RNA–Protein interactions for RNA: ENST00000372246.7

ATG4A-204, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4A, Length 2,501 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-204ENST00000372246 PEX6Q13608 980 aa5.75□□□□□ -1.49
ATG4A-204ENST00000372246 MOGSQ13724 837 aa5.75□□□□□ -1.49
ATG4A-204ENST00000372246 THOC5Q13769 683 aaKnown RBP5.75□□□□□ -1.49
ATG4A-204ENST00000372246 SPARCL1Q14515 664 aa5.75□□□□□ -1.49
ATG4A-204ENST00000372246 P3H1Q32P28 736 aa5.75□□□□□ -1.49
ATG4A-204ENST00000372246 ZFYVE27Q5T4F4 411 aa5.75□□□□□ -1.49
ATG4A-204ENST00000372246 IZUMO3Q5VZ72 239 aa5.75□□□□□ -1.49
ATG4A-204ENST00000372246 PCNX4Q63HM2 1172 aa5.75□□□□□ -1.49
ATG4A-204ENST00000372246 MFSD5Q6N075 450 aa5.75□□□□□ -1.49
ATG4A-204ENST00000372246 RHBDF2Q6PJF5 856 aa5.75□□□□□ -1.49
ATG4A-204ENST00000372246 LVRNQ6Q4G3 990 aa5.75□□□□□ -1.49
ATG4A-204ENST00000372246 PAOXQ6QHF9 649 aa5.75□□□□□ -1.49
ATG4A-204ENST00000372246 NLRP9Q7RTR0 991 aa5.75□□□□□ -1.49
ATG4A-204ENST00000372246 ALYREFQ86V81 257 aaKnown RBP5.75□□□□□ -1.49
ATG4A-204ENST00000372246 CCDC125Q86Z20 511 aa5.75□□□□□ -1.49
ATG4A-204ENST00000372246 ZC3H3Q8IXZ2 948 aaKnown RBP5.75□□□□□ -1.49
ATG4A-204ENST00000372246 SYCP3Q8IZU3 236 aa5.75□□□□□ -1.49
ATG4A-204ENST00000372246 UBL4BQ8N7F7 174 aa5.75□□□□□ -1.49
ATG4A-204ENST00000372246 SYT2Q8N9I0 419 aaPredicted RBP5.75□□□□□ -1.49
ATG4A-204ENST00000372246 ETNPPLQ8TBG4 499 aa5.75□□□□□ -1.49
ATG4A-204ENST00000372246 LRRC8CQ8TDW0 803 aa5.75□□□□□ -1.49
ATG4A-204ENST00000372246 C10orf82Q8WW14 230 aa5.75□□□□□ -1.49
ATG4A-204ENST00000372246 CD101Q93033 1021 aa5.75□□□□□ -1.49
ATG4A-204ENST00000372246 LENG9Q96B70 501 aa5.75□□□□□ -1.49
ATG4A-204ENST00000372246 KREMEN1Q96MU8 473 aa5.75□□□□□ -1.49
ATG4A-204ENST00000372246 TTC1Q99614 292 aa5.75□□□□□ -1.49
ATG4A-204ENST00000372246 EIF2AK1Q9BQI3 630 aaKnown RBP5.75□□□□□ -1.49
ATG4A-204ENST00000372246 TRIM4Q9C037 500 aa5.75□□□□□ -1.49
ATG4A-204ENST00000372246 TMEM117Q9H0C3 514 aa5.75□□□□□ -1.49
ATG4A-204ENST00000372246 VPS37BQ9H9H4 285 aa5.75□□□□□ -1.49
ATG4A-204ENST00000372246 GPRC5CQ9NQ84 441 aa5.75□□□□□ -1.49
ATG4A-204ENST00000372246 AGPAT3Q9NRZ7 376 aa5.75□□□□□ -1.49
ATG4A-204ENST00000372246 KRT82Q9NSB4 513 aa5.75□□□□□ -1.49
ATG4A-204ENST00000372246 TYW1Q9NV66 732 aaKnown RBP5.75□□□□□ -1.49
ATG4A-204ENST00000372246 MARCOQ9UEW3 520 aaPredicted RBP5.75□□□□□ -1.49
ATG4A-204ENST00000372246 ZFP69BQ9UJL9 534 aa5.75□□□□□ -1.49
ATG4A-204ENST00000372246 ANAPC7Q9UJX3 599 aa5.75□□□□□ -1.49
ATG4A-204ENST00000372246 PCDHGB4Q9UN71 923 aa5.75□□□□□ -1.49
ATG4A-204ENST00000372246 PCDHGB5Q9Y5G0 923 aa5.75□□□□□ -1.49
ATG4A-204ENST00000372246 CEP350Q5VT06 3117 aa5.74□□□□□ -1.49
ATG4A-204ENST00000372246 SMCHD1A6NHR9 2005 aa5.74□□□□□ -1.49
ATG4A-204ENST00000372246 PNMA6FA0A0J9YX94 578 aa5.74□□□□□ -1.49
ATG4A-204ENST00000372246 CCDC195A0A1B0GUA6 201 aa5.74□□□□□ -1.49
ATG4A-204ENST00000372246 EXOC1LA0A1B0GW35 172 aa5.74□□□□□ -1.49
ATG4A-204ENST00000372246 AHCYL1O43865 530 aa5.74□□□□□ -1.49
ATG4A-204ENST00000372246 SORBS3O60504 671 aa5.74□□□□□ -1.49
ATG4A-204ENST00000372246 FAM13AO94988 1023 aa5.74□□□□□ -1.49
ATG4A-204ENST00000372246 ASMTLO95671 621 aa5.74□□□□□ -1.49
ATG4A-204ENST00000372246 BAG2O95816 211 aa5.74□□□□□ -1.49
ATG4A-204ENST00000372246 TOP3BO95985 862 aaKnown RBP5.74□□□□□ -1.49
ATG4A-204ENST00000372246 PLS3P13797 630 aa5.74□□□□□ -1.49
ATG4A-204ENST00000372246 ATF2P15336 505 aa5.74□□□□□ -1.49
ATG4A-204ENST00000372246 KRT4P19013 534 aa5.74□□□□□ -1.49
ATG4A-204ENST00000372246 TM4SF1P30408 202 aa5.74□□□□□ -1.49
ATG4A-204ENST00000372246 ALDH3A1P30838 453 aa5.74□□□□□ -1.49
ATG4A-204ENST00000372246 SSTR1P30872 391 aa5.74□□□□□ -1.49
ATG4A-204ENST00000372246 PSMC2P35998 433 aaKnown RBP5.74□□□□□ -1.49
ATG4A-204ENST00000372246 TAS2R40P59535 323 aa5.74□□□□□ -1.49
ATG4A-204ENST00000372246 GPC5P78333 572 aa5.74□□□□□ -1.49
ATG4A-204ENST00000372246 ICA1Q05084 483 aa5.74□□□□□ -1.49
ATG4A-204ENST00000372246 NFIAQ12857 509 aa5.74□□□□□ -1.49
ATG4A-204ENST00000372246 SLMAPQ14BN4 828 aa5.74□□□□□ -1.49
ATG4A-204ENST00000372246 ZRSR2Q15696 482 aaKnown RBP5.74□□□□□ -1.49
ATG4A-204ENST00000372246 CTC1Q2NKJ3 1217 aa5.74□□□□□ -1.49
ATG4A-204ENST00000372246 WDR72Q3MJ13 1102 aa5.74□□□□□ -1.49
ATG4A-204ENST00000372246 PARP10Q53GL7 1025 aa5.74□□□□□ -1.49
ATG4A-204ENST00000372246 MFSD14BQ5SR56 506 aa5.74□□□□□ -1.49
ATG4A-204ENST00000372246 ODR4Q5SWX8 454 aa5.74□□□□□ -1.49
ATG4A-204ENST00000372246 RNF43Q68DV7 783 aa5.74□□□□□ -1.49
ATG4A-204ENST00000372246 TXNRD3NBQ6F5E7 133 aa5.74□□□□□ -1.49
ATG4A-204ENST00000372246 C4orf50Q6ZRC1 276 aa5.74□□□□□ -1.49
ATG4A-204ENST00000372246 GSTA5Q7RTV2 222 aa5.74□□□□□ -1.49
ATG4A-204ENST00000372246 CLNKQ7Z7G1 428 aa5.74□□□□□ -1.49
ATG4A-204ENST00000372246 GALNT15Q8N3T1 639 aa5.74□□□□□ -1.49
ATG4A-204ENST00000372246 PSPC1Q8WXF1 523 aaKnown RBP5.74□□□□□ -1.49
ATG4A-204ENST00000372246 MAML1Q92585 1016 aa5.74□□□□□ -1.49
ATG4A-204ENST00000372246 MAGEB18Q96M61 343 aa5.74□□□□□ -1.49
ATG4A-204ENST00000372246 FGD4Q96M96 766 aa5.74□□□□□ -1.49
ATG4A-204ENST00000372246 FIZ1Q96SL8 496 aa5.74□□□□□ -1.49
ATG4A-204ENST00000372246 RBM15Q96T37 977 aaKnown RBP eCLIP5.74□□□□□ -1.49
ATG4A-204ENST00000372246 MECRQ9BV79 373 aa5.74□□□□□ -1.49
ATG4A-204ENST00000372246 MOV10L1Q9BXT6 1211 aaKnown RBP5.74□□□□□ -1.49
ATG4A-204ENST00000372246 TRABDQ9H4I3 376 aa5.74□□□□□ -1.49
ATG4A-204ENST00000372246 ETNK2Q9NVF9 386 aa5.74□□□□□ -1.49
ATG4A-204ENST00000372246 HEY2Q9UBP5 337 aa5.74□□□□□ -1.49
ATG4A-204ENST00000372246 RABGAP1Q9Y3P9 1069 aa5.74□□□□□ -1.49
ATG4A-204ENST00000372246 HEMK1Q9Y5R4 338 aaPredicted RBP5.74□□□□□ -1.49
ATG4A-204ENST00000372246 ROBO1Q9Y6N7 1651 aa5.74□□□□□ -1.49
ATG4A-204ENST00000372246 FRMPD4Q14CM0 1322 aa5.74□□□□□ -1.49
ATG4A-204ENST00000372246 SYNGAP1Q96PV0 1343 aa5.74□□□□□ -1.49
ATG4A-204ENST00000372246 MYH14Q7Z406 1995 aaKnown RBP5.74□□□□□ -1.49
ATG4A-204ENST00000372246 FAM237BA0A1B0GVD1 139 aa5.74□□□□□ -1.49
ATG4A-204ENST00000372246 FAM47DPA6NHR8 397 aa5.74□□□□□ -1.49
ATG4A-204ENST00000372246 PODXLO00592 558 aa5.74□□□□□ -1.49
ATG4A-204ENST00000372246 ZBTB5O15062 677 aa5.74□□□□□ -1.49
ATG4A-204ENST00000372246 FAM155BO75949 473 aa5.74□□□□□ -1.49
ATG4A-204ENST00000372246 GDF11O95390 407 aa5.74□□□□□ -1.49
ATG4A-204ENST00000372246 BAG3O95817 575 aa5.74□□□□□ -1.49
ATG4A-204ENST00000372246 IFNB1P01574 187 aa5.74□□□□□ -1.49
ATG4A-204ENST00000372246 NPEPPSP55786 919 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms