RNA–Protein interactions for RNA: ENST00000372232.7

ATG4A-203, Transcript of autophagy related 4A cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4A, Length 2,315 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-203ENST00000372232 HOXD10P28358 340 aa9.38□□□□□ -0.91
ATG4A-203ENST00000372232 RGS2P41220 211 aa9.38□□□□□ -0.91
ATG4A-203ENST00000372232 GALK1P51570 392 aa9.38□□□□□ -0.91
ATG4A-203ENST00000372232 DMPKQ09013 629 aa9.38□□□□□ -0.91
ATG4A-203ENST00000372232 PAK1Q13153 545 aa9.38□□□□□ -0.91
ATG4A-203ENST00000372232 DCTN2Q13561 401 aaKnown RBP9.38□□□□□ -0.91
ATG4A-203ENST00000372232 KRT31Q15323 416 aa9.38□□□□□ -0.91
ATG4A-203ENST00000372232 CFAP221Q4G0U5 840 aa9.38□□□□□ -0.91
ATG4A-203ENST00000372232 ASPRV1Q53RT3 343 aa9.38□□□□□ -0.91
ATG4A-203ENST00000372232 HHIPL2Q6UWX4 724 aa9.38□□□□□ -0.91
ATG4A-203ENST00000372232 SLC7A5P1Q8MH63 180 aa9.38□□□□□ -0.91
ATG4A-203ENST00000372232 REXO1Q8N1G1 1221 aaKnown RBP9.38□□□□□ -0.91
ATG4A-203ENST00000372232 ZNF511Q8NB15 262 aa9.38□□□□□ -0.91
ATG4A-203ENST00000372232 GPR152Q8TDT2 470 aa9.38□□□□□ -0.91
ATG4A-203ENST00000372232 LRRC8CQ8TDW0 803 aa9.38□□□□□ -0.91
ATG4A-203ENST00000372232 GAB3Q8WWW8 586 aa9.38□□□□□ -0.91
ATG4A-203ENST00000372232 INPP5DQ92835 1189 aa9.38□□□□□ -0.91
ATG4A-203ENST00000372232 CASP10Q92851 521 aa9.38□□□□□ -0.91
ATG4A-203ENST00000372232 AK8Q96MA6 479 aa9.38□□□□□ -0.91
ATG4A-203ENST00000372232 DHX36Q9H2U1 1008 aaKnown RBP9.38□□□□□ -0.91
ATG4A-203ENST00000372232 NDUFA13Q9P0J0 144 aa9.38□□□□□ -0.91
ATG4A-203ENST00000372232 SCHIP1Q9P0W5 487 aaPredicted RBP9.38□□□□□ -0.91
ATG4A-203ENST00000372232 PCDH10Q9P2E7 1040 aa9.38□□□□□ -0.91
ATG4A-203ENST00000372232 FBXO9Q9UK97 447 aaPredicted RBP9.38□□□□□ -0.91
ATG4A-203ENST00000372232 ARL2BPQ9Y2Y0 163 aa9.38□□□□□ -0.91
ATG4A-203ENST00000372232 DUSP10Q9Y6W6 482 aa9.38□□□□□ -0.91
ATG4A-203ENST00000372232 FRMPD2Q68DX3 1309 aaPredicted RBP9.38□□□□□ -0.91
ATG4A-203ENST00000372232 TTC26A0AVF1 554 aa9.38□□□□□ -0.91
ATG4A-203ENST00000372232 hCG_1984214I3L0E3 225 aa9.38□□□□□ -0.91
ATG4A-203ENST00000372232 KLF4O43474 513 aa9.38□□□□□ -0.91
ATG4A-203ENST00000372232 MGEA5O60502 916 aa9.38□□□□□ -0.91
ATG4A-203ENST00000372232 CDK4P11802 303 aa9.38□□□□□ -0.91
ATG4A-203ENST00000372232 PRCPP42785 496 aa9.38□□□□□ -0.91
ATG4A-203ENST00000372232 COPB1P53618 953 aaKnown RBP9.38□□□□□ -0.91
ATG4A-203ENST00000372232 EIF6P56537 245 aaKnown RBP9.38□□□□□ -0.91
ATG4A-203ENST00000372232 SPAG1Q07617 926 aa9.38□□□□□ -0.91
ATG4A-203ENST00000372232 KIF22Q14807 665 aa9.38□□□□□ -0.91
ATG4A-203ENST00000372232 KRT71Q3SY84 523 aa9.38□□□□□ -0.91
ATG4A-203ENST00000372232 ODR4Q5SWX8 454 aa9.38□□□□□ -0.91
ATG4A-203ENST00000372232 SNX30Q5VWJ9 437 aa9.38□□□□□ -0.91
ATG4A-203ENST00000372232 APOBEC3HQ6NTF7 200 aaKnown RBP9.38□□□□□ -0.91
ATG4A-203ENST00000372232 CDC42EP5Q6NZY7 148 aa9.38□□□□□ -0.91
ATG4A-203ENST00000372232 ANKRD13BQ86YJ7 626 aa9.38□□□□□ -0.91
ATG4A-203ENST00000372232 TREML1Q86YW5 311 aa9.38□□□□□ -0.91
ATG4A-203ENST00000372232 LRRC47Q8N1G4 583 aaKnown RBP9.38□□□□□ -0.91
ATG4A-203ENST00000372232 RIBC1Q8N443 379 aaPredicted RBP9.38□□□□□ -0.91
ATG4A-203ENST00000372232 ZNF713Q8N859 430 aaPredicted RBP9.38□□□□□ -0.91
ATG4A-203ENST00000372232 TBCKQ8TEA7 893 aa9.38□□□□□ -0.91
ATG4A-203ENST00000372232 LRRC15Q8TF66 581 aa9.38□□□□□ -0.91
ATG4A-203ENST00000372232 ITPKCQ96DU7 683 aa9.38□□□□□ -0.91
ATG4A-203ENST00000372232 MTFR1LQ9H019 292 aa9.38□□□□□ -0.91
ATG4A-203ENST00000372232 ASCC2Q9H1I8 757 aaPredicted RBP9.38□□□□□ -0.91
ATG4A-203ENST00000372232 SH2D4AQ9H788 454 aa9.38□□□□□ -0.91
ATG4A-203ENST00000372232 RAB6BQ9NRW1 208 aa9.38□□□□□ -0.91
ATG4A-203ENST00000372232 PRKAG3Q9UGI9 489 aa9.38□□□□□ -0.91
ATG4A-203ENST00000372232 PNMA2Q9UL42 364 aa9.38□□□□□ -0.91
ATG4A-203ENST00000372232 GDAQ9Y2T3 454 aa9.38□□□□□ -0.91
ATG4A-203ENST00000372232 MYH1P12882 1939 aa9.37□□□□□ -0.91
ATG4A-203ENST00000372232 GRID2IPA4D2P6 1211 aa9.37□□□□□ -0.91
ATG4A-203ENST00000372232 KLRC4O43908 158 aa9.37□□□□□ -0.91
ATG4A-203ENST00000372232 TTLL1O95922 423 aa9.37□□□□□ -0.91
ATG4A-203ENST00000372232 MMP10P09238 476 aa9.37□□□□□ -0.91
ATG4A-203ENST00000372232 USP17L7P0C7H9 530 aa9.37□□□□□ -0.91
ATG4A-203ENST00000372232 HSPA8P11142 646 aaKnown RBP9.37□□□□□ -0.91
ATG4A-203ENST00000372232 SHMT1P34896 483 aa9.37□□□□□ -0.91
ATG4A-203ENST00000372232 EIF3BP55884 814 aaKnown RBP9.37□□□□□ -0.91
ATG4A-203ENST00000372232 FOXK2Q01167 660 aa9.37□□□□□ -0.91
ATG4A-203ENST00000372232 SF3A3Q12874 501 aaKnown RBP eCLIP9.37□□□□□ -0.91
ATG4A-203ENST00000372232 NFX1Q12986 1120 aaKnown RBP9.37□□□□□ -0.91
ATG4A-203ENST00000372232 ORC2Q13416 577 aaPredicted RBP9.37□□□□□ -0.91
ATG4A-203ENST00000372232 DGKZQ13574 1117 aa9.37□□□□□ -0.91
ATG4A-203ENST00000372232 RAB33AQ14088 237 aa9.37□□□□□ -0.91
ATG4A-203ENST00000372232 Q6ZNX1 250 aa9.37□□□□□ -0.91
ATG4A-203ENST00000372232 UNC13DQ70J99 1090 aa9.37□□□□□ -0.91
ATG4A-203ENST00000372232 LAPTM4BQ86VI4 370 aa9.37□□□□□ -0.91
ATG4A-203ENST00000372232 CLEC10AQ8IUN9 316 aa9.37□□□□□ -0.91
ATG4A-203ENST00000372232 LILRB2Q8N423 598 aa9.37□□□□□ -0.91
ATG4A-203ENST00000372232 UHMK1Q8TAS1 419 aaKnown RBP9.37□□□□□ -0.91
ATG4A-203ENST00000372232 TRPC4APQ8TEL6 797 aa9.37□□□□□ -0.91
ATG4A-203ENST00000372232 MASTLQ96GX5 879 aa9.37□□□□□ -0.91
ATG4A-203ENST00000372232 KCTD15Q96SI1 283 aaPredicted RBP9.37□□□□□ -0.91
ATG4A-203ENST00000372232 PLIN2Q99541 437 aa9.37□□□□□ -0.91
ATG4A-203ENST00000372232 SPOCK3Q9BQ16 436 aa9.37□□□□□ -0.91
ATG4A-203ENST00000372232 SPON2Q9BUD6 331 aa9.37□□□□□ -0.91
ATG4A-203ENST00000372232 DRC3Q9H069 523 aa9.37□□□□□ -0.91
ATG4A-203ENST00000372232 TPK1Q9H3S4 243 aa9.37□□□□□ -0.91
ATG4A-203ENST00000372232 CUEDC2Q9H467 287 aa9.37□□□□□ -0.91
ATG4A-203ENST00000372232 EURLQ9NYK6 297 aa9.37□□□□□ -0.91
ATG4A-203ENST00000372232 CAPN11Q9UMQ6 739 aa9.37□□□□□ -0.91
ATG4A-203ENST00000372232 PRELID1Q9Y255 219 aa9.37□□□□□ -0.91
ATG4A-203ENST00000372232 MYO3BQ8WXR4 1341 aa9.37□□□□□ -0.91
ATG4A-203ENST00000372232 ANKRD31Q8N7Z5 1873 aa9.37□□□□□ -0.91
ATG4A-203ENST00000372232 PASKQ96RG2 1323 aa9.37□□□□□ -0.91
ATG4A-203ENST00000372232 MATN2O00339 956 aa9.37□□□□□ -0.91
ATG4A-203ENST00000372232 ARHGAP33O14559 1287 aa9.37□□□□□ -0.91
ATG4A-203ENST00000372232 AP1B1Q10567 949 aa9.37□□□□□ -0.91
ATG4A-203ENST00000372232 TRADDQ15628 312 aa9.37□□□□□ -0.91
ATG4A-203ENST00000372232 TCP11X2Q5H9J9 407 aa9.37□□□□□ -0.91
ATG4A-203ENST00000372232 INTS6LQ5JSJ4 861 aaKnown RBP9.37□□□□□ -0.91
ATG4A-203ENST00000372232 SPDYCQ5MJ68 293 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms