RNA–Protein interactions for RNA: ENST00000374747.9

NPLOC4-202, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2 BASIC

Gene NPLOC4, Length 5,538 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-202ENST00000374747 PHF20L1A8MW92 1017 aa12.9□□□□□ -0.34
NPLOC4-202ENST00000374747 SLC16A3O15427 465 aaKnown RBP12.9□□□□□ -0.34
NPLOC4-202ENST00000374747 TM4SF1P30408 202 aa12.9□□□□□ -0.34
NPLOC4-202ENST00000374747 LSP1P33241 339 aa12.9□□□□□ -0.34
NPLOC4-202ENST00000374747 PTPAQ15257 358 aa12.9□□□□□ -0.34
NPLOC4-202ENST00000374747 DACT2Q5SW24 774 aa12.9□□□□□ -0.34
NPLOC4-202ENST00000374747 TEX2Q8IWB9 1127 aa12.9□□□□□ -0.34
NPLOC4-202ENST00000374747 CNPY4Q8N129 248 aa12.9□□□□□ -0.34
NPLOC4-202ENST00000374747 IDI2Q9BXS1 227 aa12.9□□□□□ -0.34
NPLOC4-202ENST00000374747 ENO4A6NNW6 628 aa12.9□□□□□ -0.34
NPLOC4-202ENST00000374747 ATP6V1E1P36543 226 aa12.9□□□□□ -0.34
NPLOC4-202ENST00000374747 PMS1P54277 932 aaKnown RBP12.9□□□□□ -0.34
NPLOC4-202ENST00000374747 TMEM154Q6P9G4 183 aa12.9□□□□□ -0.34
NPLOC4-202ENST00000374747 TRPM8Q7Z2W7 1104 aa12.9□□□□□ -0.34
NPLOC4-202ENST00000374747 SZRD1Q7Z422 152 aa12.9□□□□□ -0.34
NPLOC4-202ENST00000374747 SEPT1Q8WYJ6 367 aa12.9□□□□□ -0.34
NPLOC4-202ENST00000374747 LZICQ8WZA0 190 aa12.9□□□□□ -0.34
NPLOC4-202ENST00000374747 EML4Q9HC35 981 aaKnown RBP12.9□□□□□ -0.34
NPLOC4-202ENST00000374747 TBC1D23Q9NUY8 699 aa12.9□□□□□ -0.34
NPLOC4-202ENST00000374747 PARVAQ9NVD7 372 aa12.9□□□□□ -0.34
NPLOC4-202ENST00000374747 LMCD1Q9NZU5 365 aa12.9□□□□□ -0.34
NPLOC4-202ENST00000374747 AURKCQ9UQB9 309 aa12.9□□□□□ -0.34
NPLOC4-202ENST00000374747 MYMKA6NI61 221 aa12.9□□□□□ -0.34
NPLOC4-202ENST00000374747 PHF2O75151 1096 aa12.9□□□□□ -0.34
NPLOC4-202ENST00000374747 SUPT3HO75486 399 aa12.9□□□□□ -0.34
NPLOC4-202ENST00000374747 GPC3P51654 580 aa12.9□□□□□ -0.34
NPLOC4-202ENST00000374747 LBRQ14739 615 aaKnown RBP12.9□□□□□ -0.34
NPLOC4-202ENST00000374747 SLC18A3Q16572 532 aa12.9□□□□□ -0.34
NPLOC4-202ENST00000374747 USP6NLQ92738 828 aa12.9□□□□□ -0.34
NPLOC4-202ENST00000374747 AGPAT1Q99943 283 aa12.9□□□□□ -0.34
NPLOC4-202ENST00000374747 RIOX1Q9H6W3 641 aa12.9□□□□□ -0.34
NPLOC4-202ENST00000374747 ALG13Q9NP73 1137 aaKnown RBP12.9□□□□□ -0.34
NPLOC4-202ENST00000374747 LRRC4BQ9NT99 713 aa12.9□□□□□ -0.34
NPLOC4-202ENST00000374747 ABCC6O95255 1503 aa12.9□□□□□ -0.34
NPLOC4-202ENST00000374747 CETPP11597 493 aa12.9□□□□□ -0.34
NPLOC4-202ENST00000374747 DDIASQ8IXT1 998 aa12.9□□□□□ -0.34
NPLOC4-202ENST00000374747 GPD1LQ8N335 351 aa12.9□□□□□ -0.34
NPLOC4-202ENST00000374747 DNAJC9Q8WXX5 260 aa12.9□□□□□ -0.34
NPLOC4-202ENST00000374747 SEC24DO94855 1032 aaPredicted RBP12.9□□□□□ -0.35
NPLOC4-202ENST00000374747 AP3M2P53677 418 aa12.9□□□□□ -0.35
NPLOC4-202ENST00000374747 CYFIP1Q7L576 1253 aa12.9□□□□□ -0.35
NPLOC4-202ENST00000374747 RDM1Q8NG50 284 aa12.9□□□□□ -0.35
NPLOC4-202ENST00000374747 KCNK16Q96T55 309 aa12.9□□□□□ -0.35
NPLOC4-202ENST00000374747 ASCC2Q9H1I8 757 aaPredicted RBP12.9□□□□□ -0.35
NPLOC4-202ENST00000374747 SCAF8Q9UPN6 1271 aaKnown RBP12.9□□□□□ -0.35
NPLOC4-202ENST00000374747 SSU72P8A0A1W2PR75 194 aa12.89□□□□□ -0.35
NPLOC4-202ENST00000374747 RTN2O75298 545 aa12.89□□□□□ -0.35
NPLOC4-202ENST00000374747 NFX1Q12986 1120 aaKnown RBP12.89□□□□□ -0.35
NPLOC4-202ENST00000374747 TBCCQ15814 346 aa12.89□□□□□ -0.35
NPLOC4-202ENST00000374747 LRRC31Q6UY01 552 aa12.89□□□□□ -0.35
NPLOC4-202ENST00000374747 REEP2Q9BRK0 252 aa12.89□□□□□ -0.35
NPLOC4-202ENST00000374747 MRIQ9BWK5 157 aa12.89□□□□□ -0.35
NPLOC4-202ENST00000374747 NPHS2Q9NP85 383 aa12.89□□□□□ -0.35
NPLOC4-202ENST00000374747 ZFATQ9P243 1243 aa12.89□□□□□ -0.35
NPLOC4-202ENST00000374747 C5P01031 1676 aa12.89□□□□□ -0.35
NPLOC4-202ENST00000374747 BNIP3LO60238 219 aa12.89□□□□□ -0.35
NPLOC4-202ENST00000374747 ZNF189O75820 626 aaPredicted RBP12.89□□□□□ -0.35
NPLOC4-202ENST00000374747 SHMT1P34896 483 aa12.89□□□□□ -0.35
NPLOC4-202ENST00000374747 MRPS35P82673 323 aaKnown RBP12.89□□□□□ -0.35
NPLOC4-202ENST00000374747 CCDC85BQ15834 202 aaPredicted RBP12.89□□□□□ -0.35
NPLOC4-202ENST00000374747 ANKS1AQ92625 1134 aa12.89□□□□□ -0.35
NPLOC4-202ENST00000374747 MS4A14Q96JA4 679 aa12.89□□□□□ -0.35
NPLOC4-202ENST00000374747 CHP1Q99653 195 aa12.89□□□□□ -0.35
NPLOC4-202ENST00000374747 PPCSQ9HAB8 311 aa12.89□□□□□ -0.35
NPLOC4-202ENST00000374747 C16orf96A6NNT2 1141 aa12.89□□□□□ -0.35
NPLOC4-202ENST00000374747 E5RI56 91 aa12.89□□□□□ -0.35
NPLOC4-202ENST00000374747 ITIH2P19823 946 aa12.89□□□□□ -0.35
NPLOC4-202ENST00000374747 NMT1P30419 496 aaKnown RBP12.89□□□□□ -0.35
NPLOC4-202ENST00000374747 TAF1CQ15572 869 aaPredicted RBP12.89□□□□□ -0.35
NPLOC4-202ENST00000374747 KYAT1Q16773 422 aa12.89□□□□□ -0.35
NPLOC4-202ENST00000374747 TTC39CQ8N584 583 aa12.89□□□□□ -0.35
NPLOC4-202ENST00000374747 AGR3Q8TD06 166 aa12.89□□□□□ -0.35
NPLOC4-202ENST00000374747 ERP27Q96DN0 273 aa12.89□□□□□ -0.35
NPLOC4-202ENST00000374747 ADNPQ9H2P0 1102 aa12.89□□□□□ -0.35
NPLOC4-202ENST00000374747 CCDC134Q9H6E4 229 aa12.89□□□□□ -0.35
NPLOC4-202ENST00000374747 FAM47DPA6NHR8 397 aa12.89□□□□□ -0.35
NPLOC4-202ENST00000374747 TRIM49P0CI25 452 aa12.89□□□□□ -0.35
NPLOC4-202ENST00000374747 TRIM49CP0CI26 452 aa12.89□□□□□ -0.35
NPLOC4-202ENST00000374747 BACE1P56817 501 aa12.89□□□□□ -0.35
NPLOC4-202ENST00000374747 PRAMEP78395 509 aa12.89□□□□□ -0.35
NPLOC4-202ENST00000374747 DAB2IPQ5VWQ8 1189 aa12.89□□□□□ -0.35
NPLOC4-202ENST00000374747 ANKMY2Q8IV38 441 aa12.89□□□□□ -0.35
NPLOC4-202ENST00000374747 CYFIP2Q96F07 1278 aa12.89□□□□□ -0.35
NPLOC4-202ENST00000374747 TRIM51Q9BSJ1 452 aa12.89□□□□□ -0.35
NPLOC4-202ENST00000374747 EMSYQ7Z589 1322 aa12.88□□□□□ -0.35
NPLOC4-202ENST00000374747 TNPO2O14787 897 aaKnown RBP12.88□□□□□ -0.35
NPLOC4-202ENST00000374747 KRT8P05787 483 aa12.88□□□□□ -0.35
NPLOC4-202ENST00000374747 GRIN1Q05586 938 aa12.88□□□□□ -0.35
NPLOC4-202ENST00000374747 EFHC2Q5JST6 749 aa12.88□□□□□ -0.35
NPLOC4-202ENST00000374747 GPRASP2Q96D09 838 aa12.88□□□□□ -0.35
NPLOC4-202ENST00000374747 NR1H4Q96RI1 486 aaPredicted RBP12.88□□□□□ -0.35
NPLOC4-202ENST00000374747 MOV10L1Q9BXT6 1211 aaKnown RBP12.88□□□□□ -0.35
NPLOC4-202ENST00000374747 SMARCAD1Q9H4L7 1026 aa12.88□□□□□ -0.35
NPLOC4-202ENST00000374747 RUBCNLQ9H714 662 aa12.88□□□□□ -0.35
NPLOC4-202ENST00000374747 TRIM45Q9H8W5 580 aaPredicted RBP12.88□□□□□ -0.35
NPLOC4-202ENST00000374747 NPHP3-ACAD11A0A0J9YXS1 232 aa12.88□□□□□ -0.35
NPLOC4-202ENST00000374747 F5H423 210 aaPredicted RBP12.88□□□□□ -0.35
NPLOC4-202ENST00000374747 ANGPT2O15123 496 aa12.88□□□□□ -0.35
NPLOC4-202ENST00000374747 HUS1O60921 280 aa12.88□□□□□ -0.35
NPLOC4-202ENST00000374747 KCNA2P16389 499 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms