RNA–Protein interactions for RNA: ENST00000372755.7

VCL-202, Transcript of vinculin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCL, Length 6,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-202ENST00000372755 RBBP8NLQ8NC74 664 aaPredicted RBP12.08□□□□□ -0.48
VCL-202ENST00000372755 USP33Q8TEY7 942 aa12.08□□□□□ -0.48
VCL-202ENST00000372755 CCSER1Q9C0I3 900 aa12.08□□□□□ -0.48
VCL-202ENST00000372755 VIPAS39Q9H9C1 493 aa12.08□□□□□ -0.48
VCL-202ENST00000372755 KBTBD13C9JR72 458 aa12.08□□□□□ -0.48
VCL-202ENST00000372755 PPP1R37O75864 691 aa12.08□□□□□ -0.48
VCL-202ENST00000372755 ENO3P13929 434 aaPredicted RBP12.08□□□□□ -0.48
VCL-202ENST00000372755 SNRPFP62306 86 aaKnown RBP12.08□□□□□ -0.48
VCL-202ENST00000372755 NCOA4Q13772 614 aa12.08□□□□□ -0.48
VCL-202ENST00000372755 IER5Q5VY09 327 aa12.08□□□□□ -0.48
VCL-202ENST00000372755 VPS37AQ8NEZ2 397 aa12.08□□□□□ -0.48
VCL-202ENST00000372755 EME1Q96AY2 570 aa12.08□□□□□ -0.48
VCL-202ENST00000372755 RGL1Q9NZL6 768 aa12.08□□□□□ -0.48
VCL-202ENST00000372755 MTO1Q9Y2Z2 717 aaKnown RBP12.08□□□□□ -0.48
VCL-202ENST00000372755 COG2Q14746 738 aa12.08□□□□□ -0.48
VCL-202ENST00000372755 CPA5Q8WXQ8 436 aa12.08□□□□□ -0.48
VCL-202ENST00000372755 PABPC5Q96DU9 382 aaKnown RBP12.08□□□□□ -0.48
VCL-202ENST00000372755 SYNDIG1Q9H7V2 258 aa12.08□□□□□ -0.48
VCL-202ENST00000372755 ZSCAN32Q9NX65 697 aa12.08□□□□□ -0.48
VCL-202ENST00000372755 GH1P01241 217 aa12.08□□□□□ -0.48
VCL-202ENST00000372755 CHN1P15882 459 aa12.08□□□□□ -0.48
VCL-202ENST00000372755 PRKCQQ04759 706 aa12.08□□□□□ -0.48
VCL-202ENST00000372755 PTK6Q13882 451 aa12.08□□□□□ -0.48
VCL-202ENST00000372755 PTRHD1Q6GMV3 140 aaKnown RBP12.08□□□□□ -0.48
VCL-202ENST00000372755 LPAR1Q92633 364 aa12.08□□□□□ -0.48
VCL-202ENST00000372755 DTNBP1Q96EV8 351 aa12.08□□□□□ -0.48
VCL-202ENST00000372755 PRPF18Q99633 342 aaKnown RBP12.08□□□□□ -0.48
VCL-202ENST00000372755 C7orf25Q9BPX7 421 aa12.08□□□□□ -0.48
VCL-202ENST00000372755 LRRC1Q9BTT6 524 aa12.08□□□□□ -0.48
VCL-202ENST00000372755 NPHS2Q9NP85 383 aa12.08□□□□□ -0.48
VCL-202ENST00000372755 SCN3BQ9NY72 215 aa12.08□□□□□ -0.48
VCL-202ENST00000372755 USP15Q9Y4E8 981 aaPredicted RBP12.08□□□□□ -0.48
VCL-202ENST00000372755 POLBP06746 335 aa12.07□□□□□ -0.48
VCL-202ENST00000372755 FMO5P49326 533 aa12.07□□□□□ -0.48
VCL-202ENST00000372755 RGS7P49802 495 aa12.07□□□□□ -0.48
VCL-202ENST00000372755 HMGCS2P54868 508 aa12.07□□□□□ -0.48
VCL-202ENST00000372755 UBE3AQ05086 875 aa12.07□□□□□ -0.48
VCL-202ENST00000372755 AGBL2Q5U5Z8 902 aa12.07□□□□□ -0.48
VCL-202ENST00000372755 TTC39BQ5VTQ0 682 aaPredicted RBP12.07□□□□□ -0.48
VCL-202ENST00000372755 TRAPPC11Q7Z392 1133 aa12.07□□□□□ -0.48
VCL-202ENST00000372755 GTF3C2Q8WUA4 911 aaPredicted RBP12.07□□□□□ -0.48
VCL-202ENST00000372755 MCEEQ96PE7 176 aa12.07□□□□□ -0.48
VCL-202ENST00000372755 RBBP8Q99708 897 aa12.07□□□□□ -0.48
VCL-202ENST00000372755 C17orf80Q9BSJ5 609 aa12.07□□□□□ -0.48
VCL-202ENST00000372755 C20orf96Q9NUD7 363 aaPredicted RBP12.07□□□□□ -0.48
VCL-202ENST00000372755 ITIH6Q6UXX5 1313 aa12.07□□□□□ -0.48
VCL-202ENST00000372755 FAM47DPA6NHR8 397 aa12.07□□□□□ -0.48
VCL-202ENST00000372755 KCNK10P57789 538 aa12.07□□□□□ -0.48
VCL-202ENST00000372755 DEFA1P59665 94 aa12.07□□□□□ -0.48
VCL-202ENST00000372755 DEFA3P59666 94 aa12.07□□□□□ -0.48
VCL-202ENST00000372755 MDH1BQ5I0G3 518 aa12.07□□□□□ -0.48
VCL-202ENST00000372755 CYGBQ8WWM9 190 aa12.07□□□□□ -0.48
VCL-202ENST00000372755 PCMTD2Q9NV79 361 aa12.07□□□□□ -0.48
VCL-202ENST00000372755 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.07□□□□□ -0.48
VCL-202ENST00000372755 SH3BP1Q9Y3L3 701 aa12.07□□□□□ -0.48
VCL-202ENST00000372755 OVOS2A0A0G2JMS6 1433 aa12.07□□□□□ -0.48
VCL-202ENST00000372755 OVOS2A0A0J9YW53 1432 aa12.07□□□□□ -0.48
VCL-202ENST00000372755 OVOS2Q6IE36 1432 aa12.07□□□□□ -0.48
VCL-202ENST00000372755 NPHP3-ACAD11A0A0J9YXS1 232 aa12.07□□□□□ -0.48
VCL-202ENST00000372755 C19orf81C9J6K1 198 aa12.07□□□□□ -0.48
VCL-202ENST00000372755 MTSS1O43312 755 aa12.07□□□□□ -0.48
VCL-202ENST00000372755 CCDC15Q0P6D6 951 aa12.07□□□□□ -0.48
VCL-202ENST00000372755 PTK7Q13308 1070 aa12.07□□□□□ -0.48
VCL-202ENST00000372755 RSAD1Q9HA92 442 aa12.07□□□□□ -0.48
VCL-202ENST00000372755 FBXO2Q9UK22 296 aaPredicted RBP12.07□□□□□ -0.48
VCL-202ENST00000372755 SEPT1Q8WYJ6 367 aa12.07□□□□□ -0.48
VCL-202ENST00000372755 TRIM9Q9C026 710 aa12.07□□□□□ -0.48
VCL-202ENST00000372755 TMEM117Q9H0C3 514 aa12.07□□□□□ -0.48
VCL-202ENST00000372755 SLC9A1P19634 815 aa12.07□□□□□ -0.48
VCL-202ENST00000372755 GALCP54803 685 aa12.07□□□□□ -0.48
VCL-202ENST00000372755 ARMC6Q6NXE6 501 aa12.07□□□□□ -0.48
VCL-202ENST00000372755 SLC7A14Q8TBB6 771 aa12.07□□□□□ -0.48
VCL-202ENST00000372755 KIF28PB7ZC32 967 aa12.06□□□□□ -0.48
VCL-202ENST00000372755 ADCY3O60266 1144 aa12.06□□□□□ -0.48
VCL-202ENST00000372755 HMBSP08397 361 aa12.06□□□□□ -0.48
VCL-202ENST00000372755 SRGNP10124 158 aa12.06□□□□□ -0.48
VCL-202ENST00000372755 NCALDP61601 193 aa12.06□□□□□ -0.48
VCL-202ENST00000372755 CENPCQ03188 943 aa12.06□□□□□ -0.48
VCL-202ENST00000372755 MTMR2Q13614 643 aa12.06□□□□□ -0.48
VCL-202ENST00000372755 TP53BP2Q13625 1128 aa12.06□□□□□ -0.48
VCL-202ENST00000372755 SNRNP35Q16560 246 aaKnown RBP12.06□□□□□ -0.48
VCL-202ENST00000372755 DAB2IPQ5VWQ8 1189 aa12.06□□□□□ -0.48
VCL-202ENST00000372755 CDR2LQ86X02 465 aaPredicted RBP12.06□□□□□ -0.48
VCL-202ENST00000372755 RIBC1Q8N443 379 aaPredicted RBP12.06□□□□□ -0.48
VCL-202ENST00000372755 TEX13BQ9BXU2 312 aa12.06□□□□□ -0.48
VCL-202ENST00000372755 ROPN1BQ9BZX4 212 aaPredicted RBP12.06□□□□□ -0.48
VCL-202ENST00000372755 ROPN1Q9HAT0 212 aaPredicted RBP12.06□□□□□ -0.48
VCL-202ENST00000372755 ZNF711Q9Y462 761 aa12.06□□□□□ -0.48
VCL-202ENST00000372755 SNRPAP09012 282 aaKnown RBP12.06□□□□□ -0.48
VCL-202ENST00000372755 ITGA4P13612 1032 aa12.06□□□□□ -0.48
VCL-202ENST00000372755 PCSK1P29120 753 aa12.06□□□□□ -0.48
VCL-202ENST00000372755 HIST2H2ACQ16777 129 aaPredicted RBP12.06□□□□□ -0.48
VCL-202ENST00000372755 C12orf60Q5U649 245 aa12.06□□□□□ -0.48
VCL-202ENST00000372755 HIST2H2AA3Q6FI13 130 aa12.06□□□□□ -0.48
VCL-202ENST00000372755 PGBD3Q8N328 593 aa12.06□□□□□ -0.48
VCL-202ENST00000372755 SLC30A5Q8TAD4 765 aa12.06□□□□□ -0.48
VCL-202ENST00000372755 ZNF473Q8WTR7 871 aaKnown RBP12.06□□□□□ -0.48
VCL-202ENST00000372755 SLC24A3Q9HC58 644 aa12.06□□□□□ -0.48
VCL-202ENST00000372755 HNRNPCP07910 306 aaKnown RBP eCLIP12.06□□□□□ -0.48
VCL-202ENST00000372755 RARBP10826 455 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms