RNA–Protein interactions for RNA: ENST00000376575.7

DDR1-228, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 1 (best) BASIC

Gene DDR1, Length 732 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-228ENST00000376575 KRT13P13646 458 aa21.45■■□□□ 1.02
DDR1-228ENST00000376575 TAF6P49848 677 aa21.45■■□□□ 1.02
DDR1-228ENST00000376575 KCNC3Q14003 757 aa21.45■■□□□ 1.02
DDR1-228ENST00000376575 STX1AQ16623 288 aa21.45■■□□□ 1.02
DDR1-228ENST00000376575 TCEAL5Q5H9L2 206 aa21.45■■□□□ 1.02
DDR1-228ENST00000376575 SV2AQ7L0J3 742 aa21.45■■□□□ 1.02
DDR1-228ENST00000376575 LIMS2Q7Z4I7 341 aa21.45■■□□□ 1.02
DDR1-228ENST00000376575 IRF2BP1Q8IU81 584 aa21.45■■□□□ 1.02
DDR1-228ENST00000376575 MICAL1Q8TDZ2 1067 aa21.45■■□□□ 1.02
DDR1-228ENST00000376575 AUTS2Q8WXX7 1259 aa21.45■■□□□ 1.02
DDR1-228ENST00000376575 ZNF560Q96MR9 790 aa21.45■■□□□ 1.02
DDR1-228ENST00000376575 XYLT2Q9H1B5 865 aa21.45■■□□□ 1.02
DDR1-228ENST00000376575 GDAP2Q9NXN4 497 aa21.45■■□□□ 1.02
DDR1-228ENST00000376575 FNIP2Q9P278 1114 aa21.45■■□□□ 1.02
DDR1-228ENST00000376575 ARMCX3Q9UH62 379 aaPredicted RBP21.45■■□□□ 1.02
DDR1-228ENST00000376575 PCDHB8Q9UN66 801 aa21.45■■□□□ 1.02
DDR1-228ENST00000376575 BRWD1Q9NSI6 2320 aa21.45■■□□□ 1.02
DDR1-228ENST00000376575 TBC1D4O60343 1298 aa21.44■■□□□ 1.02
DDR1-228ENST00000376575 VNN1O95497 513 aa21.44■■□□□ 1.02
DDR1-228ENST00000376575 FGFR1OPO95684 399 aaKnown RBP21.44■■□□□ 1.02
DDR1-228ENST00000376575 CYP11A1P05108 521 aa21.44■■□□□ 1.02
DDR1-228ENST00000376575 TKTP29401 623 aaKnown RBP21.44■■□□□ 1.02
DDR1-228ENST00000376575 TYRO3Q06418 890 aa21.44■■□□□ 1.02
DDR1-228ENST00000376575 DUSP6Q16828 381 aa21.44■■□□□ 1.02
DDR1-228ENST00000376575 SLC35C1Q96A29 364 aa21.44■■□□□ 1.02
DDR1-228ENST00000376575 SENP8Q96LD8 212 aa21.44■■□□□ 1.02
DDR1-228ENST00000376575 CDCA3Q99618 268 aaPredicted RBP21.44■■□□□ 1.02
DDR1-228ENST00000376575 VRTNQ9H8Y1 702 aa21.44■■□□□ 1.02
DDR1-228ENST00000376575 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP21.44■■□□□ 1.02
DDR1-228ENST00000376575 XIRP2A4UGR9 3374 aa21.43■■□□□ 1.02
DDR1-228ENST00000376575 KPNA7A9QM74 516 aa21.43■■□□□ 1.02
DDR1-228ENST00000376575 OAZ2O95190 189 aa21.43■■□□□ 1.02
DDR1-228ENST00000376575 C1RP00736 705 aa21.43■■□□□ 1.02
DDR1-228ENST00000376575 CNPP09543 421 aaKnown RBP21.43■■□□□ 1.02
DDR1-228ENST00000376575 TRIM49P0CI25 452 aa21.43■■□□□ 1.02
DDR1-228ENST00000376575 TRIM49CP0CI26 452 aa21.43■■□□□ 1.02
DDR1-228ENST00000376575 TYMPP19971 482 aa21.43■■□□□ 1.02
DDR1-228ENST00000376575 HYAL1Q12794 435 aa21.43■■□□□ 1.02
DDR1-228ENST00000376575 CTC1Q2NKJ3 1217 aa21.43■■□□□ 1.02
DDR1-228ENST00000376575 SV2CQ496J9 727 aa21.43■■□□□ 1.02
DDR1-228ENST00000376575 PDXDC1Q6P996 788 aa21.43■■□□□ 1.02
DDR1-228ENST00000376575 C11orf57Q6ZUT1 292 aaPredicted RBP21.43■■□□□ 1.02
DDR1-228ENST00000376575 ENOX1Q8TC92 643 aaKnown RBP21.43■■□□□ 1.02
DDR1-228ENST00000376575 RIN2Q8WYP3 895 aaPredicted RBP21.43■■□□□ 1.02
DDR1-228ENST00000376575 KLHL5Q96PQ7 755 aa21.43■■□□□ 1.02
DDR1-228ENST00000376575 TMEM8AQ9HCN3 771 aa21.43■■□□□ 1.02
DDR1-228ENST00000376575 BACE2Q9Y5Z0 518 aa21.43■■□□□ 1.02
DDR1-228ENST00000376575 TSC2P49815 1807 aa21.43■■□□□ 1.02
DDR1-228ENST00000376575 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP21.42■■□□□ 1.02
DDR1-228ENST00000376575 PMM2O15305 246 aa21.42■■□□□ 1.02
DDR1-228ENST00000376575 CSPG5O95196 566 aa21.42■■□□□ 1.02
DDR1-228ENST00000376575 KRT19P08727 400 aa21.42■■□□□ 1.02
DDR1-228ENST00000376575 ATICP31939 592 aa21.42■■□□□ 1.02
DDR1-228ENST00000376575 VARS2Q5ST30 1063 aaKnown RBP21.42■■□□□ 1.02
DDR1-228ENST00000376575 KIAA1841Q6NSI8 718 aa21.42■■□□□ 1.02
DDR1-228ENST00000376575 TRIM59Q8IWR1 403 aa21.42■■□□□ 1.02
DDR1-228ENST00000376575 APPL2Q8NEU8 664 aa21.42■■□□□ 1.02
DDR1-228ENST00000376575 PPP2R3CQ969Q6 453 aa21.42■■□□□ 1.02
DDR1-228ENST00000376575 HPDLQ96IR7 371 aa21.42■■□□□ 1.02
DDR1-228ENST00000376575 THAP9Q9H5L6 903 aa21.42■■□□□ 1.02
DDR1-228ENST00000376575 MTRRQ9UBK8 725 aa21.42■■□□□ 1.02
DDR1-228ENST00000376575 C2CD2LO14523 706 aa21.41■■□□□ 1.02
DDR1-228ENST00000376575 TEX28O15482 410 aa21.41■■□□□ 1.02
DDR1-228ENST00000376575 CLASP2O75122 1294 aaKnown RBP21.41■■□□□ 1.02
DDR1-228ENST00000376575 GTF2F1P35269 517 aaKnown RBP eCLIP21.41■■□□□ 1.02
DDR1-228ENST00000376575 GCLMP48507 274 aa21.41■■□□□ 1.02
DDR1-228ENST00000376575 CREMQ03060 361 aa21.41■■□□□ 1.02
DDR1-228ENST00000376575 MYO1EQ12965 1108 aa21.41■■□□□ 1.02
DDR1-228ENST00000376575 NCOA4Q13772 614 aa21.41■■□□□ 1.02
DDR1-228ENST00000376575 PRSS55Q6UWB4 352 aaPredicted RBP21.41■■□□□ 1.02
DDR1-228ENST00000376575 TMEM184AQ6ZMB5 413 aa21.41■■□□□ 1.02
DDR1-228ENST00000376575 ANKS3Q6ZW76 656 aa21.41■■□□□ 1.02
DDR1-228ENST00000376575 CEP57Q86XR8 500 aa21.41■■□□□ 1.02
DDR1-228ENST00000376575 MAFAQ8NHW3 353 aaPredicted RBP21.41■■□□□ 1.02
DDR1-228ENST00000376575 CLSTN3Q9BQT9 956 aa21.41■■□□□ 1.02
DDR1-228ENST00000376575 TLE6Q9H808 572 aa21.41■■□□□ 1.02
DDR1-228ENST00000376575 COQ4Q9Y3A0 265 aa21.41■■□□□ 1.02
DDR1-228ENST00000376575 ARHGEF37A1IGU5 675 aa21.4■■□□□ 1.02
DDR1-228ENST00000376575 FSD2A1L4K1 749 aa21.4■■□□□ 1.02
DDR1-228ENST00000376575 TULP1O00294 542 aaPredicted RBP21.4■■□□□ 1.02
DDR1-228ENST00000376575 CYB561D2O14569 222 aa21.4■■□□□ 1.02
DDR1-228ENST00000376575 PER2O15055 1255 aa21.4■■□□□ 1.02
DDR1-228ENST00000376575 NCK2O43639 380 aa21.4■■□□□ 1.02
DDR1-228ENST00000376575 STX10O60499 249 aa21.4■■□□□ 1.02
DDR1-228ENST00000376575 NRIP1P48552 1158 aa21.4■■□□□ 1.02
DDR1-228ENST00000376575 MYL6P60660 151 aa21.4■■□□□ 1.02
DDR1-228ENST00000376575 PSMD5Q16401 504 aa21.4■■□□□ 1.02
DDR1-228ENST00000376575 KRT39Q6A163 491 aa21.4■■□□□ 1.02
DDR1-228ENST00000376575 SLC8B1Q6J4K2 584 aa21.4■■□□□ 1.02
DDR1-228ENST00000376575 RSPO2Q6UXX9 243 aaPredicted RBP21.4■■□□□ 1.02
DDR1-228ENST00000376575 DSTYKQ6XUX3 929 aa21.4■■□□□ 1.02
DDR1-228ENST00000376575 EFHBQ8N7U6 833 aa21.4■■□□□ 1.02
DDR1-228ENST00000376575 SLC22A17Q8WUG5 538 aa21.4■■□□□ 1.02
DDR1-228ENST00000376575 EMILIN2Q9BXX0 1053 aa21.4■■□□□ 1.02
DDR1-228ENST00000376575 DSEQ9UL01 958 aa21.4■■□□□ 1.02
DDR1-228ENST00000376575 SYCE3A1L190 88 aa21.39■■□□□ 1.01
DDR1-228ENST00000376575 ASS1P00966 412 aaKnown RBP21.39■■□□□ 1.01
DDR1-228ENST00000376575 CCDC192P0DO97 292 aa21.39■■□□□ 1.01
DDR1-228ENST00000376575 ODC1P11926 461 aa21.39■■□□□ 1.01
DDR1-228ENST00000376575 ADAM15Q13444 863 aa21.39■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms