RNA–Protein interactions for RNA: ENST00000372447.7

C9orf78-201, Transcript of chromosome 9 open reading frame 78, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf78, Length 1,795 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-201ENST00000372447 SNTG2Q9NY99 539 aa17.23■□□□□ 0.35
C9orf78-201ENST00000372447 SNX12Q9UMY4 172 aa17.23■□□□□ 0.35
C9orf78-201ENST00000372447 PCDHB7Q9Y5E2 793 aa17.23■□□□□ 0.35
C9orf78-201ENST00000372447 BUB1O43683 1085 aa17.22■□□□□ 0.35
C9orf78-201ENST00000372447 FAM189A1O60320 539 aa17.22■□□□□ 0.35
C9orf78-201ENST00000372447 GFPT2O94808 682 aa17.22■□□□□ 0.35
C9orf78-201ENST00000372447 PRLRP16471 622 aa17.22■□□□□ 0.35
C9orf78-201ENST00000372447 GARTP22102 1010 aa17.22■□□□□ 0.35
C9orf78-201ENST00000372447 AKAP5P24588 427 aa17.22■□□□□ 0.35
C9orf78-201ENST00000372447 NAP1L1P55209 391 aaKnown RBP17.22■□□□□ 0.35
C9orf78-201ENST00000372447 CKAP4Q07065 602 aaKnown RBP17.22■□□□□ 0.35
C9orf78-201ENST00000372447 SNRNP35Q16560 246 aaKnown RBP17.22■□□□□ 0.35
C9orf78-201ENST00000372447 APBB1IPQ7Z5R6 666 aaPredicted RBP17.22■□□□□ 0.35
C9orf78-201ENST00000372447 PLEKHO2Q8TD55 490 aa17.22■□□□□ 0.35
C9orf78-201ENST00000372447 APOL6Q9BWW8 343 aa17.22■□□□□ 0.35
C9orf78-201ENST00000372447 PACSIN1Q9BY11 444 aa17.22■□□□□ 0.35
C9orf78-201ENST00000372447 ZNF446Q9NWS9 450 aa17.22■□□□□ 0.35
C9orf78-201ENST00000372447 NAGPAQ9UK23 515 aa17.22■□□□□ 0.35
C9orf78-201ENST00000372447 AGO2Q9UKV8 859 aaKnown RBP17.22■□□□□ 0.35
C9orf78-201ENST00000372447 GOLGA8IPA6NC78 632 aa17.21■□□□□ 0.35
C9orf78-201ENST00000372447 GOLGA8JA6NMD2 632 aa17.21■□□□□ 0.35
C9orf78-201ENST00000372447 BTNL10A8MVZ5 291 aa17.21■□□□□ 0.35
C9orf78-201ENST00000372447 PMM2O15305 246 aa17.21■□□□□ 0.35
C9orf78-201ENST00000372447 ADRB2P07550 413 aa17.21■□□□□ 0.35
C9orf78-201ENST00000372447 PNMA6AP0CW24 399 aaPredicted RBP17.21■□□□□ 0.35
C9orf78-201ENST00000372447 GCLMP48507 274 aa17.21■□□□□ 0.35
C9orf78-201ENST00000372447 ZBTB41Q5SVQ8 909 aa17.21■□□□□ 0.35
C9orf78-201ENST00000372447 PHLDB3Q6NSJ2 640 aa17.21■□□□□ 0.35
C9orf78-201ENST00000372447 FAM117BQ6P1L5 589 aa17.21■□□□□ 0.35
C9orf78-201ENST00000372447 ALKBH5Q6P6C2 394 aaKnown RBP17.21■□□□□ 0.35
C9orf78-201ENST00000372447 AGMOQ6ZNB7 445 aa17.21■□□□□ 0.35
C9orf78-201ENST00000372447 CBWD2Q8IUF1 395 aa17.21■□□□□ 0.35
C9orf78-201ENST00000372447 NPAS4Q8IUM7 802 aa17.21■□□□□ 0.35
C9orf78-201ENST00000372447 GPR88Q9GZN0 384 aa17.21■□□□□ 0.35
C9orf78-201ENST00000372447 ANKZF1Q9H8Y5 726 aa17.21■□□□□ 0.35
C9orf78-201ENST00000372447 LRFN2Q9ULH4 789 aa17.21■□□□□ 0.35
C9orf78-201ENST00000372447 OGTO15294 1046 aa17.2■□□□□ 0.34
C9orf78-201ENST00000372447 CCDC172P0C7W6 258 aa17.2■□□□□ 0.34
C9orf78-201ENST00000372447 STAG3L1P0CL83 205 aa17.2■□□□□ 0.34
C9orf78-201ENST00000372447 FGFR1P11362 822 aa17.2■□□□□ 0.34
C9orf78-201ENST00000372447 ITGA4P13612 1032 aa17.2■□□□□ 0.34
C9orf78-201ENST00000372447 ATP2A2P16615 1042 aaKnown RBP17.2■□□□□ 0.34
C9orf78-201ENST00000372447 TNFSF9P41273 254 aa17.2■□□□□ 0.34
C9orf78-201ENST00000372447 GRM5P41594 1212 aa17.2■□□□□ 0.34
C9orf78-201ENST00000372447 ACOT2P49753 483 aa17.2■□□□□ 0.34
C9orf78-201ENST00000372447 BMS1Q14692 1282 aaKnown RBP17.2■□□□□ 0.34
C9orf78-201ENST00000372447 EPC2Q52LR7 807 aa17.2■□□□□ 0.34
C9orf78-201ENST00000372447 TMCO3Q6UWJ1 677 aa17.2■□□□□ 0.34
C9orf78-201ENST00000372447 TDHQ8IZJ6 230 aa17.2■□□□□ 0.34
C9orf78-201ENST00000372447 PHOSPHO2Q8TCD6 241 aa17.2■□□□□ 0.34
C9orf78-201ENST00000372447 PGBD4Q96DM1 585 aa17.2■□□□□ 0.34
C9orf78-201ENST00000372447 SAAL1Q96ER3 474 aa17.2■□□□□ 0.34
C9orf78-201ENST00000372447 RPGRIP1Q96KN7 1286 aa17.2■□□□□ 0.34
C9orf78-201ENST00000372447 CAPZA3Q96KX2 299 aa17.2■□□□□ 0.34
C9orf78-201ENST00000372447 MMS19Q96T76 1030 aa17.2■□□□□ 0.34
C9orf78-201ENST00000372447 PARP2Q9UGN5 583 aa17.2■□□□□ 0.34
C9orf78-201ENST00000372447 NENFQ9UMX5 172 aa17.2■□□□□ 0.34
C9orf78-201ENST00000372447 ATP8B3O60423 1300 aa17.2■□□□□ 0.34
C9orf78-201ENST00000372447 ZNF185O15231 689 aa17.2■□□□□ 0.34
C9orf78-201ENST00000372447 FAM109BQ6ICB4 259 aaPredicted RBP17.2■□□□□ 0.34
C9orf78-201ENST00000372447 CRELD2Q6UXH1 353 aaPredicted RBP17.2■□□□□ 0.34
C9orf78-201ENST00000372447 MSANTD4Q8NCY6 345 aa17.2■□□□□ 0.34
C9orf78-201ENST00000372447 FBXL18Q96ME1 805 aa17.2■□□□□ 0.34
C9orf78-201ENST00000372447 SLC9A7Q96T83 725 aa17.2■□□□□ 0.34
C9orf78-201ENST00000372447 RNF19AQ9NV58 838 aa17.2■□□□□ 0.34
C9orf78-201ENST00000372447 MEFVO15553 781 aaPredicted RBP17.19■□□□□ 0.34
C9orf78-201ENST00000372447 DGKIO75912 1065 aa17.19■□□□□ 0.34
C9orf78-201ENST00000372447 GJB5O95377 273 aa17.19■□□□□ 0.34
C9orf78-201ENST00000372447 TCP1P17987 556 aaKnown RBP17.19■□□□□ 0.34
C9orf78-201ENST00000372447 MXI1P50539 228 aa17.19■□□□□ 0.34
C9orf78-201ENST00000372447 AFF1P51825 1210 aaKnown RBP17.19■□□□□ 0.34
C9orf78-201ENST00000372447 CLLU1OSQ5K130 101 aa17.19■□□□□ 0.34
C9orf78-201ENST00000372447 HERC6Q8IVU3 1022 aa17.19■□□□□ 0.34
C9orf78-201ENST00000372447 HACE1Q8IYU2 909 aa17.19■□□□□ 0.34
C9orf78-201ENST00000372447 NOA1Q8NC60 698 aaKnown RBP17.19■□□□□ 0.34
C9orf78-201ENST00000372447 ACAP3Q96P50 834 aa17.19■□□□□ 0.34
C9orf78-201ENST00000372447 FAM213AQ9BRX8 229 aa17.19■□□□□ 0.34
C9orf78-201ENST00000372447 TMEM117Q9H0C3 514 aa17.19■□□□□ 0.34
C9orf78-201ENST00000372447 CXCL16Q9H2A7 254 aa17.19■□□□□ 0.34
C9orf78-201ENST00000372447 RNF216Q9NWF9 866 aaPredicted RBP17.19■□□□□ 0.34
C9orf78-201ENST00000372447 CPSF3Q9UKF6 684 aaKnown RBP17.19■□□□□ 0.34
C9orf78-201ENST00000372447 HYOU1Q9Y4L1 999 aa17.19■□□□□ 0.34
C9orf78-201ENST00000372447 GRXCR1A8MXD5 290 aa17.18■□□□□ 0.34
C9orf78-201ENST00000372447 DDX3XO00571 662 aaKnown RBP eCLIP17.18■□□□□ 0.341e-8■■■■■ 42.3
C9orf78-201ENST00000372447 PALMO75781 387 aa17.18■□□□□ 0.34
C9orf78-201ENST00000372447 RECQL4O94761 1208 aa17.18■□□□□ 0.34
C9orf78-201ENST00000372447 LDHAP00338 332 aaKnown RBP17.18■□□□□ 0.34
C9orf78-201ENST00000372447 CLTAP09496 248 aa17.18■□□□□ 0.34
C9orf78-201ENST00000372447 GATMP50440 423 aa17.18■□□□□ 0.34
C9orf78-201ENST00000372447 ARHGAP44Q17R89 818 aa17.18■□□□□ 0.34
C9orf78-201ENST00000372447 CREG2Q8IUH2 290 aa17.18■□□□□ 0.34
C9orf78-201ENST00000372447 GPD1LQ8N335 351 aa17.18■□□□□ 0.34
C9orf78-201ENST00000372447 SLC30A5Q8TAD4 765 aa17.18■□□□□ 0.34
C9orf78-201ENST00000372447 TMC2Q8TDI7 906 aa17.18■□□□□ 0.34
C9orf78-201ENST00000372447 PARD3BQ8TEW8 1205 aa17.18■□□□□ 0.34
C9orf78-201ENST00000372447 MFSD14AQ96MC6 490 aa17.18■□□□□ 0.34
C9orf78-201ENST00000372447 OSBPL9Q96SU4 736 aa17.18■□□□□ 0.34
C9orf78-201ENST00000372447 RSAD1Q9HA92 442 aa17.18■□□□□ 0.34
C9orf78-201ENST00000372447 UBE2TQ9NPD8 197 aaPredicted RBP17.18■□□□□ 0.34
C9orf78-201ENST00000372447 OGFRQ9NZT2 677 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms