RNA–Protein interactions for RNA: ENST00000374949.2

HLA-DQA1-202, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQA1, Length 1,060 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-202ENST00000374949 IFT122Q9HBG6 1241 aa11.86□□□□□ -0.51
HLA-DQA1-202ENST00000374949 METTL14Q9HCE5 456 aaKnown RBP11.86□□□□□ -0.51
HLA-DQA1-202ENST00000374949 MAN1C1Q9NR34 630 aa11.86□□□□□ -0.51
HLA-DQA1-202ENST00000374949 IMPACTQ9P2X3 320 aa11.86□□□□□ -0.51
HLA-DQA1-202ENST00000374949 PRG3Q9Y2Y8 225 aaPredicted RBP11.86□□□□□ -0.51
HLA-DQA1-202ENST00000374949 ZMYM2Q9UBW7 1377 aa11.86□□□□□ -0.51
HLA-DQA1-202ENST00000374949 PHLPP2Q6ZVD8 1323 aa11.86□□□□□ -0.51
HLA-DQA1-202ENST00000374949 DCHS1Q96JQ0 3298 aa11.85□□□□□ -0.51
HLA-DQA1-202ENST00000374949 PES1O00541 588 aaKnown RBP11.85□□□□□ -0.51
HLA-DQA1-202ENST00000374949 TEX33O43247 280 aa11.85□□□□□ -0.51
HLA-DQA1-202ENST00000374949 ZNF623O75123 536 aa11.85□□□□□ -0.51
HLA-DQA1-202ENST00000374949 POMCP01189 267 aa11.85□□□□□ -0.51
HLA-DQA1-202ENST00000374949 URODP06132 367 aa11.85□□□□□ -0.51
HLA-DQA1-202ENST00000374949 CFHP08603 1231 aa11.85□□□□□ -0.51
HLA-DQA1-202ENST00000374949 EPB41P11171 864 aaKnown RBP11.85□□□□□ -0.51
HLA-DQA1-202ENST00000374949 GBP2P32456 591 aaPredicted RBP11.85□□□□□ -0.51
HLA-DQA1-202ENST00000374949 CDC42EP1Q00587 391 aa11.85□□□□□ -0.51
HLA-DQA1-202ENST00000374949 UBXN1Q04323 297 aa11.85□□□□□ -0.51
HLA-DQA1-202ENST00000374949 POU5F1BQ06416 359 aa11.85□□□□□ -0.51
HLA-DQA1-202ENST00000374949 MAN2A1Q16706 1144 aa11.85□□□□□ -0.51
HLA-DQA1-202ENST00000374949 VWA3BQ502W6 1294 aa11.85□□□□□ -0.51
HLA-DQA1-202ENST00000374949 UBXN11Q5T124 520 aa11.85□□□□□ -0.51
HLA-DQA1-202ENST00000374949 TMC6Q7Z403 805 aa11.85□□□□□ -0.51
HLA-DQA1-202ENST00000374949 ZBTB8OSQ8IWT0 167 aa11.85□□□□□ -0.51
HLA-DQA1-202ENST00000374949 DTWD2Q8NBA8 298 aa11.85□□□□□ -0.51
HLA-DQA1-202ENST00000374949 HERC2P3Q9BVR0 1158 aa11.85□□□□□ -0.51
HLA-DQA1-202ENST00000374949 IKZF4Q9H2S9 585 aa11.85□□□□□ -0.51
HLA-DQA1-202ENST00000374949 MINDY3Q9H8M7 445 aa11.85□□□□□ -0.51
HLA-DQA1-202ENST00000374949 MRPL17Q9NRX2 175 aaKnown RBP11.85□□□□□ -0.51
HLA-DQA1-202ENST00000374949 INTS13Q9NVM9 706 aa11.85□□□□□ -0.51
HLA-DQA1-202ENST00000374949 MARCH5Q9NX47 278 aa11.85□□□□□ -0.51
HLA-DQA1-202ENST00000374949 ARMCX3Q9UH62 379 aaPredicted RBP11.85□□□□□ -0.51
HLA-DQA1-202ENST00000374949 FRMD4BQ9Y2L6 1034 aa11.85□□□□□ -0.51
HLA-DQA1-202ENST00000374949 CLUHO75153 1309 aa11.85□□□□□ -0.51
HLA-DQA1-202ENST00000374949 LGALS16A8MUM7 142 aa11.84□□□□□ -0.51
HLA-DQA1-202ENST00000374949 ANKRD63C9JTQ0 380 aa11.84□□□□□ -0.51
HLA-DQA1-202ENST00000374949 F8W810 466 aa11.84□□□□□ -0.51
HLA-DQA1-202ENST00000374949 NRP1O14786 923 aa11.84□□□□□ -0.51
HLA-DQA1-202ENST00000374949 INPPL1O15357 1258 aa11.84□□□□□ -0.51
HLA-DQA1-202ENST00000374949 EXOC3O60645 756 aa11.84□□□□□ -0.51
HLA-DQA1-202ENST00000374949 LILRB3O75022 631 aa11.84□□□□□ -0.51
HLA-DQA1-202ENST00000374949 ID4P47928 161 aa11.84□□□□□ -0.51
HLA-DQA1-202ENST00000374949 CYP2J2P51589 502 aa11.84□□□□□ -0.51
HLA-DQA1-202ENST00000374949 PPP2R3AQ06190 1150 aa11.84□□□□□ -0.51
HLA-DQA1-202ENST00000374949 HS1BP3Q53T59 392 aa11.84□□□□□ -0.51
HLA-DQA1-202ENST00000374949 FKBP15Q5T1M5 1219 aa11.84□□□□□ -0.51
HLA-DQA1-202ENST00000374949 CEP135Q66GS9 1140 aa11.84□□□□□ -0.51
HLA-DQA1-202ENST00000374949 ARMCX5Q6P1M9 558 aa11.84□□□□□ -0.51
HLA-DQA1-202ENST00000374949 C15orf39Q6ZRI6 1047 aa11.84□□□□□ -0.51
HLA-DQA1-202ENST00000374949 TAS1R3Q7RTX0 852 aa11.84□□□□□ -0.51
HLA-DQA1-202ENST00000374949 RNF149Q8NC42 400 aa11.84□□□□□ -0.51
HLA-DQA1-202ENST00000374949 BICD1Q96G01 975 aa11.84□□□□□ -0.51
HLA-DQA1-202ENST00000374949 FAM193BQ96PV7 902 aaPredicted RBP11.84□□□□□ -0.51
HLA-DQA1-202ENST00000374949 TMEM175Q9BSA9 504 aa11.84□□□□□ -0.51
HLA-DQA1-202ENST00000374949 MKNK1Q9BUB5 465 aa11.84□□□□□ -0.51
HLA-DQA1-202ENST00000374949 NDST4Q9H3R1 872 aa11.84□□□□□ -0.51
HLA-DQA1-202ENST00000374949 PCIF1Q9H4Z3 704 aa11.84□□□□□ -0.51
HLA-DQA1-202ENST00000374949 CA14Q9ULX7 337 aa11.84□□□□□ -0.51
HLA-DQA1-202ENST00000374949 FAN1Q9Y2M0 1017 aa11.84□□□□□ -0.51
HLA-DQA1-202ENST00000374949 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.84□□□□□ -0.51
HLA-DQA1-202ENST00000374949 CNTNAP2Q9UHC6 1331 aa11.84□□□□□ -0.51
HLA-DQA1-202ENST00000374949 CEP250Q9BV73 2442 aa11.84□□□□□ -0.51
HLA-DQA1-202ENST00000374949 MYH11P35749 1972 aa11.83□□□□□ -0.52
HLA-DQA1-202ENST00000374949 CCDC195A0A1B0GUA6 201 aa11.83□□□□□ -0.52
HLA-DQA1-202ENST00000374949 KRBA1A5PL33 1030 aa11.83□□□□□ -0.52
HLA-DQA1-202ENST00000374949 STK25O00506 426 aa11.83□□□□□ -0.52
HLA-DQA1-202ENST00000374949 TEX28O15482 410 aa11.83□□□□□ -0.52
HLA-DQA1-202ENST00000374949 RFPL2O75678 378 aa11.83□□□□□ -0.52
HLA-DQA1-202ENST00000374949 AKAP3O75969 853 aa11.83□□□□□ -0.52
HLA-DQA1-202ENST00000374949 GLUD1P00367 558 aa11.83□□□□□ -0.52
HLA-DQA1-202ENST00000374949 PIGRP01833 764 aa11.83□□□□□ -0.52
HLA-DQA1-202ENST00000374949 SOD2P04179 222 aa11.83□□□□□ -0.52
HLA-DQA1-202ENST00000374949 ADH1AP07327 375 aa11.83□□□□□ -0.52
HLA-DQA1-202ENST00000374949 GARTP22102 1010 aa11.83□□□□□ -0.52
HLA-DQA1-202ENST00000374949 RFX1P22670 979 aa11.83□□□□□ -0.52
HLA-DQA1-202ENST00000374949 PBX1P40424 430 aa11.83□□□□□ -0.52
HLA-DQA1-202ENST00000374949 MLH1P40692 756 aa11.83□□□□□ -0.52
HLA-DQA1-202ENST00000374949 OR1G1P47890 313 aa11.83□□□□□ -0.52
HLA-DQA1-202ENST00000374949 GLUD2P49448 558 aa11.83□□□□□ -0.52
HLA-DQA1-202ENST00000374949 CASP4P49662 377 aa11.83□□□□□ -0.52
HLA-DQA1-202ENST00000374949 LIG4P49917 911 aa11.83□□□□□ -0.52
HLA-DQA1-202ENST00000374949 GSDMDP57764 484 aa11.83□□□□□ -0.52
HLA-DQA1-202ENST00000374949 PTENP60484 403 aa11.83□□□□□ -0.52
HLA-DQA1-202ENST00000374949 HSP90AA2PQ14568 343 aaPredicted RBP11.83□□□□□ -0.52
HLA-DQA1-202ENST00000374949 MIIPQ5JXC2 388 aa11.83□□□□□ -0.52
HLA-DQA1-202ENST00000374949 CDCA2Q69YH5 1023 aaPredicted RBP11.83□□□□□ -0.52
HLA-DQA1-202ENST00000374949 SPECC1LQ69YQ0 1117 aa11.83□□□□□ -0.52
HLA-DQA1-202ENST00000374949 SLFN12LQ6IEE8 588 aa11.83□□□□□ -0.52
HLA-DQA1-202ENST00000374949 TAS1R1Q7RTX1 841 aa11.83□□□□□ -0.52
HLA-DQA1-202ENST00000374949 CCDC186Q7Z3E2 898 aa11.83□□□□□ -0.52
HLA-DQA1-202ENST00000374949 MRPL10Q7Z7H8 261 aaKnown RBP11.83□□□□□ -0.52
HLA-DQA1-202ENST00000374949 TRIM59Q8IWR1 403 aa11.83□□□□□ -0.52
HLA-DQA1-202ENST00000374949 FAM186BQ8IYM0 893 aa11.83□□□□□ -0.52
HLA-DQA1-202ENST00000374949 XXYLT1Q8NBI6 393 aa11.83□□□□□ -0.52
HLA-DQA1-202ENST00000374949 CMASQ8NFW8 434 aaPredicted RBP11.83□□□□□ -0.52
HLA-DQA1-202ENST00000374949 RIN2Q8WYP3 895 aaPredicted RBP11.83□□□□□ -0.52
HLA-DQA1-202ENST00000374949 B3GALT6Q96L58 329 aa11.83□□□□□ -0.52
HLA-DQA1-202ENST00000374949 RPS6KC1Q96S38 1066 aa11.83□□□□□ -0.52
HLA-DQA1-202ENST00000374949 MYADMQ96S97 322 aa11.83□□□□□ -0.52
HLA-DQA1-202ENST00000374949 RTP3Q9BQQ7 232 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms