W5 647 aa13.33□□□□□ -0.28
VRK3-202ENST00000377011 FAM43BQ6ZT52 329 aaPredicted RBP13.33□□□□□ -0.28
VRK3-202ENST00000377011 MMGT1Q8N4V1 131 aa13.33□□□□□ -0.28
VRK3-202ENST00000377011 SPIRE2Q8WWL2 714 aa13.33□□□□□ -0.28
VRK3-202ENST00000377011 DDX12PQ92771 950 aa13.33□□□□□ -0.28
VRK3-202ENST00000377011 ALS2CR12Q96Q35 445 aa13.33□□□□□ -0.28
VRK3-202ENST00000377011 TRIM6Q9C030 488 aaPredicted RBP13.33□□□□□ -0.28
VRK3-202ENST00000377011 ZHX3Q9H4I2 956 aa13.33□□□□□ -0.28
VRK3-202ENST00000377011 TMEM134Q9H6X4 195 aa13.33□□□□□ -0.28
VRK3-202ENST00000377011 TBC1D7Q9P0N9 293 aa13.33□□□□□ -0.28
VRK3-202ENST00000377011 THEGQ9P2T0 379 aa13.33□□□□□ -0.28
VRK3-202ENST00000377011 PRG3Q9Y2Y8 225 aaPredicted RBP13.33□□□□□ -0.28
VRK3-202ENST00000377011 NRP1O14786 923 aa13.32□□□□□ -0.28
VRK3-202ENST00000377011 TBX10O75333 385 aa13.32□□□□□ -0.28
VRK3-202ENST00000377011 IVLP07476 585 aa13.32□□□□□ -0.28
VRK3-202ENST00000377011 HARSP12081 509 aaKnown RBP13.32□□□□□ -0.28
VRK3-202ENST00000377011 TCP1P17987 556 aaKnown RBP13.32□□□□□ -0.28
VRK3-202ENST00000377011 EFNA5P52803 228 aa13.32□□□□□ -0.28
VRK3-202ENST00000377011 MARSP56192 900 aaKnown RBP13.32□□□□□ -0.28
VRK3-202ENST00000377011 RNASELQ05823 741 aaKnown RBP13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms