RNA–Protein interactions for RNA: ENST00000374198.4

PRPF4-201, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRPF4, Length 2,787 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-201ENST00000374198 USP29Q9HBJ7 922 aa13.65□□□□□ -0.22
PRPF4-201ENST00000374198 FBXO6Q9NRD1 293 aaPredicted RBP13.65□□□□□ -0.22
PRPF4-201ENST00000374198 DDX18Q9NVP1 670 aaKnown RBP13.65□□□□□ -0.22
PRPF4-201ENST00000374198 ARHGEF38Q9NXL2 777 aa13.65□□□□□ -0.22
PRPF4-201ENST00000374198 SENP1Q9P0U3 644 aa13.65□□□□□ -0.22
PRPF4-201ENST00000374198 TRMT112Q9UI30 125 aaKnown RBP13.65□□□□□ -0.22
PRPF4-201ENST00000374198 PPM1HQ9ULR3 514 aa13.65□□□□□ -0.22
PRPF4-201ENST00000374198 TYROBPO43914 113 aa13.65□□□□□ -0.22
PRPF4-201ENST00000374198 TDP2O95551 362 aa13.65□□□□□ -0.22
PRPF4-201ENST00000374198 ABHD2P08910 425 aa13.65□□□□□ -0.22
PRPF4-201ENST00000374198 CYP2D6P10635 497 aa13.65□□□□□ -0.22
PRPF4-201ENST00000374198 UQCRBP14927 111 aa13.65□□□□□ -0.22
PRPF4-201ENST00000374198 KRT15P19012 456 aa13.65□□□□□ -0.22
PRPF4-201ENST00000374198 TCEAL1Q15170 157 aa13.65□□□□□ -0.22
PRPF4-201ENST00000374198 USH1GQ495M9 461 aa13.65□□□□□ -0.22
PRPF4-201ENST00000374198 SGO2Q562F6 1265 aa13.65□□□□□ -0.22
PRPF4-201ENST00000374198 C6orf163Q5TEZ5 329 aa13.65□□□□□ -0.22
PRPF4-201ENST00000374198 CCDC110Q8TBZ0 833 aa13.65□□□□□ -0.22
PRPF4-201ENST00000374198 CORO1BQ9BR76 489 aa13.65□□□□□ -0.22
PRPF4-201ENST00000374198 TRIM55Q9BYV6 548 aa13.65□□□□□ -0.22
PRPF4-201ENST00000374198 TMEM260Q9NX78 707 aa13.65□□□□□ -0.22
PRPF4-201ENST00000374198 DNAJC12Q9UKB3 198 aa13.65□□□□□ -0.22
PRPF4-201ENST00000374198 MTMR7Q9Y216 660 aa13.65□□□□□ -0.22
PRPF4-201ENST00000374198 GSTTP1A0A1W2PQM5 241 aa13.64□□□□□ -0.23
PRPF4-201ENST00000374198 CIB2O75838 187 aa13.64□□□□□ -0.23
PRPF4-201ENST00000374198 ADCY8P40145 1251 aa13.64□□□□□ -0.23
PRPF4-201ENST00000374198 PIK3CAP42336 1068 aa13.64□□□□□ -0.23
PRPF4-201ENST00000374198 ERFP50548 548 aa13.64□□□□□ -0.23
PRPF4-201ENST00000374198 CASP5P51878 434 aa13.64□□□□□ -0.23
PRPF4-201ENST00000374198 ARFIP2P53365 341 aa13.64□□□□□ -0.23
PRPF4-201ENST00000374198 CDK16Q00536 496 aa13.64□□□□□ -0.23
PRPF4-201ENST00000374198 TFAP4Q01664 338 aa13.64□□□□□ -0.23
PRPF4-201ENST00000374198 KLHDC10Q6PID8 442 aa13.64□□□□□ -0.23
PRPF4-201ENST00000374198 C1orf228Q6PIY5 440 aa13.64□□□□□ -0.23
PRPF4-201ENST00000374198 REXO1Q8N1G1 1221 aaKnown RBP13.64□□□□□ -0.23
PRPF4-201ENST00000374198 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.64□□□□□ -0.23
PRPF4-201ENST00000374198 MORC4Q8TE76 937 aa13.64□□□□□ -0.23
PRPF4-201ENST00000374198 SIKE1Q9BRV8 207 aa13.64□□□□□ -0.23
PRPF4-201ENST00000374198 GPAMQ9HCL2 828 aa13.64□□□□□ -0.23
PRPF4-201ENST00000374198 INIPQ9NRY2 104 aa13.64□□□□□ -0.23
PRPF4-201ENST00000374198 E9PMD0 336 aa13.64□□□□□ -0.23
PRPF4-201ENST00000374198 PGM3O95394 542 aa13.64□□□□□ -0.23
PRPF4-201ENST00000374198 OXCT1P55809 520 aa13.64□□□□□ -0.23
PRPF4-201ENST00000374198 KNOP1Q1ED39 458 aaKnown RBP13.64□□□□□ -0.23
PRPF4-201ENST00000374198 TMCO4Q5TGY1 634 aa13.64□□□□□ -0.23
PRPF4-201ENST00000374198 CYP4F22Q6NT55 531 aa13.64□□□□□ -0.23
PRPF4-201ENST00000374198 GPBP1Q86WP2 473 aa13.64□□□□□ -0.23
PRPF4-201ENST00000374198 TDRPQ86YL5 185 aa13.64□□□□□ -0.23
PRPF4-201ENST00000374198 TMPRSS6Q8IU80 811 aa13.64□□□□□ -0.23
PRPF4-201ENST00000374198 PIP4K2CQ8TBX8 421 aa13.64□□□□□ -0.23
PRPF4-201ENST00000374198 GPR88Q9GZN0 384 aa13.64□□□□□ -0.23
PRPF4-201ENST00000374198 ZHX3Q9H4I2 956 aa13.64□□□□□ -0.23
PRPF4-201ENST00000374198 DCP1AQ9NPI6 582 aaPredicted RBP13.64□□□□□ -0.23
PRPF4-201ENST00000374198 ARHGEF4Q9NR80 690 aa13.64□□□□□ -0.23
PRPF4-201ENST00000374198 NIP7Q9Y221 180 aaKnown RBP eCLIP13.64□□□□□ -0.23
PRPF4-201ENST00000374198 MTO1Q9Y2Z2 717 aaKnown RBP13.64□□□□□ -0.23
PRPF4-201ENST00000374198 SCN7AQ01118 1682 aa13.63□□□□□ -0.23
PRPF4-201ENST00000374198 B2RBV5 119 aa13.63□□□□□ -0.23
PRPF4-201ENST00000374198 CLDN3O15551 220 aa13.63□□□□□ -0.23
PRPF4-201ENST00000374198 FTLP02792 175 aaPredicted RBP13.63□□□□□ -0.23
PRPF4-201ENST00000374198 VCLP18206 1134 aa13.63□□□□□ -0.23
PRPF4-201ENST00000374198 MLH1P40692 756 aa13.63□□□□□ -0.23
PRPF4-201ENST00000374198 CHN2P52757 468 aa13.63□□□□□ -0.23
PRPF4-201ENST00000374198 TBL3Q12788 808 aaKnown RBP13.63□□□□□ -0.23
PRPF4-201ENST00000374198 CCDC92Q53HC0 331 aaPredicted RBP13.63□□□□□ -0.23
PRPF4-201ENST00000374198 ADGRG6Q86SQ4 1221 aa13.63□□□□□ -0.23
PRPF4-201ENST00000374198 TBCCD1Q9NVR7 557 aa13.63□□□□□ -0.23
PRPF4-201ENST00000374198 FSCN2O14926 492 aa13.63□□□□□ -0.23
PRPF4-201ENST00000374198 AP1G1O43747 822 aa13.63□□□□□ -0.23
PRPF4-201ENST00000374198 CALUO43852 315 aaPredicted RBP13.63□□□□□ -0.23
PRPF4-201ENST00000374198 PLA2G4BP0C869 781 aa13.63□□□□□ -0.23
PRPF4-201ENST00000374198 RPL5P46777 297 aaKnown RBP13.63□□□□□ -0.23
PRPF4-201ENST00000374198 CASP4P49662 377 aa13.63□□□□□ -0.23
PRPF4-201ENST00000374198 SERPINB8P50452 374 aa13.63□□□□□ -0.23
PRPF4-201ENST00000374198 GPC5P78333 572 aa13.63□□□□□ -0.23
PRPF4-201ENST00000374198 PDK3Q15120 406 aa13.63□□□□□ -0.23
PRPF4-201ENST00000374198 LLGL1Q15334 1064 aa13.63□□□□□ -0.23
PRPF4-201ENST00000374198 SFT2D3Q587I9 215 aa13.63□□□□□ -0.23
PRPF4-201ENST00000374198 CLEC4GQ6UXB4 293 aa13.63□□□□□ -0.23
PRPF4-201ENST00000374198 ZBED8Q8IZ13 594 aa13.63□□□□□ -0.23
PRPF4-201ENST00000374198 CFAP57Q96MR6 1250 aa13.63□□□□□ -0.23
PRPF4-201ENST00000374198 MXD3Q9BW11 206 aa13.63□□□□□ -0.23
PRPF4-201ENST00000374198 BRD8Q9H0E9 1235 aa13.63□□□□□ -0.23
PRPF4-201ENST00000374198 CPVLQ9H3G5 476 aa13.63□□□□□ -0.23
PRPF4-201ENST00000374198 CHST7Q9NS84 486 aa13.63□□□□□ -0.23
PRPF4-201ENST00000374198 SPATA7Q9P0W8 599 aa13.63□□□□□ -0.23
PRPF4-201ENST00000374198 POC1B-GALNT4F8VUJ3 575 aa13.62□□□□□ -0.23
PRPF4-201ENST00000374198 STRNO43815 780 aa13.62□□□□□ -0.23
PRPF4-201ENST00000374198 EDIL3O43854 480 aa13.62□□□□□ -0.23
PRPF4-201ENST00000374198 ZBED4O75132 1171 aa13.62□□□□□ -0.23
PRPF4-201ENST00000374198 GOLGA8HP0CJ92 632 aa13.62□□□□□ -0.23
PRPF4-201ENST00000374198 SMIM18P0DKX4 95 aa13.62□□□□□ -0.23
PRPF4-201ENST00000374198 CYP11B2P19099 503 aa13.62□□□□□ -0.23
PRPF4-201ENST00000374198 HOXD13P35453 343 aa13.62□□□□□ -0.23
PRPF4-201ENST00000374198 MAGEA4P43358 317 aa13.62□□□□□ -0.23
PRPF4-201ENST00000374198 TGFB2P61812 414 aa13.62□□□□□ -0.23
PRPF4-201ENST00000374198 MSLNQ13421 630 aaPredicted RBP13.62□□□□□ -0.23
PRPF4-201ENST00000374198 TMEM120AQ9BXJ8 343 aa13.62□□□□□ -0.23
PRPF4-201ENST00000374198 KCNK13Q9HB14 408 aa13.62□□□□□ -0.23
PRPF4-201ENST00000374198 ZNF711Q9Y462 761 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms