RNA–Protein interactions for RNA: ENST00000374199.8

PRPF4-202, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRPF4, Length 3,212 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-202ENST00000374199 DRG2P55039 364 aaKnown RBP13.41□□□□□ -0.26
PRPF4-202ENST00000374199 RPAINQ86UA6 219 aa13.41□□□□□ -0.26
PRPF4-202ENST00000374199 CYFIP2Q96F07 1278 aa13.41□□□□□ -0.26
PRPF4-202ENST00000374199 CFHR5Q9BXR6 569 aa13.41□□□□□ -0.26
PRPF4-202ENST00000374199 TXLNGYQ9BZA5 131 aa13.41□□□□□ -0.26
PRPF4-202ENST00000374199 CNTN3Q9P232 1028 aa13.41□□□□□ -0.26
PRPF4-202ENST00000374199 INO80B-WBP1J3KQ70 363 aa13.41□□□□□ -0.26
PRPF4-202ENST00000374199 AGPSO00116 658 aa13.41□□□□□ -0.26
PRPF4-202ENST00000374199 VTNP04004 478 aa13.41□□□□□ -0.26
PRPF4-202ENST00000374199 BIRC3Q13489 604 aa13.41□□□□□ -0.26
PRPF4-202ENST00000374199 JADE1Q6IE81 842 aa13.41□□□□□ -0.26
PRPF4-202ENST00000374199 TLK2Q86UE8 772 aa13.41□□□□□ -0.26
PRPF4-202ENST00000374199 C1orf131Q8NDD1 294 aaKnown RBP13.41□□□□□ -0.26
PRPF4-202ENST00000374199 ZNF653Q96CK0 615 aa13.41□□□□□ -0.26
PRPF4-202ENST00000374199 ANKRD36BP1Q96IX9 119 aa13.41□□□□□ -0.26
PRPF4-202ENST00000374199 NAP1L3Q99457 506 aaPredicted RBP13.41□□□□□ -0.26
PRPF4-202ENST00000374199 INO80BQ9C086 356 aaPredicted RBP13.41□□□□□ -0.26
PRPF4-202ENST00000374199 SDCBP2Q9H190 292 aa13.41□□□□□ -0.26
PRPF4-202ENST00000374199 RPF1Q9H9Y2 349 aaKnown RBP13.41□□□□□ -0.26
PRPF4-202ENST00000374199 CTTNBP2NLQ9P2B4 639 aa13.41□□□□□ -0.26
PRPF4-202ENST00000374199 H3BQF6 201 aa13.41□□□□□ -0.26
PRPF4-202ENST00000374199 CILPO75339 1184 aa13.41□□□□□ -0.26
PRPF4-202ENST00000374199 PTPN7P35236 360 aa13.41□□□□□ -0.26
PRPF4-202ENST00000374199 RGS2P41220 211 aa13.41□□□□□ -0.26
PRPF4-202ENST00000374199 PTGIRP43119 386 aa13.41□□□□□ -0.26
PRPF4-202ENST00000374199 TMEM270Q6UE05 265 aa13.41□□□□□ -0.26
PRPF4-202ENST00000374199 CASKIN2Q8WXE0 1202 aa13.41□□□□□ -0.26
PRPF4-202ENST00000374199 DDX27Q96GQ7 796 aaKnown RBP13.41□□□□□ -0.26
PRPF4-202ENST00000374199 SNX27Q96L92 541 aa13.41□□□□□ -0.26
PRPF4-202ENST00000374199 CNOT8Q9UFF9 292 aaKnown RBP13.41□□□□□ -0.26
PRPF4-202ENST00000374199 FSCN2O14926 492 aa13.4□□□□□ -0.26
PRPF4-202ENST00000374199 ATMINO43313 823 aaPredicted RBP13.4□□□□□ -0.26
PRPF4-202ENST00000374199 CALCAP01258 141 aa13.4□□□□□ -0.26
PRPF4-202ENST00000374199 CYBAP13498 195 aa13.4□□□□□ -0.26
PRPF4-202ENST00000374199 KRT5P13647 590 aa13.4□□□□□ -0.26
PRPF4-202ENST00000374199 DARSP14868 501 aaKnown RBP13.4□□□□□ -0.26
PRPF4-202ENST00000374199 MARCKSL1P49006 195 aa13.4□□□□□ -0.26
PRPF4-202ENST00000374199 CPT1AP50416 773 aa13.4□□□□□ -0.26
PRPF4-202ENST00000374199 RAD23BP54727 409 aa13.4□□□□□ -0.26
PRPF4-202ENST00000374199 CUL1Q13616 776 aa13.4□□□□□ -0.26
PRPF4-202ENST00000374199 CCDC70Q6NSX1 233 aa13.4□□□□□ -0.26
PRPF4-202ENST00000374199 TRPV1Q8NER1 839 aa13.4□□□□□ -0.26
PRPF4-202ENST00000374199 NR2E1Q9Y466 385 aa13.4□□□□□ -0.26
PRPF4-202ENST00000374199 PCDHB4Q9Y5E5 795 aa13.4□□□□□ -0.26
PRPF4-202ENST00000374199 TRIP12Q14669 1992 aaPredicted RBP13.4□□□□□ -0.26
PRPF4-202ENST00000374199 A0A0U1RQG5 324 aaPredicted RBP13.4□□□□□ -0.26
PRPF4-202ENST00000374199 PROSCO94903 275 aa13.4□□□□□ -0.26
PRPF4-202ENST00000374199 TNNC2P02585 160 aa13.4□□□□□ -0.26
PRPF4-202ENST00000374199 ITGA4P13612 1032 aa13.4□□□□□ -0.26
PRPF4-202ENST00000374199 RRM1P23921 792 aa13.4□□□□□ -0.26
PRPF4-202ENST00000374199 KLF1Q13351 362 aaPredicted RBP13.4□□□□□ -0.26
PRPF4-202ENST00000374199 MFSD10Q14728 455 aa13.4□□□□□ -0.26
PRPF4-202ENST00000374199 SPDYCQ5MJ68 293 aa13.4□□□□□ -0.26
PRPF4-202ENST00000374199 RUFY4Q6ZNE9 571 aa13.4□□□□□ -0.26
PRPF4-202ENST00000374199 SESTD1Q86VW0 696 aa13.4□□□□□ -0.26
PRPF4-202ENST00000374199 IFT20Q8IY31 132 aa13.4□□□□□ -0.26
PRPF4-202ENST00000374199 TFAP2BQ92481 460 aa13.4□□□□□ -0.26
PRPF4-202ENST00000374199 SPDYE4A6NLX3 237 aa13.39□□□□□ -0.27
PRPF4-202ENST00000374199 SART1O43290 800 aaKnown RBP13.39□□□□□ -0.27
PRPF4-202ENST00000374199 PSTPIP1O43586 416 aa13.39□□□□□ -0.27
PRPF4-202ENST00000374199 SYF2O95926 243 aaKnown RBP13.39□□□□□ -0.27
PRPF4-202ENST00000374199 ZNF157P51786 506 aaPredicted RBP13.39□□□□□ -0.27
PRPF4-202ENST00000374199 GJA9P57773 515 aa13.39□□□□□ -0.27
PRPF4-202ENST00000374199 YWHAEP62258 255 aaKnown RBP13.39□□□□□ -0.27
PRPF4-202ENST00000374199 PURAQ00577 322 aaKnown RBP13.39□□□□□ -0.27
PRPF4-202ENST00000374199 ZNF252P-AS1Q0IIN9 211 aa13.39□□□□□ -0.27
PRPF4-202ENST00000374199 CCL14Q16627 93 aa13.39□□□□□ -0.27
PRPF4-202ENST00000374199 NME8Q8N427 588 aa13.39□□□□□ -0.27
PRPF4-202ENST00000374199 UBL4BQ8N7F7 174 aa13.39□□□□□ -0.27
PRPF4-202ENST00000374199 TMEM191CA6NGB0 347 aa13.39□□□□□ -0.27
PRPF4-202ENST00000374199 CEP104O60308 925 aa13.39□□□□□ -0.27
PRPF4-202ENST00000374199 TMEM191BP0C7N4 346 aa13.39□□□□□ -0.27
PRPF4-202ENST00000374199 USP8P40818 1118 aa13.39□□□□□ -0.27
PRPF4-202ENST00000374199 SMC1AQ14683 1233 aaKnown RBP13.39□□□□□ -0.27
PRPF4-202ENST00000374199 ZNF699Q32M78 642 aa13.39□□□□□ -0.27
PRPF4-202ENST00000374199 LRRC38Q5VT99 294 aa13.39□□□□□ -0.27
PRPF4-202ENST00000374199 SLC4A11Q8NBS3 891 aa13.39□□□□□ -0.27
PRPF4-202ENST00000374199 PIK3R5Q8WYR1 880 aa13.39□□□□□ -0.27
PRPF4-202ENST00000374199 KRT12Q99456 494 aa13.39□□□□□ -0.27
PRPF4-202ENST00000374199 IMPG2Q9BZV3 1241 aa13.39□□□□□ -0.27
PRPF4-202ENST00000374199 LRRC19Q9H756 370 aa13.39□□□□□ -0.27
PRPF4-202ENST00000374199 ERVK-5Q9HDB9 667 aa13.39□□□□□ -0.27
PRPF4-202ENST00000374199 MED4Q9NPJ6 270 aa13.39□□□□□ -0.27
PRPF4-202ENST00000374199 SCINQ9Y6U3 715 aa13.39□□□□□ -0.27
PRPF4-202ENST00000374199 HSPA9P38646 679 aaKnown RBP13.39□□□□□ -0.27
PRPF4-202ENST00000374199 RPL34P49207 117 aaKnown RBP13.39□□□□□ -0.27
PRPF4-202ENST00000374199 PSEN2P49810 448 aa13.39□□□□□ -0.27
PRPF4-202ENST00000374199 DHX34Q14147 1143 aaKnown RBP13.39□□□□□ -0.27
PRPF4-202ENST00000374199 TAF1CQ15572 869 aaPredicted RBP13.39□□□□□ -0.27
PRPF4-202ENST00000374199 UBXN11Q5T124 520 aa13.39□□□□□ -0.27
PRPF4-202ENST00000374199 DUPD1Q68J44 220 aa13.39□□□□□ -0.27
PRPF4-202ENST00000374199 CPNE8Q86YQ8 564 aa13.39□□□□□ -0.27
PRPF4-202ENST00000374199 TTC39CQ8N584 583 aa13.39□□□□□ -0.27
PRPF4-202ENST00000374199 PRELID2Q8N945 189 aa13.39□□□□□ -0.27
PRPF4-202ENST00000374199 CPA5Q8WXQ8 436 aa13.39□□□□□ -0.27
PRPF4-202ENST00000374199 CPB2Q96IY4 423 aa13.39□□□□□ -0.27
PRPF4-202ENST00000374199 AKT3Q9Y243 479 aa13.39□□□□□ -0.27
PRPF4-202ENST00000374199 KPNA6O60684 536 aa13.38□□□□□ -0.27
PRPF4-202ENST00000374199 HEXIM1O94992 359 aaKnown RBP13.38□□□□□ -0.27
PRPF4-202ENST00000374199 FGGP02679 453 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms