RNA–Protein interactions for RNA: ENST00000376233.7

ZNF549-202, Transcript of zinc finger protein 549, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ZNF549, Length 4,053 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549-202ENST00000376233 WNK4Q96J92 1243 aa11.23□□□□□ -0.61
ZNF549-202ENST00000376233 LBHD1Q9BQE6 289 aaPredicted RBP11.23□□□□□ -0.61
ZNF549-202ENST00000376233 A1CFQ9NQ94 594 aaKnown RBP11.23□□□□□ -0.61
ZNF549-202ENST00000376233 STXBP5LQ9Y2K9 1186 aa11.23□□□□□ -0.61
ZNF549-202ENST00000376233 CCT8L1PA6NM43 557 aa11.22□□□□□ -0.61
ZNF549-202ENST00000376233 MCF2LO15068 1137 aa11.22□□□□□ -0.61
ZNF549-202ENST00000376233 CHUKO15111 745 aa11.22□□□□□ -0.61
ZNF549-202ENST00000376233 MAPTP10636 758 aaKnown RBP11.22□□□□□ -0.61
ZNF549-202ENST00000376233 ADSSP30520 456 aa11.22□□□□□ -0.61
ZNF549-202ENST00000376233 CHKAP35790 457 aa11.22□□□□□ -0.61
ZNF549-202ENST00000376233 MSH2P43246 934 aa11.22□□□□□ -0.61
ZNF549-202ENST00000376233 MYL6P60660 151 aa11.22□□□□□ -0.61
ZNF549-202ENST00000376233 PARP9Q8IXQ6 854 aa11.22□□□□□ -0.61
ZNF549-202ENST00000376233 SCYL3Q8IZE3 742 aa11.22□□□□□ -0.61
ZNF549-202ENST00000376233 CDH16O75309 829 aa11.22□□□□□ -0.61
ZNF549-202ENST00000376233 SUPT20HL2P0C7V6 817 aa11.22□□□□□ -0.61
ZNF549-202ENST00000376233 KRT3P12035 628 aa11.22□□□□□ -0.61
ZNF549-202ENST00000376233 SESN3P58005 492 aa11.22□□□□□ -0.61
ZNF549-202ENST00000376233 SNRPFP62306 86 aaKnown RBP11.22□□□□□ -0.61
ZNF549-202ENST00000376233 TRIM72Q6ZMU5 477 aa11.22□□□□□ -0.61
ZNF549-202ENST00000376233 TRPM8Q7Z2W7 1104 aa11.22□□□□□ -0.61
ZNF549-202ENST00000376233 PRPF31Q8WWY3 499 aaKnown RBP11.22□□□□□ -0.61
ZNF549-202ENST00000376233 RSRC1Q96IZ7 334 aaKnown RBP11.22□□□□□ -0.61
ZNF549-202ENST00000376233 TMEM59LQ9UK28 342 aa11.22□□□□□ -0.61
ZNF549-202ENST00000376233 ZNF862O60290 1169 aa11.22□□□□□ -0.61
ZNF549-202ENST00000376233 PROSCO94903 275 aa11.22□□□□□ -0.61
ZNF549-202ENST00000376233 INHBAP08476 426 aa11.22□□□□□ -0.61
ZNF549-202ENST00000376233 CHRNB2P17787 502 aa11.22□□□□□ -0.61
ZNF549-202ENST00000376233 GARTP22102 1010 aa11.22□□□□□ -0.61
ZNF549-202ENST00000376233 ZC3H3Q8IXZ2 948 aaKnown RBP11.22□□□□□ -0.61
ZNF549-202ENST00000376233 PDIK1LQ8N165 341 aa11.22□□□□□ -0.61
ZNF549-202ENST00000376233 EMC1Q8N766 993 aa11.22□□□□□ -0.61
ZNF549-202ENST00000376233 CFAP36Q96G28 342 aa11.22□□□□□ -0.61
ZNF549-202ENST00000376233 TMEM121Q9BTD3 319 aa11.22□□□□□ -0.61
ZNF549-202ENST00000376233 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.22□□□□□ -0.61
ZNF549-202ENST00000376233 M0QYV0 167 aa11.21□□□□□ -0.61
ZNF549-202ENST00000376233 MAFGO15525 162 aa11.21□□□□□ -0.61
ZNF549-202ENST00000376233 PGK2P07205 417 aa11.21□□□□□ -0.61
ZNF549-202ENST00000376233 FDX1P10109 184 aa11.21□□□□□ -0.61
ZNF549-202ENST00000376233 SCTRP47872 440 aa11.21□□□□□ -0.61
ZNF549-202ENST00000376233 IRX4P78413 519 aa11.21□□□□□ -0.61
ZNF549-202ENST00000376233 CAV1Q03135 178 aa11.21□□□□□ -0.61
ZNF549-202ENST00000376233 TFDP1Q14186 410 aa11.21□□□□□ -0.61
ZNF549-202ENST00000376233 ANKRD20A3Q5VUR7 823 aa11.21□□□□□ -0.61
ZNF549-202ENST00000376233 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.21□□□□□ -0.61
ZNF549-202ENST00000376233 BORCS6Q96GS4 357 aa11.21□□□□□ -0.61
ZNF549-202ENST00000376233 SPATA33Q96N06 139 aa11.21□□□□□ -0.61
ZNF549-202ENST00000376233 ECT2Q9H8V3 914 aa11.21□□□□□ -0.61
ZNF549-202ENST00000376233 C17orf75Q9HAS0 396 aa11.21□□□□□ -0.61
ZNF549-202ENST00000376233 EIF4E1BA6NMX2 242 aaKnown RBP11.21□□□□□ -0.61
ZNF549-202ENST00000376233 TROVE2P10155 538 aaKnown RBP eCLIP11.21□□□□□ -0.61
ZNF549-202ENST00000376233 TCF7P36402 384 aaPredicted RBP11.21□□□□□ -0.61
ZNF549-202ENST00000376233 DNAJC3Q13217 504 aa11.21□□□□□ -0.61
ZNF549-202ENST00000376233 FAM102AQ5T9C2 384 aaPredicted RBP11.21□□□□□ -0.61
ZNF549-202ENST00000376233 TRIM68Q6AZZ1 485 aa11.21□□□□□ -0.61
ZNF549-202ENST00000376233 NIPA1Q7RTP0 329 aa11.21□□□□□ -0.61
ZNF549-202ENST00000376233 SPATA21Q7Z572 469 aa11.21□□□□□ -0.61
ZNF549-202ENST00000376233 OR5B17Q8NGF7 314 aa11.21□□□□□ -0.61
ZNF549-202ENST00000376233 NLRP7Q8WX94 980 aa11.21□□□□□ -0.61
ZNF549-202ENST00000376233 DCPSQ96C86 337 aaKnown RBP11.21□□□□□ -0.61
ZNF549-202ENST00000376233 ADPGKQ9BRR6 497 aa11.21□□□□□ -0.61
ZNF549-202ENST00000376233 TRABDQ9H4I3 376 aa11.21□□□□□ -0.61
ZNF549-202ENST00000376233 SAE1Q9UBE0 346 aaPredicted RBP11.21□□□□□ -0.61
ZNF549-202ENST00000376233 R3HDM2Q9Y2K5 976 aaKnown RBP11.21□□□□□ -0.61
ZNF549-202ENST00000376233 IVNS1ABPQ9Y6Y0 642 aa11.21□□□□□ -0.61
ZNF549-202ENST00000376233 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.21□□□□□ -0.62
ZNF549-202ENST00000376233 CST8O60676 142 aa11.21□□□□□ -0.62
ZNF549-202ENST00000376233 P4HA1P13674 534 aa11.21□□□□□ -0.62
ZNF549-202ENST00000376233 RAP1GAPP47736 663 aa11.21□□□□□ -0.62
ZNF549-202ENST00000376233 NEDD9Q14511 834 aa11.21□□□□□ -0.62
ZNF549-202ENST00000376233 SPARCL1Q14515 664 aa11.21□□□□□ -0.62
ZNF549-202ENST00000376233 ZBTB41Q5SVQ8 909 aa11.21□□□□□ -0.62
ZNF549-202ENST00000376233 EIF1ADQ8N9N8 165 aaKnown RBP11.21□□□□□ -0.62
ZNF549-202ENST00000376233 HELQQ8TDG4 1101 aa11.21□□□□□ -0.62
ZNF549-202ENST00000376233 TRAPPC12Q8WVT3 735 aa11.21□□□□□ -0.62
ZNF549-202ENST00000376233 ZNF606Q8WXB4 792 aa11.21□□□□□ -0.62
ZNF549-202ENST00000376233 TTC17Q96AE7 1141 aa11.21□□□□□ -0.62
ZNF549-202ENST00000376233 DCLK3Q9C098 648 aa11.21□□□□□ -0.62
ZNF549-202ENST00000376233 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.21□□□□□ -0.62
ZNF549-202ENST00000376233 MAGED2Q9UNF1 606 aaPredicted RBP11.21□□□□□ -0.62
ZNF549-202ENST00000376233 USP15Q9Y4E8 981 aaPredicted RBP11.21□□□□□ -0.62
ZNF549-202ENST00000376233 A0A0G2JND7 137 aa11.2□□□□□ -0.62
ZNF549-202ENST00000376233 DHX15O43143 795 aaKnown RBP11.2□□□□□ -0.62
ZNF549-202ENST00000376233 TTC4O95801 387 aa11.2□□□□□ -0.62
ZNF549-202ENST00000376233 MT-ND3P03897 115 aa11.2□□□□□ -0.62
ZNF549-202ENST00000376233 ETS1P14921 441 aa11.2□□□□□ -0.62
ZNF549-202ENST00000376233 PSMC4P43686 418 aa11.2□□□□□ -0.62
ZNF549-202ENST00000376233 RGS7P49802 495 aa11.2□□□□□ -0.62
ZNF549-202ENST00000376233 EAPPQ56P03 285 aaPredicted RBP11.2□□□□□ -0.62
ZNF549-202ENST00000376233 TDRD10Q5VZ19 366 aaKnown RBP11.2□□□□□ -0.62
ZNF549-202ENST00000376233 C1orf228Q6PIY5 440 aa11.2□□□□□ -0.62
ZNF549-202ENST00000376233 ASAP3Q8TDY4 903 aa11.2□□□□□ -0.62
ZNF549-202ENST00000376233 FAM149B1Q96BN6 582 aa11.2□□□□□ -0.62
ZNF549-202ENST00000376233 FIZ1Q96SL8 496 aa11.2□□□□□ -0.62
ZNF549-202ENST00000376233 FAM49AQ9H0Q0 323 aaPredicted RBP11.2□□□□□ -0.62
ZNF549-202ENST00000376233 ETNK1Q9HBU6 452 aa11.2□□□□□ -0.62
ZNF549-202ENST00000376233 TXNDC16Q9P2K2 825 aa11.2□□□□□ -0.62
ZNF549-202ENST00000376233 SCN7AQ01118 1682 aa11.2□□□□□ -0.62
ZNF549-202ENST00000376233 F8VP50 259 aa11.2□□□□□ -0.62
ZNF549-202ENST00000376233 NEBLO76041 1014 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms