RNA–Protein interactions for RNA: ENST00000371621.4

PTPN1-201, Transcript of protein tyrosine phosphatase, non-receptor type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN1, Length 4,008 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1-201ENST00000371621 KRT37O76014 449 aa12.38□□□□□ -0.43
PTPN1-201ENST00000371621 CD19P15391 556 aa12.38□□□□□ -0.43
PTPN1-201ENST00000371621 FLOT2Q14254 428 aa12.38□□□□□ -0.43
PTPN1-201ENST00000371621 SLC13A5Q86YT5 568 aaPredicted RBP12.38□□□□□ -0.43
PTPN1-201ENST00000371621 DNAJC10Q8IXB1 793 aa12.38□□□□□ -0.43
PTPN1-201ENST00000371621 LRRC47Q8N1G4 583 aaKnown RBP12.38□□□□□ -0.43
PTPN1-201ENST00000371621 CYGBQ8WWM9 190 aa12.38□□□□□ -0.43
PTPN1-201ENST00000371621 BRIP1Q9BX63 1249 aa12.38□□□□□ -0.43
PTPN1-201ENST00000371621 CALN1Q9BXU9 219 aa12.38□□□□□ -0.43
PTPN1-201ENST00000371621 CCDC134Q9H6E4 229 aa12.38□□□□□ -0.43
PTPN1-201ENST00000371621 IFT172Q9UG01 1749 aa12.38□□□□□ -0.43
PTPN1-201ENST00000371621 CYP26A1O43174 497 aa12.38□□□□□ -0.43
PTPN1-201ENST00000371621 TRMUO75648 421 aaKnown RBP12.38□□□□□ -0.43
PTPN1-201ENST00000371621 PROCP04070 461 aa12.38□□□□□ -0.43
PTPN1-201ENST00000371621 CAPN1P07384 714 aa12.38□□□□□ -0.43
PTPN1-201ENST00000371621 FAM58BPP0C7Q3 252 aa12.38□□□□□ -0.43
PTPN1-201ENST00000371621 CYP2D6P10635 497 aa12.38□□□□□ -0.43
PTPN1-201ENST00000371621 CDH3P22223 829 aa12.38□□□□□ -0.43
PTPN1-201ENST00000371621 SOX5P35711 763 aa12.38□□□□□ -0.43
PTPN1-201ENST00000371621 RAP1GDS1P52306 607 aa12.38□□□□□ -0.43
PTPN1-201ENST00000371621 LPIN1Q14693 890 aa12.38□□□□□ -0.43
PTPN1-201ENST00000371621 CHI3L2Q15782 390 aa12.38□□□□□ -0.43
PTPN1-201ENST00000371621 SGSM1Q2NKQ1 1148 aa12.38□□□□□ -0.43
PTPN1-201ENST00000371621 NT5DC3Q86UY8 548 aa12.38□□□□□ -0.43
PTPN1-201ENST00000371621 KIAA0895Q8NCT3 520 aa12.38□□□□□ -0.43
PTPN1-201ENST00000371621 TCP10LQ8TDR4 215 aa12.38□□□□□ -0.43
PTPN1-201ENST00000371621 SLC5A5Q92911 643 aa12.38□□□□□ -0.43
PTPN1-201ENST00000371621 CADM1Q9BY67 442 aaKnown RBP12.38□□□□□ -0.43
PTPN1-201ENST00000371621 PARVBQ9HBI1 364 aa12.38□□□□□ -0.43
PTPN1-201ENST00000371621 ERVK-5Q9HDB9 667 aa12.38□□□□□ -0.43
PTPN1-201ENST00000371621 RFX7Q2KHR2 1363 aa12.38□□□□□ -0.43
PTPN1-201ENST00000371621 FAM237BA0A1B0GVD1 139 aa12.38□□□□□ -0.43
PTPN1-201ENST00000371621 ARHGEF35A5YM69 484 aa12.38□□□□□ -0.43
PTPN1-201ENST00000371621 TRIM64CA6NLI5 447 aa12.38□□□□□ -0.43
PTPN1-201ENST00000371621 H0YIN7 160 aa12.38□□□□□ -0.43
PTPN1-201ENST00000371621 TAC1P20366 129 aa12.38□□□□□ -0.43
PTPN1-201ENST00000371621 EIF4BP23588 611 aaKnown RBP12.38□□□□□ -0.43
PTPN1-201ENST00000371621 EPC2Q52LR7 807 aa12.38□□□□□ -0.43
PTPN1-201ENST00000371621 MIIPQ5JXC2 388 aa12.38□□□□□ -0.43
PTPN1-201ENST00000371621 TTC33Q6PID6 262 aaPredicted RBP12.38□□□□□ -0.43
PTPN1-201ENST00000371621 CLNKQ7Z7G1 428 aa12.38□□□□□ -0.43
PTPN1-201ENST00000371621 SAPCD2Q86UD0 394 aa12.38□□□□□ -0.43
PTPN1-201ENST00000371621 DGKHQ86XP1 1220 aa12.38□□□□□ -0.43
PTPN1-201ENST00000371621 TGFBRAP1Q8WUH2 860 aa12.38□□□□□ -0.43
PTPN1-201ENST00000371621 SCYL1Q96KG9 808 aa12.38□□□□□ -0.43
PTPN1-201ENST00000371621 ADNPQ9H2P0 1102 aa12.38□□□□□ -0.43
PTPN1-201ENST00000371621 SENP1Q9P0U3 644 aa12.38□□□□□ -0.43
PTPN1-201ENST00000371621 PSMC3IPQ9P2W1 217 aaPredicted RBP12.38□□□□□ -0.43
PTPN1-201ENST00000371621 MOSPD1Q9UJG1 213 aa12.38□□□□□ -0.43
PTPN1-201ENST00000371621 ADGRB2O60241 1585 aa12.38□□□□□ -0.43
PTPN1-201ENST00000371621 C15orf38-AP3S2A0A0A6YYH1 394 aa12.37□□□□□ -0.43
PTPN1-201ENST00000371621 TTLL13PA6NNM8 815 aa12.37□□□□□ -0.43
PTPN1-201ENST00000371621 GNPATO15228 680 aa12.37□□□□□ -0.43
PTPN1-201ENST00000371621 ZMPSTE24O75844 475 aa12.37□□□□□ -0.43
PTPN1-201ENST00000371621 ESRRBO95718 433 aa12.37□□□□□ -0.43
PTPN1-201ENST00000371621 LDHCP07864 332 aa12.37□□□□□ -0.43
PTPN1-201ENST00000371621 ARPC4P59998 168 aa12.37□□□□□ -0.43
PTPN1-201ENST00000371621 ARPINQ7Z6K5 226 aa12.37□□□□□ -0.43
PTPN1-201ENST00000371621 ZCRB1Q8TBF4 217 aaKnown RBP12.37□□□□□ -0.43
PTPN1-201ENST00000371621 TBC1D16Q8TBP0 767 aa12.37□□□□□ -0.43
PTPN1-201ENST00000371621 ARMC7Q9H6L4 198 aa12.37□□□□□ -0.43
PTPN1-201ENST00000371621 ARHGEF37A1IGU5 675 aa12.37□□□□□ -0.43
PTPN1-201ENST00000371621 PDE8AO60658 829 aa12.37□□□□□ -0.43
PTPN1-201ENST00000371621 HSPA4LO95757 839 aa12.37□□□□□ -0.43
PTPN1-201ENST00000371621 PAEPP09466 180 aa12.37□□□□□ -0.43
PTPN1-201ENST00000371621 TNNI1P19237 187 aa12.37□□□□□ -0.43
PTPN1-201ENST00000371621 SERPINB1P30740 379 aa12.37□□□□□ -0.43
PTPN1-201ENST00000371621 CASP2P42575 452 aa12.37□□□□□ -0.43
PTPN1-201ENST00000371621 CTSWP56202 376 aa12.37□□□□□ -0.43
PTPN1-201ENST00000371621 ARL4CP56559 192 aa12.37□□□□□ -0.43
PTPN1-201ENST00000371621 PLOD1Q02809 727 aaPredicted RBP12.37□□□□□ -0.43
PTPN1-201ENST00000371621 HIF1AQ16665 826 aa12.37□□□□□ -0.43
PTPN1-201ENST00000371621 ANKRD23Q86SG2 305 aa12.37□□□□□ -0.43
PTPN1-201ENST00000371621 DDI1Q8WTU0 396 aa12.37□□□□□ -0.43
PTPN1-201ENST00000371621 HPS1Q92902 700 aa12.37□□□□□ -0.43
PTPN1-201ENST00000371621 TLCD1Q96CP7 247 aa12.37□□□□□ -0.43
PTPN1-201ENST00000371621 STX18Q9P2W9 335 aaKnown RBP12.37□□□□□ -0.43
PTPN1-201ENST00000371621 DSEQ9UL01 958 aa12.37□□□□□ -0.43
PTPN1-201ENST00000371621 MYO3BQ8WXR4 1341 aa12.37□□□□□ -0.43
PTPN1-201ENST00000371621 ZBTB39O15060 712 aa12.37□□□□□ -0.43
PTPN1-201ENST00000371621 KRT38O76015 456 aa12.37□□□□□ -0.43
PTPN1-201ENST00000371621 POTEIP0CG38 1075 aa12.37□□□□□ -0.43
PTPN1-201ENST00000371621 VEGFAP15692 232 aaPredicted RBP12.37□□□□□ -0.43
PTPN1-201ENST00000371621 STMN1P16949 149 aa12.37□□□□□ -0.43
PTPN1-201ENST00000371621 VCLP18206 1134 aa12.37□□□□□ -0.43
PTPN1-201ENST00000371621 MARCKSL1P49006 195 aa12.37□□□□□ -0.43
PTPN1-201ENST00000371621 COPAP53621 1224 aa12.37□□□□□ -0.43
PTPN1-201ENST00000371621 CAV1Q03135 178 aa12.37□□□□□ -0.43
PTPN1-201ENST00000371621 FOLH1Q04609 750 aa12.37□□□□□ -0.43
PTPN1-201ENST00000371621 TRAF2Q12933 501 aa12.37□□□□□ -0.43
PTPN1-201ENST00000371621 NCOA4Q13772 614 aa12.37□□□□□ -0.43
PTPN1-201ENST00000371621 POTEGQ6S5H5 508 aa12.37□□□□□ -0.43
PTPN1-201ENST00000371621 OTOAQ7RTW8 1153 aa12.37□□□□□ -0.43
PTPN1-201ENST00000371621 USP37Q86T82 979 aa12.37□□□□□ -0.43
PTPN1-201ENST00000371621 ZNF280CQ8ND82 737 aa12.37□□□□□ -0.43
PTPN1-201ENST00000371621 PHC3Q8NDX5 983 aa12.37□□□□□ -0.43
PTPN1-201ENST00000371621 SPATA20Q8TB22 786 aa12.37□□□□□ -0.43
PTPN1-201ENST00000371621 IMPG2Q9BZV3 1241 aa12.37□□□□□ -0.43
PTPN1-201ENST00000371621 TRIM39Q9HCM9 518 aa12.37□□□□□ -0.43
PTPN1-201ENST00000371621 C20orf96Q9NUD7 363 aaPredicted RBP12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms