RNA–Protein interactions for RNA: ENST00000376839.7

ACTN1-202, Transcript of actinin alpha 1, humanhuman

TSL 2 BASIC

Gene ACTN1, Length 2,824 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-202ENST00000376839 PIK3CAP42336 1068 aa14.02□□□□□ -0.16
ACTN1-202ENST00000376839 NLRP11P59045 1033 aaKnown RBP14.02□□□□□ -0.16
ACTN1-202ENST00000376839 SP4Q02446 784 aa14.02□□□□□ -0.16
ACTN1-202ENST00000376839 MKRN3Q13064 507 aaKnown RBP14.02□□□□□ -0.16
ACTN1-202ENST00000376839 ZACNQ401N2 412 aa14.02□□□□□ -0.16
ACTN1-202ENST00000376839 KAZNQ674X7 775 aa14.02□□□□□ -0.16
ACTN1-202ENST00000376839 RELL1Q8IUW5 271 aa14.02□□□□□ -0.16
ACTN1-202ENST00000376839 ZCCHC9Q8N567 271 aaKnown RBP14.02□□□□□ -0.16
ACTN1-202ENST00000376839 SAYSD1Q9NPB0 183 aa14.02□□□□□ -0.16
ACTN1-202ENST00000376839 KLHL14Q9P2G3 628 aa14.02□□□□□ -0.16
ACTN1-202ENST00000376839 BRWD3Q6RI45 1802 aa14.02□□□□□ -0.16
ACTN1-202ENST00000376839 VNN1O95497 513 aa14.02□□□□□ -0.17
ACTN1-202ENST00000376839 ETS1P14921 441 aa14.02□□□□□ -0.17
ACTN1-202ENST00000376839 GBP2P32456 591 aaPredicted RBP14.02□□□□□ -0.17
ACTN1-202ENST00000376839 ACOT2P49753 483 aa14.02□□□□□ -0.17
ACTN1-202ENST00000376839 CLNS1AP54105 237 aaKnown RBP14.02□□□□□ -0.17
ACTN1-202ENST00000376839 RNF43Q68DV7 783 aa14.02□□□□□ -0.17
ACTN1-202ENST00000376839 SCARA3Q6AZY7 606 aa14.02□□□□□ -0.17
ACTN1-202ENST00000376839 TMEM270Q6UE05 265 aa14.02□□□□□ -0.17
ACTN1-202ENST00000376839 OGFOD1Q8N543 542 aa14.02□□□□□ -0.17
ACTN1-202ENST00000376839 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.02□□□□□ -0.17
ACTN1-202ENST00000376839 CNKSR1Q969H4 720 aa14.02□□□□□ -0.17
ACTN1-202ENST00000376839 PITPNM3Q9BZ71 974 aa14.02□□□□□ -0.17
ACTN1-202ENST00000376839 DNPEPQ9ULA0 475 aa14.02□□□□□ -0.17
ACTN1-202ENST00000376839 PCDHA10Q9Y5I2 948 aa14.02□□□□□ -0.17
ACTN1-202ENST00000376839 EXOC1LA0A1B0GW35 172 aa14.01□□□□□ -0.17
ACTN1-202ENST00000376839 FAM47DPA6NHR8 397 aa14.01□□□□□ -0.17
ACTN1-202ENST00000376839 ECM2O94769 699 aaPredicted RBP14.01□□□□□ -0.17
ACTN1-202ENST00000376839 C4BPAP04003 597 aaKnown RBP14.01□□□□□ -0.17
ACTN1-202ENST00000376839 MSH2P43246 934 aa14.01□□□□□ -0.17
ACTN1-202ENST00000376839 BRDTQ58F21 947 aaPredicted RBP14.01□□□□□ -0.17
ACTN1-202ENST00000376839 WDR44Q5JSH3 913 aa14.01□□□□□ -0.17
ACTN1-202ENST00000376839 LIN9Q5TKA1 542 aa14.01□□□□□ -0.17
ACTN1-202ENST00000376839 ARHGEF16Q5VV41 709 aa14.01□□□□□ -0.17
ACTN1-202ENST00000376839 PPP1R21Q6ZMI0 780 aa14.01□□□□□ -0.17
ACTN1-202ENST00000376839 CAPN12Q6ZSI9 719 aa14.01□□□□□ -0.17
ACTN1-202ENST00000376839 BBOF1Q8ND07 529 aa14.01□□□□□ -0.17
ACTN1-202ENST00000376839 EXD1Q8NHP7 514 aa14.01□□□□□ -0.17
ACTN1-202ENST00000376839 CCDC77Q9BR77 488 aa14.01□□□□□ -0.17
ACTN1-202ENST00000376839 PLCD4Q9BRC7 762 aa14.01□□□□□ -0.17
ACTN1-202ENST00000376839 C15orf41Q9Y2V0 281 aa14.01□□□□□ -0.17
ACTN1-202ENST00000376839 PCDHB4Q9Y5E5 795 aa14.01□□□□□ -0.17
ACTN1-202ENST00000376839 ACTL7BQ9Y614 415 aa14.01□□□□□ -0.17
ACTN1-202ENST00000376839 RGPD3A6NKT7 1758 aaPredicted RBP14.01□□□□□ -0.17
ACTN1-202ENST00000376839 RGPD4Q7Z3J3 1758 aa14.01□□□□□ -0.17
ACTN1-202ENST00000376839 WDR46O15213 610 aaKnown RBP14.01□□□□□ -0.17
ACTN1-202ENST00000376839 TLR3O15455 904 aaKnown RBP14.01□□□□□ -0.17
ACTN1-202ENST00000376839 GNA15P30679 374 aa14.01□□□□□ -0.17
ACTN1-202ENST00000376839 RPL7AP62424 266 aaKnown RBP14.01□□□□□ -0.17
ACTN1-202ENST00000376839 DNAJC3Q13217 504 aa14.01□□□□□ -0.17
ACTN1-202ENST00000376839 TRABD2AQ86V40 505 aa14.01□□□□□ -0.17
ACTN1-202ENST00000376839 ABRAQ8N0Z2 381 aa14.01□□□□□ -0.17
ACTN1-202ENST00000376839 ANKRD35Q8N283 1001 aa14.01□□□□□ -0.17
ACTN1-202ENST00000376839 CCHCR1Q8TD31 782 aa14.01□□□□□ -0.17
ACTN1-202ENST00000376839 WNK4Q96J92 1243 aa14.01□□□□□ -0.17
ACTN1-202ENST00000376839 FNBP1Q96RU3 617 aa14.01□□□□□ -0.17
ACTN1-202ENST00000376839 ADAM33Q9BZ11 813 aa14.01□□□□□ -0.17
ACTN1-202ENST00000376839 SLCO1B3Q9NPD5 702 aa14.01□□□□□ -0.17
ACTN1-202ENST00000376839 PGAP2Q9UHJ9 254 aa14.01□□□□□ -0.17
ACTN1-202ENST00000376839 GRID1Q9ULK0 1009 aa14.01□□□□□ -0.17
ACTN1-202ENST00000376839 POC1B-GALNT4F8VUJ3 575 aa14□□□□□ -0.17
ACTN1-202ENST00000376839 LIASO43766 372 aa14□□□□□ -0.17
ACTN1-202ENST00000376839 EXTL3O43909 919 aa14□□□□□ -0.17
ACTN1-202ENST00000376839 ASMTLO95671 621 aa14□□□□□ -0.17
ACTN1-202ENST00000376839 BPIFB4P59827 614 aa14□□□□□ -0.17
ACTN1-202ENST00000376839 IL9RQ01113 521 aa14□□□□□ -0.17
ACTN1-202ENST00000376839 NFX1Q12986 1120 aaKnown RBP14□□□□□ -0.17
ACTN1-202ENST00000376839 CUL2Q13617 745 aa14□□□□□ -0.17
ACTN1-202ENST00000376839 ZBTB41Q5SVQ8 909 aa14□□□□□ -0.17
ACTN1-202ENST00000376839 PLEKHA7Q6IQ23 1121 aa14□□□□□ -0.17
ACTN1-202ENST00000376839 SWSAP1Q6NVH7 229 aa14□□□□□ -0.17
ACTN1-202ENST00000376839 NLRX1Q86UT6 975 aa14□□□□□ -0.17
ACTN1-202ENST00000376839 ERICH1Q86X53 443 aa14□□□□□ -0.17
ACTN1-202ENST00000376839 IFT74Q96LB3 600 aa14□□□□□ -0.17
ACTN1-202ENST00000376839 HAPLN2Q9GZV7 340 aa14□□□□□ -0.17
ACTN1-202ENST00000376839 KIAA1586Q9HCI6 787 aa14□□□□□ -0.17
ACTN1-202ENST00000376839 PDLIM7Q9NR12 457 aa14□□□□□ -0.17
ACTN1-202ENST00000376839 ARHGAP28Q9P2N2 729 aa14□□□□□ -0.17
ACTN1-202ENST00000376839 SEPT9Q9UHD8 586 aaPredicted RBP14□□□□□ -0.17
ACTN1-202ENST00000376839 WDR81Q562E7 1941 aa14□□□□□ -0.17
ACTN1-202ENST00000376839 ZNF541Q9H0D2 1346 aa14□□□□□ -0.17
ACTN1-202ENST00000376839 ABHD2P08910 425 aa14□□□□□ -0.17
ACTN1-202ENST00000376839 CCNB1P14635 433 aa14□□□□□ -0.17
ACTN1-202ENST00000376839 PECAM1P16284 738 aaPredicted RBP14□□□□□ -0.17
ACTN1-202ENST00000376839 ATF7P17544 494 aaPredicted RBP14□□□□□ -0.17
ACTN1-202ENST00000376839 LIG4P49917 911 aa14□□□□□ -0.17
ACTN1-202ENST00000376839 CLDN10P78369 228 aa14□□□□□ -0.17
ACTN1-202ENST00000376839 PSMD6Q15008 389 aa14□□□□□ -0.17
ACTN1-202ENST00000376839 PKN2Q16513 984 aaKnown RBP14□□□□□ -0.17
ACTN1-202ENST00000376839 MFSD7Q6UXD7 560 aa14□□□□□ -0.17
ACTN1-202ENST00000376839 UTP4Q969X6 686 aaKnown RBP14□□□□□ -0.17
ACTN1-202ENST00000376839 ACSF2Q96CM8 615 aaPredicted RBP14□□□□□ -0.17
ACTN1-202ENST00000376839 MRRFQ96E11 262 aaKnown RBP14□□□□□ -0.17
ACTN1-202ENST00000376839 POLR3FQ9H1D9 316 aaPredicted RBP14□□□□□ -0.17
ACTN1-202ENST00000376839 MYLK2Q9H1R3 596 aa14□□□□□ -0.17
ACTN1-202ENST00000376839 C17orf75Q9HAS0 396 aa14□□□□□ -0.17
ACTN1-202ENST00000376839 DNALI1O14645 258 aaPredicted RBP14□□□□□ -0.17
ACTN1-202ENST00000376839 ACVR2BQ13705 512 aa14□□□□□ -0.17
ACTN1-202ENST00000376839 ZFYVE27Q5T4F4 411 aa14□□□□□ -0.17
ACTN1-202ENST00000376839 C4orf33Q8N1A6 199 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms