RNA–Protein interactions for RNA: ENST00000375703.7

MSH5-201, Transcript of mutS homolog 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSH5, Length 2,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-201ENST00000375703 ARL2BPQ9Y2Y0 163 aa15.44■□□□□ 0.06
MSH5-201ENST00000375703 MAGEA4P43358 317 aa15.44■□□□□ 0.06
MSH5-201ENST00000375703 E2F5Q15329 346 aa15.44■□□□□ 0.06
MSH5-201ENST00000375703 ZFYVE27Q5T4F4 411 aa15.44■□□□□ 0.06
MSH5-201ENST00000375703 ANKS1BQ7Z6G8 1248 aa15.44■□□□□ 0.06
MSH5-201ENST00000375703 RELL1Q8IUW5 271 aa15.44■□□□□ 0.06
MSH5-201ENST00000375703 NIM1KQ8IY84 436 aa15.44■□□□□ 0.06
MSH5-201ENST00000375703 FEZF2Q8TBJ5 459 aa15.44■□□□□ 0.06
MSH5-201ENST00000375703 RBM15Q96T37 977 aaKnown RBP eCLIP15.44■□□□□ 0.064e-7■■■□□ 15.4
MSH5-201ENST00000375703 APOBEC3GQ9HC16 384 aaKnown RBP15.44■□□□□ 0.06
MSH5-201ENST00000375703 NOD2Q9HC29 1040 aa15.44■□□□□ 0.06
MSH5-201ENST00000375703 JPH1Q9HDC5 661 aaPredicted RBP15.44■□□□□ 0.06
MSH5-201ENST00000375703 MYOZ2Q9NPC6 264 aa15.44■□□□□ 0.06
MSH5-201ENST00000375703 KCNG1Q9UIX4 513 aa15.44■□□□□ 0.06
MSH5-201ENST00000375703 SCINQ9Y6U3 715 aa15.44■□□□□ 0.06
MSH5-201ENST00000375703 GJB6O95452 261 aa15.43■□□□□ 0.06
MSH5-201ENST00000375703 EZRP15311 586 aaKnown RBP15.43■□□□□ 0.06
MSH5-201ENST00000375703 IBSPP21815 317 aaPredicted RBP15.43■□□□□ 0.06
MSH5-201ENST00000375703 KLRC2P26717 231 aa15.43■□□□□ 0.06
MSH5-201ENST00000375703 ACTR2P61160 394 aa15.43■□□□□ 0.06
MSH5-201ENST00000375703 LMNB2Q03252 620 aa15.43■□□□□ 0.06
MSH5-201ENST00000375703 CXCL9Q07325 125 aa15.43■□□□□ 0.06
MSH5-201ENST00000375703 P3H1Q32P28 736 aa15.43■□□□□ 0.06
MSH5-201ENST00000375703 GALNTL6Q49A17 601 aa15.43■□□□□ 0.06
MSH5-201ENST00000375703 CRELD2Q6UXH1 353 aaPredicted RBP15.43■□□□□ 0.06
MSH5-201ENST00000375703 SEPT14Q6ZU15 432 aa15.43■□□□□ 0.06
MSH5-201ENST00000375703 PHF13Q86YI8 300 aaPredicted RBP15.43■□□□□ 0.06
MSH5-201ENST00000375703 GBP7Q8N8V2 638 aaPredicted RBP15.43■□□□□ 0.06
MSH5-201ENST00000375703 NSUN6Q8TEA1 469 aaKnown RBP15.43■□□□□ 0.06
MSH5-201ENST00000375703 ZBTB45Q96K62 511 aaPredicted RBP15.43■□□□□ 0.06
MSH5-201ENST00000375703 MAGEB18Q96M61 343 aa15.43■□□□□ 0.06
MSH5-201ENST00000375703 ECT2Q9H8V3 914 aa15.43■□□□□ 0.06
MSH5-201ENST00000375703 GEMIN8Q9NWZ8 242 aaKnown RBP15.43■□□□□ 0.06
MSH5-201ENST00000375703 PTPRJQ12913 1337 aa15.43■□□□□ 0.06
MSH5-201ENST00000375703 RGS20O76081 388 aa15.43■□□□□ 0.06
MSH5-201ENST00000375703 NFX1Q12986 1120 aaKnown RBP15.43■□□□□ 0.06
MSH5-201ENST00000375703 MKRN3Q13064 507 aaKnown RBP15.43■□□□□ 0.06
MSH5-201ENST00000375703 NEDD9Q14511 834 aa15.43■□□□□ 0.06
MSH5-201ENST00000375703 ZKSCAN8Q15776 578 aaPredicted RBP15.43■□□□□ 0.06
MSH5-201ENST00000375703 ATP13A4Q4VNC1 1196 aa15.43■□□□□ 0.06
MSH5-201ENST00000375703 KAZNQ674X7 775 aa15.43■□□□□ 0.06
MSH5-201ENST00000375703 CYP4F22Q6NT55 531 aa15.43■□□□□ 0.06
MSH5-201ENST00000375703 ABHD15Q6UXT9 468 aa15.43■□□□□ 0.06
MSH5-201ENST00000375703 ANKRD35Q8N283 1001 aa15.43■□□□□ 0.06
MSH5-201ENST00000375703 TEPSINQ96N21 525 aa15.43■□□□□ 0.06
MSH5-201ENST00000375703 PLCD4Q9BRC7 762 aa15.43■□□□□ 0.06
MSH5-201ENST00000375703 PARVAQ9NVD7 372 aa15.43■□□□□ 0.06
MSH5-201ENST00000375703 RBAKQ9NYW8 714 aaPredicted RBP15.43■□□□□ 0.06
MSH5-201ENST00000375703 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.43■□□□□ 0.06
MSH5-201ENST00000375703 STYXL1Q9Y6J8 313 aa15.43■□□□□ 0.06
MSH5-201ENST00000375703 RASA4BC9J798 803 aa15.42■□□□□ 0.06
MSH5-201ENST00000375703 RASA4O43374 803 aa15.42■□□□□ 0.06
MSH5-201ENST00000375703 POLGP54098 1239 aaPredicted RBP15.42■□□□□ 0.06
MSH5-201ENST00000375703 C1QBPQ07021 282 aaKnown RBP15.42■□□□□ 0.06
MSH5-201ENST00000375703 CEP128Q6ZU80 1094 aa15.42■□□□□ 0.06
MSH5-201ENST00000375703 RCOR2Q8IZ40 523 aa15.42■□□□□ 0.06
MSH5-201ENST00000375703 RBBP8NLQ8NC74 664 aaPredicted RBP15.42■□□□□ 0.06
MSH5-201ENST00000375703 TMEM143Q96AN5 459 aa15.42■□□□□ 0.06
MSH5-201ENST00000375703 FOXP3Q9BZS1 431 aa15.42■□□□□ 0.06
MSH5-201ENST00000375703 HAPLN2Q9GZV7 340 aa15.42■□□□□ 0.06
MSH5-201ENST00000375703 ACTL7BQ9Y614 415 aa15.42■□□□□ 0.06
MSH5-201ENST00000375703 ZNF541Q9H0D2 1346 aa15.42■□□□□ 0.06
MSH5-201ENST00000375703 COL4A5P29400 1685 aa15.42■□□□□ 0.06
MSH5-201ENST00000375703 PI4K2BG5E9Z4 385 aa15.42■□□□□ 0.06
MSH5-201ENST00000375703 K7ERI5 159 aa15.42■□□□□ 0.06
MSH5-201ENST00000375703 KRT10P13645 584 aa15.42■□□□□ 0.06
MSH5-201ENST00000375703 NQO1P15559 274 aaKnown RBP15.42■□□□□ 0.06
MSH5-201ENST00000375703 NCALDP61601 193 aa15.42■□□□□ 0.06
MSH5-201ENST00000375703 XKR3Q5GH77 459 aa15.42■□□□□ 0.06
MSH5-201ENST00000375703 SLFN12LQ6IEE8 588 aa15.42■□□□□ 0.06
MSH5-201ENST00000375703 PPP1R21Q6ZMI0 780 aa15.42■□□□□ 0.06
MSH5-201ENST00000375703 RPAINQ86UA6 219 aa15.42■□□□□ 0.06
MSH5-201ENST00000375703 ZCCHC9Q8N567 271 aaKnown RBP15.42■□□□□ 0.06
MSH5-201ENST00000375703 TACO1Q9BSH4 297 aaKnown RBP15.42■□□□□ 0.06
MSH5-201ENST00000375703 KLHL11Q9NVR0 708 aa15.42■□□□□ 0.06
MSH5-201ENST00000375703 PRKAG3Q9UGI9 489 aa15.42■□□□□ 0.06
MSH5-201ENST00000375703 IP6K2Q9UHH9 426 aa15.42■□□□□ 0.06
MSH5-201ENST00000375703 ZNF148Q9UQR1 794 aa15.42■□□□□ 0.06
MSH5-201ENST00000375703 PSME4Q14997 1843 aa15.42■□□□□ 0.06
MSH5-201ENST00000375703 COPS2P61201 443 aa15.41■□□□□ 0.06
MSH5-201ENST00000375703 BNIP1Q12981 228 aa15.41■□□□□ 0.06
MSH5-201ENST00000375703 RIPK1Q13546 671 aa15.41■□□□□ 0.06
MSH5-201ENST00000375703 EMC2Q15006 297 aa15.41■□□□□ 0.06
MSH5-201ENST00000375703 SNRNP48Q6IEG0 339 aaKnown RBP15.41■□□□□ 0.06
MSH5-201ENST00000375703 MIS18BP1Q6P0N0 1132 aa15.41■□□□□ 0.06
MSH5-201ENST00000375703 GIMAP7Q8NHV1 300 aa15.41■□□□□ 0.06
MSH5-201ENST00000375703 TBC1D31Q96DN5 1066 aa15.41■□□□□ 0.06
MSH5-201ENST00000375703 CFAP57Q96MR6 1250 aa15.41■□□□□ 0.06
MSH5-201ENST00000375703 SAYSD1Q9NPB0 183 aa15.41■□□□□ 0.06
MSH5-201ENST00000375703 GINM1Q9NU53 330 aa15.41■□□□□ 0.06
MSH5-201ENST00000375703 MCM8Q9UJA3 840 aa15.41■□□□□ 0.06
MSH5-201ENST00000375703 NUB1Q9Y5A7 615 aa15.41■□□□□ 0.06
MSH5-201ENST00000375703 NFASCO94856 1347 aa15.41■□□□□ 0.06
MSH5-201ENST00000375703 LDHAP00338 332 aaKnown RBP15.41■□□□□ 0.06
MSH5-201ENST00000375703 TBXAS1P24557 533 aaPredicted RBP15.41■□□□□ 0.06
MSH5-201ENST00000375703 RPL7AP62424 266 aaKnown RBP15.41■□□□□ 0.06
MSH5-201ENST00000375703 KCNJ2P63252 427 aa15.41■□□□□ 0.06
MSH5-201ENST00000375703 TMED2Q15363 201 aa15.41■□□□□ 0.06
MSH5-201ENST00000375703 PPP1R2P3Q6NXS1 205 aa15.41■□□□□ 0.06
MSH5-201ENST00000375703 FITM2Q8N6M3 262 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms