RNA–Protein interactions for RNA: ENST00000376496.4

CLCN6-206, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5 BASIC

Gene CLCN6, Length 2,922 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-206ENST00000376496 UBR7Q8N806 425 aa13.46□□□□□ -0.25
CLCN6-206ENST00000376496 RABGGTAQ92696 567 aa13.46□□□□□ -0.25
CLCN6-206ENST00000376496 C11orf70Q9BRQ4 267 aa13.46□□□□□ -0.25
CLCN6-206ENST00000376496 NUP85Q9BW27 656 aa13.46□□□□□ -0.25
CLCN6-206ENST00000376496 KATNAL1Q9BW62 490 aa13.46□□□□□ -0.25
CLCN6-206ENST00000376496 TRIM6Q9C030 488 aaPredicted RBP13.46□□□□□ -0.25
CLCN6-206ENST00000376496 TSKSQ9UJT2 592 aa13.46□□□□□ -0.25
CLCN6-206ENST00000376496 A0A0A6YYK5 440 aaPredicted RBP13.46□□□□□ -0.25
CLCN6-206ENST00000376496 ADAMTS4O75173 837 aa13.46□□□□□ -0.25
CLCN6-206ENST00000376496 MARCKSL1P49006 195 aa13.46□□□□□ -0.25
CLCN6-206ENST00000376496 TWNKQ96RR1 684 aa13.46□□□□□ -0.25
CLCN6-206ENST00000376496 CNOT8Q9UFF9 292 aaKnown RBP13.46□□□□□ -0.25
CLCN6-206ENST00000376496 NOC2LQ9Y3T9 749 aaKnown RBP13.46□□□□□ -0.25
CLCN6-206ENST00000376496 RECQL4O94761 1208 aa13.46□□□□□ -0.26
CLCN6-206ENST00000376496 GZMAP12544 262 aa13.46□□□□□ -0.26
CLCN6-206ENST00000376496 UNGP13051 313 aaPredicted RBP13.46□□□□□ -0.26
CLCN6-206ENST00000376496 RRM1P23921 792 aa13.46□□□□□ -0.26
CLCN6-206ENST00000376496 ZNF211Q13398 564 aaPredicted RBP13.46□□□□□ -0.26
CLCN6-206ENST00000376496 ZNF667Q5HYK9 610 aa13.46□□□□□ -0.26
CLCN6-206ENST00000376496 AADACL2Q6P093 401 aa13.46□□□□□ -0.26
CLCN6-206ENST00000376496 DPH6Q7L8W6 267 aa13.46□□□□□ -0.26
CLCN6-206ENST00000376496 ZNF606Q8WXB4 792 aa13.46□□□□□ -0.26
CLCN6-206ENST00000376496 CCDC94Q9BW85 323 aaPredicted RBP13.46□□□□□ -0.26
CLCN6-206ENST00000376496 ZNF446Q9NWS9 450 aa13.46□□□□□ -0.26
CLCN6-206ENST00000376496 DPP3Q9NY33 737 aa13.46□□□□□ -0.26
CLCN6-206ENST00000376496 STXBP5LQ9Y2K9 1186 aa13.46□□□□□ -0.26
CLCN6-206ENST00000376496 MEIS3P2A8K0S8 358 aa13.45□□□□□ -0.26
CLCN6-206ENST00000376496 CEP104O60308 925 aa13.45□□□□□ -0.26
CLCN6-206ENST00000376496 H2AFXP16104 143 aaPredicted RBP13.45□□□□□ -0.26
CLCN6-206ENST00000376496 GRM5P41594 1212 aa13.45□□□□□ -0.26
CLCN6-206ENST00000376496 VEGFBP49765 207 aa13.45□□□□□ -0.26
CLCN6-206ENST00000376496 NFX1Q12986 1120 aaKnown RBP13.45□□□□□ -0.26
CLCN6-206ENST00000376496 LLGL1Q15334 1064 aa13.45□□□□□ -0.26
CLCN6-206ENST00000376496 IFI16Q16666 785 aaKnown RBP13.45□□□□□ -0.26
CLCN6-206ENST00000376496 NOTUMQ6P988 496 aa13.45□□□□□ -0.26
CLCN6-206ENST00000376496 SLFN11Q7Z7L1 901 aa13.45□□□□□ -0.26
CLCN6-206ENST00000376496 SESTD1Q86VW0 696 aa13.45□□□□□ -0.26
CLCN6-206ENST00000376496 SPATA4Q8NEY3 305 aa13.45□□□□□ -0.26
CLCN6-206ENST00000376496 HDAC7Q8WUI4 952 aa13.45□□□□□ -0.26
CLCN6-206ENST00000376496 TAF4BQ92750 862 aa13.45□□□□□ -0.26
CLCN6-206ENST00000376496 RBM12Q9NTZ6 932 aaKnown RBP13.45□□□□□ -0.26
CLCN6-206ENST00000376496 CACNG4Q9UBN1 327 aa13.45□□□□□ -0.26
CLCN6-206ENST00000376496 GTF2IRD1Q9UHL9 959 aa13.45□□□□□ -0.26
CLCN6-206ENST00000376496 CDY2AQ9Y6F7 541 aa13.45□□□□□ -0.26
CLCN6-206ENST00000376496 GRIN2DO15399 1336 aa13.45□□□□□ -0.26
CLCN6-206ENST00000376496 SCN1AP35498 2009 aa13.45□□□□□ -0.26
CLCN6-206ENST00000376496 CD19P15391 556 aa13.45□□□□□ -0.26
CLCN6-206ENST00000376496 MMS22LQ6ZRQ5 1243 aa13.45□□□□□ -0.26
CLCN6-206ENST00000376496 GPR161Q8N6U8 529 aaKnown RBP13.45□□□□□ -0.26
CLCN6-206ENST00000376496 HPDLQ96IR7 371 aa13.45□□□□□ -0.26
CLCN6-206ENST00000376496 SPC25Q9HBM1 224 aa13.45□□□□□ -0.26
CLCN6-206ENST00000376496 GOLGA2P5Q9HBQ8 144 aa13.45□□□□□ -0.26
CLCN6-206ENST00000376496 PARP2Q9UGN5 583 aa13.45□□□□□ -0.26
CLCN6-206ENST00000376496 ALG6Q9Y672 507 aa13.45□□□□□ -0.26
CLCN6-206ENST00000376496 PRLRP16471 622 aa13.44□□□□□ -0.26
CLCN6-206ENST00000376496 HOXC8P31273 242 aa13.44□□□□□ -0.26
CLCN6-206ENST00000376496 ZNF132P52740 706 aa13.44□□□□□ -0.26
CLCN6-206ENST00000376496 SLC7A5Q01650 507 aa13.44□□□□□ -0.26
CLCN6-206ENST00000376496 CKAP4Q07065 602 aaKnown RBP13.44□□□□□ -0.26
CLCN6-206ENST00000376496 UBXN11Q5T124 520 aa13.44□□□□□ -0.26
CLCN6-206ENST00000376496 ADAT2Q7Z6V5 191 aaKnown RBP13.44□□□□□ -0.26
CLCN6-206ENST00000376496 FAM228AQ86W67 206 aa13.44□□□□□ -0.26
CLCN6-206ENST00000376496 ARRDC4Q8NCT1 418 aa13.44□□□□□ -0.26
CLCN6-206ENST00000376496 ZNF564Q8TBZ8 553 aaPredicted RBP13.44□□□□□ -0.26
CLCN6-206ENST00000376496 KRT35Q92764 455 aa13.44□□□□□ -0.26
CLCN6-206ENST00000376496 CELF4Q9BZC1 486 aaKnown RBP13.44□□□□□ -0.26
CLCN6-206ENST00000376496 ASB7Q9H672 318 aa13.44□□□□□ -0.26
CLCN6-206ENST00000376496 SRRDQ9UH36 339 aa13.44□□□□□ -0.26
CLCN6-206ENST00000376496 CNTN6Q9UQ52 1028 aa13.44□□□□□ -0.26
CLCN6-206ENST00000376496 SCN10AQ9Y5Y9 1956 aa13.44□□□□□ -0.26
CLCN6-206ENST00000376496 VSNL1P62760 191 aa13.44□□□□□ -0.26
CLCN6-206ENST00000376496 DCAF12L1Q5VU92 463 aa13.44□□□□□ -0.26
CLCN6-206ENST00000376496 MCOLN2Q8IZK6 566 aa13.44□□□□□ -0.26
CLCN6-206ENST00000376496 C1orf131Q8NDD1 294 aaKnown RBP13.44□□□□□ -0.26
CLCN6-206ENST00000376496 FAM81BQ96LP2 452 aa13.44□□□□□ -0.26
CLCN6-206ENST00000376496 AP1M1Q9BXS5 423 aa13.44□□□□□ -0.26
CLCN6-206ENST00000376496 AMFRQ9UKV5 643 aa13.44□□□□□ -0.26
CLCN6-206ENST00000376496 HCRTO43612 131 aa13.43□□□□□ -0.26
CLCN6-206ENST00000376496 CYP1A1P04798 512 aaPredicted RBP13.43□□□□□ -0.26
CLCN6-206ENST00000376496 COMTP21964 271 aa13.43□□□□□ -0.26
CLCN6-206ENST00000376496 IGFBP6P24592 240 aaPredicted RBP13.43□□□□□ -0.26
CLCN6-206ENST00000376496 NSFP46459 744 aaKnown RBP13.43□□□□□ -0.26
CLCN6-206ENST00000376496 APLP1P51693 650 aa13.43□□□□□ -0.26
CLCN6-206ENST00000376496 CRYBB1P53674 252 aaPredicted RBP13.43□□□□□ -0.26
CLCN6-206ENST00000376496 BPIFB4P59827 614 aa13.43□□□□□ -0.26
CLCN6-206ENST00000376496 NOMO3P69849 1222 aa13.43□□□□□ -0.26
CLCN6-206ENST00000376496 DCAF4L1Q3SXM0 396 aa13.43□□□□□ -0.26
CLCN6-206ENST00000376496 TWF2Q6IBS0 349 aaKnown RBP13.43□□□□□ -0.26
CLCN6-206ENST00000376496 GSPT2Q8IYD1 628 aaKnown RBP13.43□□□□□ -0.26
CLCN6-206ENST00000376496 ALG3Q92685 438 aa13.43□□□□□ -0.26
CLCN6-206ENST00000376496 SNX27Q96L92 541 aa13.43□□□□□ -0.26
CLCN6-206ENST00000376496 LRRC1Q9BTT6 524 aa13.43□□□□□ -0.26
CLCN6-206ENST00000376496 UPF3AQ9H1J1 476 aaKnown RBP13.43□□□□□ -0.26
CLCN6-206ENST00000376496 ABCB6Q9NP58 842 aa13.43□□□□□ -0.26
CLCN6-206ENST00000376496 TRMT13Q9NUP7 481 aaKnown RBP13.43□□□□□ -0.26
CLCN6-206ENST00000376496 TJP2Q9UDY2 1190 aa13.43□□□□□ -0.26
CLCN6-206ENST00000376496 CHRNA1P02708 482 aa13.43□□□□□ -0.26
CLCN6-206ENST00000376496 CYP1A2P05177 515 aa13.43□□□□□ -0.26
CLCN6-206ENST00000376496 GNAT1P11488 350 aa13.43□□□□□ -0.26
CLCN6-206ENST00000376496 PAFAH1B1P43034 410 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms