RNA–Protein interactions for RNA: ENST00000372917.8

TRERF1-203, Transcript of transcriptional regulating factor 1, humanhuman

TSL 1 (best) BASIC

Gene TRERF1, Length 3,914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-203ENST00000372917 KLHL3Q9UH77 587 aa11.23□□□□□ -0.61
TRERF1-203ENST00000372917 SMIM18P0DKX4 95 aa11.23□□□□□ -0.61
TRERF1-203ENST00000372917 PMLP29590 882 aa11.23□□□□□ -0.61
TRERF1-203ENST00000372917 WEE1P30291 646 aa11.23□□□□□ -0.61
TRERF1-203ENST00000372917 FOXN2P32314 431 aa11.23□□□□□ -0.61
TRERF1-203ENST00000372917 COPB2P35606 906 aa11.23□□□□□ -0.61
TRERF1-203ENST00000372917 YWHAGP61981 247 aaKnown RBP eCLIP11.23□□□□□ -0.61
TRERF1-203ENST00000372917 CTDSPL2Q05D32 466 aa11.23□□□□□ -0.61
TRERF1-203ENST00000372917 ZNF174Q15697 407 aa11.23□□□□□ -0.61
TRERF1-203ENST00000372917 ANKRD20A4Q4UJ75 823 aa11.23□□□□□ -0.61
TRERF1-203ENST00000372917 CCDC58Q4VC31 144 aa11.23□□□□□ -0.61
TRERF1-203ENST00000372917 VSTM1Q6UX27 236 aa11.23□□□□□ -0.61
TRERF1-203ENST00000372917 TRIML2Q8N7C3 387 aa11.23□□□□□ -0.61
TRERF1-203ENST00000372917 ENAHQ8N8S7 591 aaPredicted RBP11.23□□□□□ -0.61
TRERF1-203ENST00000372917 GLMNQ92990 594 aa11.23□□□□□ -0.61
TRERF1-203ENST00000372917 PMEPA1Q969W9 287 aa11.23□□□□□ -0.61
TRERF1-203ENST00000372917 OTUD5Q96G74 571 aa11.23□□□□□ -0.61
TRERF1-203ENST00000372917 TMEM87BQ96K49 555 aa11.23□□□□□ -0.61
TRERF1-203ENST00000372917 ZHX3Q9H4I2 956 aa11.23□□□□□ -0.61
TRERF1-203ENST00000372917 NPHS2Q9NP85 383 aa11.23□□□□□ -0.61
TRERF1-203ENST00000372917 ARL8BQ9NVJ2 186 aa11.23□□□□□ -0.61
TRERF1-203ENST00000372917 ARPP21Q9UBL0 812 aaPredicted RBP11.23□□□□□ -0.61
TRERF1-203ENST00000372917 RABGEF1Q9UJ41 708 aa11.23□□□□□ -0.61
TRERF1-203ENST00000372917 TBX22Q9Y458 520 aa11.23□□□□□ -0.61
TRERF1-203ENST00000372917 WDR19Q8NEZ3 1342 aa11.22□□□□□ -0.61
TRERF1-203ENST00000372917 CAPN1P07384 714 aa11.22□□□□□ -0.61
TRERF1-203ENST00000372917 ADORA1P30542 326 aa11.22□□□□□ -0.61
TRERF1-203ENST00000372917 GJC2Q5T442 439 aaPredicted RBP11.22□□□□□ -0.61
TRERF1-203ENST00000372917 IRF2BP1Q8IU81 584 aa11.22□□□□□ -0.61
TRERF1-203ENST00000372917 DEPDC4Q8N2C3 294 aa11.22□□□□□ -0.61
TRERF1-203ENST00000372917 ICA1LQ8NDH6 482 aa11.22□□□□□ -0.61
TRERF1-203ENST00000372917 TOR1AIP2Q8NFQ8 470 aa11.22□□□□□ -0.61
TRERF1-203ENST00000372917 SCFD2Q8WU76 684 aa11.22□□□□□ -0.61
TRERF1-203ENST00000372917 SYMPKQ92797 1274 aaKnown RBP11.22□□□□□ -0.61
TRERF1-203ENST00000372917 PLEKHA8Q96JA3 519 aa11.22□□□□□ -0.61
TRERF1-203ENST00000372917 FAR2Q96K12 515 aa11.22□□□□□ -0.61
TRERF1-203ENST00000372917 EPB41L4BQ9H329 900 aa11.22□□□□□ -0.61
TRERF1-203ENST00000372917 DNAJC16Q9Y2G8 782 aa11.22□□□□□ -0.61
TRERF1-203ENST00000372917 SLC4A4Q9Y6R1 1079 aa11.22□□□□□ -0.61
TRERF1-203ENST00000372917 TRIM75PA6NK02 468 aa11.22□□□□□ -0.61
TRERF1-203ENST00000372917 LRRC53A6NM62 1247 aa11.22□□□□□ -0.61
TRERF1-203ENST00000372917 CCDC188H7C350 402 aa11.22□□□□□ -0.61
TRERF1-203ENST00000372917 EEF1GP26641 437 aaKnown RBP11.22□□□□□ -0.61
TRERF1-203ENST00000372917 ATP5DP30049 168 aa11.22□□□□□ -0.61
TRERF1-203ENST00000372917 RAB15P59190 212 aa11.22□□□□□ -0.61
TRERF1-203ENST00000372917 PDE4DQ08499 809 aa11.22□□□□□ -0.61
TRERF1-203ENST00000372917 TUBA3CQ13748 450 aa11.22□□□□□ -0.61
TRERF1-203ENST00000372917 GRM2Q14416 872 aa11.22□□□□□ -0.61
TRERF1-203ENST00000372917 KYNUQ16719 465 aa11.22□□□□□ -0.61
TRERF1-203ENST00000372917 TAS2R42Q7RTR8 314 aa11.22□□□□□ -0.61
TRERF1-203ENST00000372917 PDSS2Q86YH6 399 aa11.22□□□□□ -0.61
TRERF1-203ENST00000372917 MAGEB6Q8N7X4 407 aa11.22□□□□□ -0.61
TRERF1-203ENST00000372917 HIPK4Q8NE63 616 aa11.22□□□□□ -0.61
TRERF1-203ENST00000372917 SLC52A2Q9HAB3 445 aa11.22□□□□□ -0.61
TRERF1-203ENST00000372917 SLC38A7Q9NVC3 462 aa11.22□□□□□ -0.61
TRERF1-203ENST00000372917 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.22□□□□□ -0.61
TRERF1-203ENST00000372917 H7C0C1 242 aa11.22□□□□□ -0.61
TRERF1-203ENST00000372917 TRAFD1O14545 582 aaPredicted RBP11.22□□□□□ -0.61
TRERF1-203ENST00000372917 PARNO95453 639 aaKnown RBP11.22□□□□□ -0.61
TRERF1-203ENST00000372917 KRT13P13646 458 aa11.22□□□□□ -0.61
TRERF1-203ENST00000372917 MAP3K7CLP57077 242 aa11.22□□□□□ -0.61
TRERF1-203ENST00000372917 NUP107P57740 925 aa11.22□□□□□ -0.61
TRERF1-203ENST00000372917 MPP2Q14168 576 aa11.22□□□□□ -0.61
TRERF1-203ENST00000372917 TRIP10Q15642 601 aa11.22□□□□□ -0.61
TRERF1-203ENST00000372917 EDRF1Q3B7T1 1238 aa11.22□□□□□ -0.61
TRERF1-203ENST00000372917 BOLA3Q53S33 107 aa11.22□□□□□ -0.61
TRERF1-203ENST00000372917 RIPOR1Q6ZS17 1223 aa11.22□□□□□ -0.61
TRERF1-203ENST00000372917 CSGALNACT2Q8N6G5 542 aa11.22□□□□□ -0.61
TRERF1-203ENST00000372917 POU5F2Q8N7G0 328 aa11.22□□□□□ -0.61
TRERF1-203ENST00000372917 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.22□□□□□ -0.61
TRERF1-203ENST00000372917 BORCS5Q969J3 196 aa11.22□□□□□ -0.61
TRERF1-203ENST00000372917 CNBD2Q96M20 576 aa11.22□□□□□ -0.61
TRERF1-203ENST00000372917 CTRCQ99895 268 aa11.22□□□□□ -0.61
TRERF1-203ENST00000372917 STK39Q9UEW8 545 aa11.22□□□□□ -0.61
TRERF1-203ENST00000372917 MYH6P13533 1939 aa11.21□□□□□ -0.61
TRERF1-203ENST00000372917 SNTNA6NMZ2 147 aa11.21□□□□□ -0.61
TRERF1-203ENST00000372917 A8MXQ7 604 aa11.21□□□□□ -0.61
TRERF1-203ENST00000372917 CCRL2O00421 344 aa11.21□□□□□ -0.61
TRERF1-203ENST00000372917 XPO1O14980 1071 aaKnown RBP11.21□□□□□ -0.61
TRERF1-203ENST00000372917 ABCB1P08183 1280 aaPredicted RBP11.21□□□□□ -0.61
TRERF1-203ENST00000372917 CTAG1AP78358 180 aa11.21□□□□□ -0.61
TRERF1-203ENST00000372917 FOLH1Q04609 750 aa11.21□□□□□ -0.61
TRERF1-203ENST00000372917 ITIH5Q86UX2 942 aa11.21□□□□□ -0.61
TRERF1-203ENST00000372917 ZNF410Q86VK4 478 aa11.21□□□□□ -0.61
TRERF1-203ENST00000372917 LILRB1Q8NHL6 650 aaPredicted RBP11.21□□□□□ -0.61
TRERF1-203ENST00000372917 PLBD2Q8NHP8 589 aa11.21□□□□□ -0.61
TRERF1-203ENST00000372917 GLG1Q92896 1179 aa11.21□□□□□ -0.61
TRERF1-203ENST00000372917 EFHD2Q96C19 240 aaPredicted RBP11.21□□□□□ -0.61
TRERF1-203ENST00000372917 NSL1Q96IY1 281 aa11.21□□□□□ -0.61
TRERF1-203ENST00000372917 CRAMP1Q96RY5 1269 aa11.21□□□□□ -0.61
TRERF1-203ENST00000372917 TLE6Q9H808 572 aa11.21□□□□□ -0.61
TRERF1-203ENST00000372917 SEPT10Q9P0V9 454 aa11.21□□□□□ -0.61
TRERF1-203ENST00000372917 PLAGL2Q9UPG8 496 aa11.21□□□□□ -0.61
TRERF1-203ENST00000372917 NRXN3Q9Y4C0 1643 aa11.21□□□□□ -0.61
TRERF1-203ENST00000372917 HNRNPCL1O60812 293 aaKnown RBP11.21□□□□□ -0.61
TRERF1-203ENST00000372917 PRDM1O75626 825 aa11.21□□□□□ -0.61
TRERF1-203ENST00000372917 EIF2S1P05198 315 aaKnown RBP11.21□□□□□ -0.61
TRERF1-203ENST00000372917 CDH2P19022 906 aaPredicted RBP11.21□□□□□ -0.61
TRERF1-203ENST00000372917 TUBA3EQ6PEY2 450 aa11.21□□□□□ -0.61
TRERF1-203ENST00000372917 SNX29Q8TEQ0 813 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms