RNA–Protein interactions for RNA: ENST00000374877.7

CCDC40-203, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC40, Length 3,544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-203ENST00000374877 IZUMO3Q5VZ72 239 aa11.77□□□□□ -0.53
CCDC40-203ENST00000374877 GSTA5Q7RTV2 222 aa11.77□□□□□ -0.53
CCDC40-203ENST00000374877 KCTD17Q8N5Z5 321 aa11.77□□□□□ -0.53
CCDC40-203ENST00000374877 ZNF577Q9BSK1 485 aa11.77□□□□□ -0.53
CCDC40-203ENST00000374877 UNC45AQ9H3U1 944 aa11.77□□□□□ -0.53
CCDC40-203ENST00000374877 ZFATQ9P243 1243 aa11.77□□□□□ -0.53
CCDC40-203ENST00000374877 LARSQ9P2J5 1176 aaKnown RBP11.77□□□□□ -0.53
CCDC40-203ENST00000374877 LGALS13Q9UHV8 139 aa11.77□□□□□ -0.53
CCDC40-203ENST00000374877 CHKBQ9Y259 395 aa11.77□□□□□ -0.53
CCDC40-203ENST00000374877 AFG3L2Q9Y4W6 797 aa11.77□□□□□ -0.53
CCDC40-203ENST00000374877 CSADQ9Y600 493 aa11.77□□□□□ -0.53
CCDC40-203ENST00000374877 EXOC1LA0A1B0GW35 172 aa11.76□□□□□ -0.53
CCDC40-203ENST00000374877 MAPK13O15264 365 aa11.76□□□□□ -0.53
CCDC40-203ENST00000374877 WFS1O76024 890 aa11.76□□□□□ -0.53
CCDC40-203ENST00000374877 CAV1Q03135 178 aa11.76□□□□□ -0.53
CCDC40-203ENST00000374877 CCDC15Q0P6D6 951 aa11.76□□□□□ -0.53
CCDC40-203ENST00000374877 PPP2R5CQ13362 524 aa11.76□□□□□ -0.53
CCDC40-203ENST00000374877 STAT4Q14765 748 aa11.76□□□□□ -0.53
CCDC40-203ENST00000374877 TMEM63BQ5T3F8 832 aa11.76□□□□□ -0.53
CCDC40-203ENST00000374877 PADI6Q6TGC4 694 aa11.76□□□□□ -0.53
CCDC40-203ENST00000374877 ATL2Q8NHH9 583 aa11.76□□□□□ -0.53
CCDC40-203ENST00000374877 DHX38Q92620 1227 aaKnown RBP11.76□□□□□ -0.53
CCDC40-203ENST00000374877 LRMDAQ9H2I8 198 aa11.76□□□□□ -0.53
CCDC40-203ENST00000374877 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.76□□□□□ -0.53
CCDC40-203ENST00000374877 USH1CQ9Y6N9 552 aa11.76□□□□□ -0.53
CCDC40-203ENST00000374877 ZHX2Q9Y6X8 837 aa11.76□□□□□ -0.53
CCDC40-203ENST00000374877 P4HA2O15460 535 aa11.76□□□□□ -0.53
CCDC40-203ENST00000374877 PEX11AO75192 247 aa11.76□□□□□ -0.53
CCDC40-203ENST00000374877 CBX6O95503 412 aa11.76□□□□□ -0.53
CCDC40-203ENST00000374877 KRT15P19012 456 aa11.76□□□□□ -0.53
CCDC40-203ENST00000374877 CALB2P22676 271 aa11.76□□□□□ -0.53
CCDC40-203ENST00000374877 ALDH3A1P30838 453 aa11.76□□□□□ -0.53
CCDC40-203ENST00000374877 SSR1P43307 286 aaKnown RBP11.76□□□□□ -0.53
CCDC40-203ENST00000374877 CDR2Q01850 454 aa11.76□□□□□ -0.53
CCDC40-203ENST00000374877 EAPPQ56P03 285 aaPredicted RBP11.76□□□□□ -0.53
CCDC40-203ENST00000374877 SYDE1Q6ZW31 735 aaPredicted RBP11.76□□□□□ -0.53
CCDC40-203ENST00000374877 LONP2Q86WA8 852 aa11.76□□□□□ -0.53
CCDC40-203ENST00000374877 C4orf33Q8N1A6 199 aa11.76□□□□□ -0.53
CCDC40-203ENST00000374877 AGGF1Q8N302 714 aaeCLIP11.76□□□□□ -0.53
CCDC40-203ENST00000374877 FAM13CQ8NE31 585 aa11.76□□□□□ -0.53
CCDC40-203ENST00000374877 SEMA4DQ92854 862 aa11.76□□□□□ -0.53
CCDC40-203ENST00000374877 SORBS3O60504 671 aa11.76□□□□□ -0.53
CCDC40-203ENST00000374877 TCEA3O75764 348 aa11.76□□□□□ -0.53
CCDC40-203ENST00000374877 RALAP11233 206 aa11.76□□□□□ -0.53
CCDC40-203ENST00000374877 EPHB2P29323 1055 aa11.76□□□□□ -0.53
CCDC40-203ENST00000374877 VGLL4Q14135 290 aa11.76□□□□□ -0.53
CCDC40-203ENST00000374877 CCDC174Q6PII3 467 aa11.76□□□□□ -0.53
CCDC40-203ENST00000374877 ANKRD13AQ8IZ07 590 aa11.76□□□□□ -0.53
CCDC40-203ENST00000374877 MAIP1Q8WWC4 291 aa11.76□□□□□ -0.53
CCDC40-203ENST00000374877 ACCSQ96QU6 501 aa11.76□□□□□ -0.53
CCDC40-203ENST00000374877 RBM15Q96T37 977 aaKnown RBP eCLIP11.76□□□□□ -0.53
CCDC40-203ENST00000374877 TMEM206Q9H813 350 aa11.76□□□□□ -0.53
CCDC40-203ENST00000374877 ATP5HO75947 161 aa11.75□□□□□ -0.53
CCDC40-203ENST00000374877 ARP10275 920 aa11.75□□□□□ -0.53
CCDC40-203ENST00000374877 PARP6Q2NL67 630 aa11.75□□□□□ -0.53
CCDC40-203ENST00000374877 ACAD10Q6JQN1 1059 aa11.75□□□□□ -0.53
CCDC40-203ENST00000374877 LLGL2Q6P1M3 1020 aa11.75□□□□□ -0.53
CCDC40-203ENST00000374877 STK32AQ8WU08 396 aa11.75□□□□□ -0.53
CCDC40-203ENST00000374877 SHC3Q92529 594 aa11.75□□□□□ -0.53
CCDC40-203ENST00000374877 TBC1D10AQ9BXI6 508 aa11.75□□□□□ -0.53
CCDC40-203ENST00000374877 SAYSD1Q9NPB0 183 aa11.75□□□□□ -0.53
CCDC40-203ENST00000374877 CYP39A1Q9NYL5 469 aa11.75□□□□□ -0.53
CCDC40-203ENST00000374877 KCND2Q9NZV8 630 aa11.75□□□□□ -0.53
CCDC40-203ENST00000374877 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.75□□□□□ -0.53
CCDC40-203ENST00000374877 PHIPQ8WWQ0 1821 aa11.75□□□□□ -0.53
CCDC40-203ENST00000374877 SMCHD1A6NHR9 2005 aa11.75□□□□□ -0.53
CCDC40-203ENST00000374877 PIK3CDO00329 1044 aa11.75□□□□□ -0.53
CCDC40-203ENST00000374877 LIN7AO14910 233 aaPredicted RBP11.75□□□□□ -0.53
CCDC40-203ENST00000374877 LINGO3P0C6S8 592 aa11.75□□□□□ -0.53
CCDC40-203ENST00000374877 GM2AP17900 193 aa11.75□□□□□ -0.53
CCDC40-203ENST00000374877 MAGEA4P43358 317 aa11.75□□□□□ -0.53
CCDC40-203ENST00000374877 CCNG1P51959 295 aa11.75□□□□□ -0.53
CCDC40-203ENST00000374877 MYBPC2Q14324 1141 aa11.75□□□□□ -0.53
CCDC40-203ENST00000374877 SPARCL1Q14515 664 aa11.75□□□□□ -0.53
CCDC40-203ENST00000374877 LMNTD2Q8IXW0 634 aa11.75□□□□□ -0.53
CCDC40-203ENST00000374877 CCDC89Q8N998 374 aa11.75□□□□□ -0.53
CCDC40-203ENST00000374877 LRRC8CQ8TDW0 803 aa11.75□□□□□ -0.53
CCDC40-203ENST00000374877 STARD13Q9Y3M8 1113 aa11.75□□□□□ -0.53
CCDC40-203ENST00000374877 DCAF8L1A6NGE4 600 aa11.74□□□□□ -0.53
CCDC40-203ENST00000374877 KIF3CO14782 793 aa11.74□□□□□ -0.53
CCDC40-203ENST00000374877 ASMTLO95671 621 aa11.74□□□□□ -0.53
CCDC40-203ENST00000374877 ADRB2P07550 413 aa11.74□□□□□ -0.53
CCDC40-203ENST00000374877 TPBGLP0DKB5 382 aa11.74□□□□□ -0.53
CCDC40-203ENST00000374877 MYBL1P10243 752 aa11.74□□□□□ -0.53
CCDC40-203ENST00000374877 GNAZP19086 355 aa11.74□□□□□ -0.53
CCDC40-203ENST00000374877 CA4P22748 312 aa11.74□□□□□ -0.53
CCDC40-203ENST00000374877 CTCFP49711 727 aaPredicted RBP11.74□□□□□ -0.53
CCDC40-203ENST00000374877 YARSP54577 528 aaKnown RBP11.74□□□□□ -0.53
CCDC40-203ENST00000374877 SESN3P58005 492 aa11.74□□□□□ -0.53
CCDC40-203ENST00000374877 SARNPP82979 210 aaKnown RBP11.74□□□□□ -0.53
CCDC40-203ENST00000374877 CEP55Q53EZ4 464 aa11.74□□□□□ -0.53
CCDC40-203ENST00000374877 ZFYVE27Q5T4F4 411 aa11.74□□□□□ -0.53
CCDC40-203ENST00000374877 CBWD2Q8IUF1 395 aa11.74□□□□□ -0.53
CCDC40-203ENST00000374877 SPDYE1Q8NFV5 336 aaPredicted RBP11.74□□□□□ -0.53
CCDC40-203ENST00000374877 TTC8Q8TAM2 541 aa11.74□□□□□ -0.53
CCDC40-203ENST00000374877 KIFAP3Q92845 792 aa11.74□□□□□ -0.53
CCDC40-203ENST00000374877 ZBTB10Q96DT7 871 aa11.74□□□□□ -0.53
CCDC40-203ENST00000374877 STRA6Q9BX79 667 aa11.74□□□□□ -0.53
CCDC40-203ENST00000374877 WDR11Q9BZH6 1224 aa11.74□□□□□ -0.53
CCDC40-203ENST00000374877 TRABDQ9H4I3 376 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms