RNA–Protein interactions for RNA: ENST00000374481.7

CD28-202, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 4,526 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-202ENST00000374481 ITM2BQ9Y287 266 aa10.76□□□□□ -0.69
CD28-202ENST00000374481 ORC6Q9Y5N6 252 aa10.76□□□□□ -0.69
CD28-202ENST00000374481 PCDH11YQ9BZA8 1340 aa10.76□□□□□ -0.69
CD28-202ENST00000374481 GOLGA8IPA6NC78 632 aa10.76□□□□□ -0.69
CD28-202ENST00000374481 TMEM247A6NEH6 219 aa10.76□□□□□ -0.69
CD28-202ENST00000374481 SLC9A1P19634 815 aa10.76□□□□□ -0.69
CD28-202ENST00000374481 SAT1P21673 171 aa10.76□□□□□ -0.69
CD28-202ENST00000374481 RCAN1P53805 252 aa10.76□□□□□ -0.69
CD28-202ENST00000374481 SPRED3Q2MJR0 410 aa10.76□□□□□ -0.69
CD28-202ENST00000374481 C16orf89Q6UX73 402 aa10.76□□□□□ -0.69
CD28-202ENST00000374481 RNF25Q96BH1 459 aaPredicted RBP10.76□□□□□ -0.69
CD28-202ENST00000374481 TLCD1Q96CP7 247 aa10.76□□□□□ -0.69
CD28-202ENST00000374481 HSPBAP1Q96EW2 488 aa10.76□□□□□ -0.69
CD28-202ENST00000374481 STRBPQ96SI9 672 aaKnown RBP10.76□□□□□ -0.69
CD28-202ENST00000374481 RIOK1Q9BRS2 568 aaKnown RBP10.76□□□□□ -0.69
CD28-202ENST00000374481 CD209Q9NNX6 404 aa10.76□□□□□ -0.69
CD28-202ENST00000374481 GIN1Q9NXP7 522 aa10.76□□□□□ -0.69
CD28-202ENST00000374481 FADS3Q9Y5Q0 445 aa10.76□□□□□ -0.69
CD28-202ENST00000374481 WDR64B1ANS9 1081 aa10.76□□□□□ -0.69
CD28-202ENST00000374481 PLA2G4BP0C869 781 aa10.76□□□□□ -0.69
CD28-202ENST00000374481 COMTP21964 271 aa10.76□□□□□ -0.69
CD28-202ENST00000374481 YARSP54577 528 aaKnown RBP10.76□□□□□ -0.69
CD28-202ENST00000374481 CDK16Q00536 496 aa10.76□□□□□ -0.69
CD28-202ENST00000374481 FOLH1Q04609 750 aa10.76□□□□□ -0.69
CD28-202ENST00000374481 TRAF2Q12933 501 aa10.76□□□□□ -0.69
CD28-202ENST00000374481 MAPK11Q15759 364 aa10.76□□□□□ -0.69
CD28-202ENST00000374481 ITPRIPL1Q6GPH6 555 aa10.76□□□□□ -0.69
CD28-202ENST00000374481 RHPN2Q8IUC4 686 aa10.76□□□□□ -0.69
CD28-202ENST00000374481 TTC16Q8NEE8 873 aa10.76□□□□□ -0.69
CD28-202ENST00000374481 IGDCC4Q8TDY8 1250 aa10.76□□□□□ -0.69
CD28-202ENST00000374481 MRPL47Q9HD33 250 aaKnown RBP10.76□□□□□ -0.69
CD28-202ENST00000374481 WHRNQ9P202 907 aa10.76□□□□□ -0.69
CD28-202ENST00000374481 CIAO1O76071 339 aa10.75□□□□□ -0.69
CD28-202ENST00000374481 USP1O94782 785 aa10.75□□□□□ -0.69
CD28-202ENST00000374481 ST13P50502 369 aaKnown RBP10.75□□□□□ -0.69
CD28-202ENST00000374481 PERM1Q5SV97 790 aa10.75□□□□□ -0.69
CD28-202ENST00000374481 TLK2Q86UE8 772 aa10.75□□□□□ -0.69
CD28-202ENST00000374481 ZNF496Q96IT1 587 aaPredicted RBP10.75□□□□□ -0.69
CD28-202ENST00000374481 C7orf25Q9BPX7 421 aa10.75□□□□□ -0.69
CD28-202ENST00000374481 SENP2Q9HC62 589 aa10.75□□□□□ -0.69
CD28-202ENST00000374481 SMYD2Q9NRG4 433 aa10.75□□□□□ -0.69
CD28-202ENST00000374481 FIS1Q9Y3D6 152 aa10.75□□□□□ -0.69
CD28-202ENST00000374481 STK24Q9Y6E0 443 aa10.75□□□□□ -0.69
CD28-202ENST00000374481 C16orf96A6NNT2 1141 aa10.75□□□□□ -0.69
CD28-202ENST00000374481 BIRC5O15392 142 aa10.75□□□□□ -0.69
CD28-202ENST00000374481 CYTH3O43739 400 aa10.75□□□□□ -0.69
CD28-202ENST00000374481 KLHL41O60662 606 aa10.75□□□□□ -0.69
CD28-202ENST00000374481 VCLP18206 1134 aa10.75□□□□□ -0.69
CD28-202ENST00000374481 PHKA1P46020 1223 aa10.75□□□□□ -0.69
CD28-202ENST00000374481 TBC1D16Q8TBP0 767 aa10.75□□□□□ -0.69
CD28-202ENST00000374481 TMA16Q96EY4 203 aaKnown RBP10.75□□□□□ -0.69
CD28-202ENST00000374481 NT5C1BQ96P26 610 aa10.75□□□□□ -0.69
CD28-202ENST00000374481 GPATCH1Q9BRR8 931 aaKnown RBP10.75□□□□□ -0.69
CD28-202ENST00000374481 USP20Q9Y2K6 914 aa10.75□□□□□ -0.69
CD28-202ENST00000374481 PCDHGA4Q9Y5G9 962 aa10.75□□□□□ -0.69
CD28-202ENST00000374481 UTYO14607 1347 aa10.75□□□□□ -0.69
CD28-202ENST00000374481 ADGRB3O60242 1522 aa10.75□□□□□ -0.69
CD28-202ENST00000374481 GJB6O95452 261 aa10.75□□□□□ -0.69
CD28-202ENST00000374481 IL10P22301 178 aa10.75□□□□□ -0.69
CD28-202ENST00000374481 CASP5P51878 434 aa10.75□□□□□ -0.69
CD28-202ENST00000374481 AQP5P55064 265 aa10.75□□□□□ -0.69
CD28-202ENST00000374481 ZBTB46Q86UZ6 589 aa10.75□□□□□ -0.69
CD28-202ENST00000374481 PHC3Q8NDX5 983 aa10.75□□□□□ -0.69
CD28-202ENST00000374481 ZNF317Q96PQ6 595 aaPredicted RBP10.75□□□□□ -0.69
CD28-202ENST00000374481 RNPEPQ9H4A4 650 aa10.75□□□□□ -0.69
CD28-202ENST00000374481 PALLDQ8WX93 1383 aa10.75□□□□□ -0.69
CD28-202ENST00000374481 KDM6AO15550 1401 aaPredicted RBP10.74□□□□□ -0.69
CD28-202ENST00000374481 A0A087WXM4 84 aa10.74□□□□□ -0.69
CD28-202ENST00000374481 BOLA2-SMG1P6H3BVE0 249 aa10.74□□□□□ -0.69
CD28-202ENST00000374481 MAP3K13O43283 966 aa10.74□□□□□ -0.69
CD28-202ENST00000374481 RRP1BQ14684 758 aaKnown RBP10.74□□□□□ -0.69
CD28-202ENST00000374481 MORF4L2Q15014 288 aa10.74□□□□□ -0.69
CD28-202ENST00000374481 CHI3L2Q15782 390 aa10.74□□□□□ -0.69
CD28-202ENST00000374481 KCTD19Q17RG1 926 aaPredicted RBP10.74□□□□□ -0.69
CD28-202ENST00000374481 TCHHL1Q5QJ38 904 aaPredicted RBP10.74□□□□□ -0.69
CD28-202ENST00000374481 LRRC8EQ6NSJ5 796 aa10.74□□□□□ -0.69
CD28-202ENST00000374481 DEFB107AQ8IZN7 70 aa10.74□□□□□ -0.69
CD28-202ENST00000374481 POU5F2Q8N7G0 328 aa10.74□□□□□ -0.69
CD28-202ENST00000374481 DEPDC1BQ8WUY9 529 aa10.74□□□□□ -0.69
CD28-202ENST00000374481 PHF20Q9BVI0 1012 aa10.74□□□□□ -0.69
CD28-202ENST00000374481 OSBPL10Q9BXB5 764 aa10.74□□□□□ -0.69
CD28-202ENST00000374481 C1orf112Q9NSG2 853 aa10.74□□□□□ -0.69
CD28-202ENST00000374481 C20orf96Q9NUD7 363 aaPredicted RBP10.74□□□□□ -0.69
CD28-202ENST00000374481 ATP7BP35670 1465 aa10.74□□□□□ -0.69
CD28-202ENST00000374481 RAB15P59190 212 aa10.74□□□□□ -0.69
CD28-202ENST00000374481 CYP4A11Q02928 519 aa10.74□□□□□ -0.69
CD28-202ENST00000374481 DNAAF5Q86Y56 855 aa10.74□□□□□ -0.69
CD28-202ENST00000374481 PLD3Q8IV08 490 aa10.74□□□□□ -0.69
CD28-202ENST00000374481 TPH2Q8IWU9 490 aa10.74□□□□□ -0.69
CD28-202ENST00000374481 SCFD2Q8WU76 684 aa10.74□□□□□ -0.69
CD28-202ENST00000374481 SENP7Q9BQF6 1050 aa10.74□□□□□ -0.69
CD28-202ENST00000374481 TRIM39Q9HCM9 518 aa10.74□□□□□ -0.69
CD28-202ENST00000374481 PHF8Q9UPP1 1060 aa10.74□□□□□ -0.69
CD28-202ENST00000374481 FLT1P17948 1338 aa10.74□□□□□ -0.69
CD28-202ENST00000374481 PCP4L1A6NKN8 68 aa10.74□□□□□ -0.69
CD28-202ENST00000374481 C2CD2LO14523 706 aa10.74□□□□□ -0.69
CD28-202ENST00000374481 TBX10O75333 385 aa10.74□□□□□ -0.69
CD28-202ENST00000374481 NR3C1P04150 777 aa10.74□□□□□ -0.69
CD28-202ENST00000374481 ALDH1A3P47895 512 aa10.74□□□□□ -0.69
CD28-202ENST00000374481 SLC12A2P55011 1212 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms