RNA–Protein interactions for RNA: ENST00000372459.6

CTSA-203, Transcript of cathepsin A, humanhuman

TSL 1 (best) BASIC

Gene CTSA, Length 1,972 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-203ENST00000372459 SCARA5Q6ZMJ2 495 aa26.66■■□□□ 1.86
CTSA-203ENST00000372459 MON1BQ7L1V2 547 aa26.66■■□□□ 1.86
CTSA-203ENST00000372459 WNT8AQ9H1J5 351 aa26.66■■□□□ 1.86
CTSA-203ENST00000372459 CCDC188H7C350 402 aa26.65■■□□□ 1.86
CTSA-203ENST00000372459 WEE2P0C1S8 567 aa26.65■■□□□ 1.86
CTSA-203ENST00000372459 GRM5P41594 1212 aa26.65■■□□□ 1.86
CTSA-203ENST00000372459 ADAM17P78536 824 aa26.65■■□□□ 1.86
CTSA-203ENST00000372459 SLC7A5Q01650 507 aa26.65■■□□□ 1.86
CTSA-203ENST00000372459 TMEM132DQ14C87 1099 aa26.65■■□□□ 1.86
CTSA-203ENST00000372459 CLUL1Q15846 466 aa26.65■■□□□ 1.86
CTSA-203ENST00000372459 DCAF12L1Q5VU92 463 aa26.65■■□□□ 1.86
CTSA-203ENST00000372459 RUFY4Q6ZNE9 571 aa26.65■■□□□ 1.86
CTSA-203ENST00000372459 CATSPER4Q7RTX7 472 aa26.65■■□□□ 1.86
CTSA-203ENST00000372459 PASD1Q8IV76 773 aa26.65■■□□□ 1.86
CTSA-203ENST00000372459 VCPIP1Q96JH7 1222 aa26.65■■□□□ 1.86
CTSA-203ENST00000372459 ZSWIM1Q9BR11 485 aa26.65■■□□□ 1.86
CTSA-203ENST00000372459 NXF1Q9UBU9 619 aaKnown RBP26.65■■□□□ 1.86
CTSA-203ENST00000372459 MAP2K7O14733 419 aa26.64■■□□□ 1.86
CTSA-203ENST00000372459 ITGB3P05106 788 aa26.64■■□□□ 1.86
CTSA-203ENST00000372459 CFHP08603 1231 aa26.64■■□□□ 1.86
CTSA-203ENST00000372459 CTGFP29279 349 aa26.64■■□□□ 1.86
CTSA-203ENST00000372459 ATICP31939 592 aa26.64■■□□□ 1.86
CTSA-203ENST00000372459 FSCN1Q16658 493 aaKnown RBP26.64■■□□□ 1.86
CTSA-203ENST00000372459 LIN9Q5TKA1 542 aa26.64■■□□□ 1.86
CTSA-203ENST00000372459 NT5DC4Q86YG4 428 aa26.64■■□□□ 1.86
CTSA-203ENST00000372459 PHF13Q86YI8 300 aaPredicted RBP26.64■■□□□ 1.86
CTSA-203ENST00000372459 CD302Q8IX05 232 aa26.64■■□□□ 1.86
CTSA-203ENST00000372459 PPP1R13LQ8WUF5 828 aa26.64■■□□□ 1.86
CTSA-203ENST00000372459 NAP1L3Q99457 506 aaPredicted RBP26.64■■□□□ 1.86
CTSA-203ENST00000372459 C2CD2Q9Y426 696 aa26.64■■□□□ 1.86
CTSA-203ENST00000372459 KRIT1O00522 736 aa26.64■■□□□ 1.85
CTSA-203ENST00000372459 RRM1P23921 792 aa26.64■■□□□ 1.85
CTSA-203ENST00000372459 MRPS25P82663 173 aaKnown RBP26.64■■□□□ 1.85
CTSA-203ENST00000372459 SMC1AQ14683 1233 aaKnown RBP26.64■■□□□ 1.85
CTSA-203ENST00000372459 BTBD6Q96KE9 485 aa26.64■■□□□ 1.85
CTSA-203ENST00000372459 OSMRQ99650 979 aa26.64■■□□□ 1.85
CTSA-203ENST00000372459 SPOPO43791 374 aa26.63■■□□□ 1.85
CTSA-203ENST00000372459 FCGRTP55899 365 aa26.63■■□□□ 1.85
CTSA-203ENST00000372459 WDR72Q3MJ13 1102 aa26.63■■□□□ 1.85
CTSA-203ENST00000372459 ALG3Q92685 438 aa26.63■■□□□ 1.85
CTSA-203ENST00000372459 RNPC3Q96LT9 517 aaKnown RBP26.63■■□□□ 1.85
CTSA-203ENST00000372459 AP1M1Q9BXS5 423 aa26.63■■□□□ 1.85
CTSA-203ENST00000372459 BCO2Q9BYV7 579 aa26.63■■□□□ 1.85
CTSA-203ENST00000372459 ADAM22Q9P0K1 906 aa26.63■■□□□ 1.85
CTSA-203ENST00000372459 ANAPC7Q9UJX3 599 aa26.63■■□□□ 1.85
CTSA-203ENST00000372459 POLIQ9UNA4 740 aa26.63■■□□□ 1.85
CTSA-203ENST00000372459 FGGP02679 453 aa26.62■■□□□ 1.85
CTSA-203ENST00000372459 DARSP14868 501 aaKnown RBP26.62■■□□□ 1.85
CTSA-203ENST00000372459 HOXA11P31270 313 aaPredicted RBP26.62■■□□□ 1.85
CTSA-203ENST00000372459 HIC1Q14526 733 aa26.62■■□□□ 1.85
CTSA-203ENST00000372459 ZNF394Q53GI3 561 aa26.62■■□□□ 1.85
CTSA-203ENST00000372459 SLC27A1Q6PCB7 646 aa26.62■■□□□ 1.85
CTSA-203ENST00000372459 KLHL7Q8IXQ5 586 aa26.62■■□□□ 1.85
CTSA-203ENST00000372459 DNAJB3Q8WWF6 145 aa26.62■■□□□ 1.85
CTSA-203ENST00000372459 CD101Q93033 1021 aa26.62■■□□□ 1.85
CTSA-203ENST00000372459 C11orf70Q9BRQ4 267 aa26.62■■□□□ 1.85
CTSA-203ENST00000372459 VRTNQ9H8Y1 702 aa26.62■■□□□ 1.85
CTSA-203ENST00000372459 CDHR5Q9HBB8 845 aa26.62■■□□□ 1.85
CTSA-203ENST00000372459 CCDC66A2RUB6 948 aa26.62■■□□□ 1.85
CTSA-203ENST00000372459 C17orf102A2RUQ5 167 aa26.62■■□□□ 1.85
CTSA-203ENST00000372459 NPTXRO95502 500 aa26.62■■□□□ 1.85
CTSA-203ENST00000372459 LSM8O95777 96 aaKnown RBP26.62■■□□□ 1.85
CTSA-203ENST00000372459 TNFRSF8P28908 595 aa26.62■■□□□ 1.85
CTSA-203ENST00000372459 OAS2P29728 719 aaKnown RBP26.62■■□□□ 1.85
CTSA-203ENST00000372459 C1QBPQ07021 282 aaKnown RBP26.62■■□□□ 1.85
CTSA-203ENST00000372459 NOTUMQ6P988 496 aa26.62■■□□□ 1.85
CTSA-203ENST00000372459 CXorf38Q8TB03 319 aa26.62■■□□□ 1.85
CTSA-203ENST00000372459 HHIPL1Q96JK4 782 aa26.62■■□□□ 1.85
CTSA-203ENST00000372459 ITGA11Q9UKX5 1188 aa26.62■■□□□ 1.85
CTSA-203ENST00000372459 TREHO43280 583 aa26.61■■□□□ 1.85
CTSA-203ENST00000372459 DUSP11O75319 330 aaKnown RBP26.61■■□□□ 1.85
CTSA-203ENST00000372459 GNAT1P11488 350 aa26.61■■□□□ 1.85
CTSA-203ENST00000372459 CTNNA2P26232 953 aa26.61■■□□□ 1.85
CTSA-203ENST00000372459 SSTR3P32745 418 aaPredicted RBP26.61■■□□□ 1.85
CTSA-203ENST00000372459 IFT20Q8IY31 132 aa26.61■■□□□ 1.85
CTSA-203ENST00000372459 KRT35Q92764 455 aa26.61■■□□□ 1.85
CTSA-203ENST00000372459 ZIC5Q96T25 663 aa26.61■■□□□ 1.85
CTSA-203ENST00000372459 PLEKHA5Q9HAU0 1116 aa26.61■■□□□ 1.85
CTSA-203ENST00000372459 MRPL47Q9HD33 250 aaKnown RBP26.61■■□□□ 1.85
CTSA-203ENST00000372459 HEXIM1O94992 359 aaKnown RBP26.6■■□□□ 1.85
CTSA-203ENST00000372459 P4HA1P13674 534 aa26.6■■□□□ 1.85
CTSA-203ENST00000372459 EIF4BP23588 611 aaKnown RBP26.6■■□□□ 1.85
CTSA-203ENST00000372459 BRD2P25440 801 aaKnown RBP26.6■■□□□ 1.85
CTSA-203ENST00000372459 CTNNA1P35221 906 aaKnown RBP26.6■■□□□ 1.85
CTSA-203ENST00000372459 PURAQ00577 322 aaKnown RBP26.6■■□□□ 1.85
CTSA-203ENST00000372459 CASP8Q14790 479 aa26.6■■□□□ 1.85
CTSA-203ENST00000372459 HINFPQ9BQA5 517 aa26.6■■□□□ 1.85
CTSA-203ENST00000372459 CITO14578 2027 aa26.6■■□□□ 1.85
CTSA-203ENST00000372459 MYBL2P10244 700 aa26.6■■□□□ 1.85
CTSA-203ENST00000372459 AXLP30530 894 aa26.6■■□□□ 1.85
CTSA-203ENST00000372459 POLR2BP30876 1174 aaKnown RBP26.6■■□□□ 1.85
CTSA-203ENST00000372459 PSMC4P43686 418 aa26.6■■□□□ 1.85
CTSA-203ENST00000372459 PEX5P50542 639 aa26.6■■□□□ 1.85
CTSA-203ENST00000372459 C7orf31Q8N865 590 aa26.6■■□□□ 1.85
CTSA-203ENST00000372459 KIF12Q96FN5 646 aa26.6■■□□□ 1.85
CTSA-203ENST00000372459 ZNF518BQ9C0D4 1074 aa26.6■■□□□ 1.85
CTSA-203ENST00000372459 PCDHGC3Q9UN70 934 aa26.6■■□□□ 1.85
CTSA-203ENST00000372459 SCINQ9Y6U3 715 aa26.6■■□□□ 1.85
CTSA-203ENST00000372459 A0A0U1RQG5 324 aaPredicted RBP26.59■■□□□ 1.85
CTSA-203ENST00000372459 RAD51CO43502 376 aa26.59■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms